EMLSAT00000000582, EMLSAT00000000582-696429 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000582
Unique NameEMLSAT00000000582-696429
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1099supercontigLSalAtl2s1099:41129..41757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000582 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000582EMLSAG00000000582-683348Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002544EMLSAE00000002544-711472Lepeophtheirus salmonisexon
EMLSAE00000002545EMLSAE00000002545-711473Lepeophtheirus salmonisexon
EMLSAE00000002546EMLSAE00000002546-711474Lepeophtheirus salmonisexon
EMLSAE00000002547EMLSAE00000002547-711475Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770322auto770322Lepeophtheirus salmonispolypeptide
EMLSAP00000000582EMLSAP00000000582Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000582

>EMLSAP00000000582 ID=EMLSAP00000000582|Name=EMLSAP00000000582|organism=Lepeophtheirus salmonis|type=polypeptide|length=150bp
MKLIKYIALVQTFLLVVDYCSADTYESPFQGKWCEYCSTRDQVQEFMTKL
EFPRETTATYVNANPVNLTIHYNQTNQMHVIYGQDPTGVDFQLNFPWKAN
RFFTRADFFGKHAYFKSAHYENELFMNFYPDQLGVTLYFKFEFTVDEKDT
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mRNA from alignment at LSalAtl2s1099:41129..41757-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000582-696429 ID=EMLSAT00000000582-696429|Name=EMLSAT00000000582|organism=Lepeophtheirus salmonis|type=mRNA|length=629bp|location=Sequence derived from alignment at LSalAtl2s1099:41129..41757- (Lepeophtheirus salmonis)
ATGAAGTTGATCAAATACATAGCTTTGGTTCAAACCTTTTTACTTGTAGT
AGACTATTGTTCTGCTGATACATAGTAAGTATACTTAGATACCTAATTTG
TATATACAATGTGGGCTTTTTCAGTGAGTCTCCATTTCAAGGAAAGTGGT
GTGAATATTGTAGTACACGAGATCAGGTTCAAGAATTCATGACAAAACTT
GGTATTTTTAGTTCATCTCCACATTACGATCATTTTATTTAACAAAATTT
ATTTTTTACAGAATTCCCGAGAGAAACGACCGCTACATATGTTAATGCAA
ACCCTGTTAATTTAACAATACATTATAATCAAACTAATCAAATGCATGTC
ATCTATGGTCAAGGTAAAACCTAAATATGTCTATATATTTTTTGAGAAGT
AAATGTGAATATTGTTTTCATCCTTTAAGATCCTACCGGAGTGGATTTTC
AATTAAATTTTCCCTGGAAGGCGAATAGATTTTTTACTCGTGCTGACTTC
TTTGGAAAACATGCTTATTTCAAATCTGCACACTACGAAAATGAATTATT
TATGAATTTTTACCCAGATCAATTAGGTGTTACACTTTATTTTAAGTTTG
AATTTACTGTAGATGAAAAAGATACGTAA
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