EMLSAT00000000584, EMLSAT00000000584-696431 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000584
Unique NameEMLSAT00000000584-696431
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:120377..122944 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000584 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000584EMLSAG00000000584-683350Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002554EMLSAE00000002554-711482Lepeophtheirus salmonisexon
EMLSAE00000002555EMLSAE00000002555-711483Lepeophtheirus salmonisexon
EMLSAE00000002556EMLSAE00000002556-711484Lepeophtheirus salmonisexon
EMLSAE00000002557EMLSAE00000002557-711485Lepeophtheirus salmonisexon
EMLSAE00000002558EMLSAE00000002558-711486Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772676auto772676Lepeophtheirus salmonispolypeptide
EMLSAP00000000584EMLSAP00000000584Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000584

>EMLSAP00000000584 ID=EMLSAP00000000584|Name=EMLSAP00000000584|organism=Lepeophtheirus salmonis|type=polypeptide|length=280bp
KEDSLKSVRDQTQNVSSSLDEVNFTTNDKISEKTKKRKKKKKSMILDIIR
DISTENNLSGTFVPLKIKKEHKLDQSLKKEIELEESPKRKYSDIVLKSSF
DEKVDKPSKNGVEKYQRYGSKKKNRKVGKSKEELVNLKVEKLRKDEDKQK
KKMQRFEERHRQQLIDEYMDELEEIQNLKLLEEERALKSFNYDQSREEKA
SEDTIEEVNDNQKYAKVPPEMENKVEGECVAGGPILPKESITTSKSLPMY
QNDPVEXVKNAVLKPITIPAWDATCPSSME
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mRNA from alignment at LSalAtl2s109:120377..122944-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000584-696431 ID=EMLSAT00000000584-696431|Name=EMLSAT00000000584|organism=Lepeophtheirus salmonis|type=mRNA|length=2568bp|location=Sequence derived from alignment at LSalAtl2s109:120377..122944- (Lepeophtheirus salmonis)
AAGGAAGATTCCTTGAAATCCGTTCGTGATCAAACACAAAATGTAAGTTC
GTCTCTAGACGAAGTAAATTTTACAACAAATGATAAAATTTCTGAAAAAA
CTAAAAAGCGCAAAAAAAAGAAAAAAAGTATGATTTTAGATATTATACGT
GATATTTCTACGGAAAATAATTTATCCGGTACCTTTGTGCCTTTAAAAAT
CAAAAAAGAACATAAATTAGATCAATCACTCAAAAAGGAAATAGAATTAG
AAGAAAGCCCCAAAAGAAAATATTCGGATATTGTTTTAAAGTCTAGTTTC
GATGAAAAAGTAGATAAACCCTCTAAAAATGGTGTTGAAAAATATCAAAG
ATATGGTTCTAAGAAAAAAAATAGAAAGGTTGGAAAAAGTAAAGAAGAGC
TTGTAAACCTCAAAGTTGAAAAATTAAGAAAAGATGAGGACAAACAGAAA
AAGAAAATGCAAAGGTTTGAAGAAAGACATAGACAACAATTGATCGACGA
ATATATGGATGAATTAGAGGAGATACAGAATCTAAAATTATTGGAGGAAG
AAAGAGCTTTAAAATCCTTCAACTACGATCAGTCCCGTGAAGAGAAAGCA
AGTGAAGATACAATAGAAGAAGTAAACGATAATCAGAAATACGCTAAGGT
TCCTCCTGAAATGGAAAATAAAGTAGAAGGAGAATGTGTGGCAGGGGGGC
CTATCTTACCTAAAGAAAGTATAACGAGTAAGTTACTTATTTAGCTCAGT
TATTTTCTATGTTAATTGATTAATTCTTTTTATATTACAGCATCCAAATC
ACTACCAATGTATCAAAATGACCCTGTGGAGANTGTAAAAAATGCAGTTT
TAAAACCTATTACTATACCAGCATGGGACGCCACTTGTCCATCCAGCATG
GAATAGATTGGGAAGCATCAAAAAATGATTACAAATATATGATAGCTCAA
ATACCAAGGCGCCTCTGTCAATATTGTAAAAAATATTTTGCAAGTTTGTA
CGTCTCTGTTTTCATCTGCCGTAAATTTGAATTAATTGACTCCTAATATT
TCTTTTTTAAACAGACCCAAACATGCTAAGAATTGTAAAAGCTCTAAGAG
TATTAATTTAAACCAGACCAAAAATAAGTCCGAAACATCACGTCCTTTAA
AGAAATCCCCGGAGGAATCGTACGAAAATTTCGTGGTCCACCTCAGGAAA
ATAATGGCTCCAACTATTGCAGTAAGTTACTCCAACTATGTAACAATTTT
TTTTAAATACTTGGAAGAGGTGGACTCAAACTTTCGTGCTGGCTCCTACT
TTGACAAGGACATTATTCCAACACCTATACCTGCAAATCAAATTCCGGTG
TATGTAATGTACAAAACGTCATCTATGATAGTCAATTTTTCACAGGCATT
GAATTCGTTCATGGACTATACTTTGTGCCTTATGAGAAAGACTGTGGACA
ATAAATTAAGGGCCCGCAGGTGTTTAGTGAMGGAGAWTMTAGCCGATGTA
AAGTTGGAGTTGGCCATGCTGCTTAAAGAACATTCCAAGATGATCTCCAT
TGAAAGCTCGGTAAATATGACTAAAGCAAAAAAAAAAATACAATGAATTA
TAATACAGGGTCATGTGATTCTCTGCCATACGTCCCATAATTGAACTGAT
GNCCATTATTGTACGCAATTGTAAAAGTGCATGTACTTACACATGTTCCT
GTAAGATAACATTTTAATTAATTTAGACAAAGATATGTTTGCTAATAGCT
CTGGGGGGCATTTGGTCTAATTTGTGAGTTCAAACAAAACTGCTTCATCT
AACAATTTCTCTTGAAGAGTTGTAAACCCAAATAGAAACTGAAGGGATGT
GCAACTCTGATTGTTAAAGTTTCTTCCGGGAAGGAGGAGGGTGCTCTCAT
TTCGGAATTTATCAAATTATTAAGGGTAATATTATTGGATTGTGGAACGA
GAGTAGAGTACGGCCCTCAATAAGAAACACTAAGACGACTGGAACAATCC
GAAAGGCATTTTTAACTCTTATTAATATTTATTATACTTTTTTAGGAGTC
TGAACCCGATTGTCTCGAGGAGGTGTTTAGAGATGGCCCTAAGAAAGAGC
CTCCCGAATTGGATGCAGAAAAAATTCCGTCTTCCTCTTCAAAAAAGAAG
AGAAAAAAGTCTGTAAGTTTTATATAAGTTTTTTTAAAATTTAAAATACA
TTAAATTAATGTAATTCTCATTTGATGGAACGATATTATATGTTTCGTGT
CTTCTAAAAATTCCTTTTTAGAGTCTTATAGCCAAATATAAAATTTATGA
CTGTTCAAACTCTGGTTGTAAAACAAGAGGAGTCTGGTTGTCTTTTTTTA
CTCTGGAATTCAATAATTTTTTTAGTGCACTTACCACTCAAATAAACTAT
TCTTTTTTTAGGTGTCCTACCCTCAAGTGGACCCAGAGAAAATAATATCG
TCTTCCTCTCTAAAAAAGAAGCGAAACAAATTTGTAAGTTTAATATTTAA
TACTTATTAAATTAGTATAATTGACATTTTATTTTCAGATCACGAAATCA
ACTGAAATACTACATTAA
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