EMLSAT00000000603, EMLSAT00000000603-696450 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000603
Unique NameEMLSAT00000000603-696450
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:439993..441288 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000603 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000603EMLSAG00000000603-683369Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002621EMLSAE00000002621-711549Lepeophtheirus salmonisexon
EMLSAE00000002622EMLSAE00000002622-711550Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777684auto777684Lepeophtheirus salmonispolypeptide
EMLSAP00000000603EMLSAP00000000603Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000603

>EMLSAP00000000603 ID=EMLSAP00000000603|Name=EMLSAP00000000603|organism=Lepeophtheirus salmonis|type=polypeptide|length=406bp
MEVELHGDEISHFFRHESFADVTIRFSDGELRGHRIVLASVSNYLKKILS
PFEEAILELPDFSISEGRLLFDRIYGLIPHSEIIEPQLSPLVETLKLHRA
LPEEIKAILRRTSFEDSDVSEPEDDAPVETLLKSTYTVAHRRSNNAIKKC
IHCNSSWDDDLKLKNHILIDHNAVVQCSDCELHFDEYAEFEAHREEHYYE
LMQQELPTPPLVETKPVVKKRKKTTSPKKVPIKTTTPVKTGYXPTSPGAF
KCEHCPDKIFESQTILDYHKLRHADSSDSFCCLHCDRKFNSEKGLKYHMN
KHEGVADFLCDDCGXRFITRQKLLNHRRSKHTFERPYVCETCGDAFTRSD
KLIVHIRRAHTGEKPYQCEYCEWRGVDSSALIHHKKKHGPDKMTKTIKRY
VHMPQN
back to top

mRNA from alignment at LSalAtl2s109:439993..441288+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000603-696450 ID=EMLSAT00000000603-696450|Name=EMLSAT00000000603|organism=Lepeophtheirus salmonis|type=mRNA|length=1296bp|location=Sequence derived from alignment at LSalAtl2s109:439993..441288+ (Lepeophtheirus salmonis)
ATGGAGGTTGAGCTGCATGGAGTAGAGACTTCCTCKCCTATATCTACGGA
TCTKCCCRCCAAGACACACTTAGTCCGCGATTCATCCTTTATCAAGGACG
AGATATCCCATTTCTTCCGTCACGAGTCCTTTGCTGATGTGACGATTCGC
TTTTCCGACGGAGAACTCAGAGGACATCGTATCGTTCTGGCCTCCGTGAG
CAATTATCTAAAGAAGATCCTGAGTCCTTTTGAAGAGGCCATCCTGGAGT
TACCTGACTTTTCTATCTCCGAAGGACGTCTTTTATTTGACAGGATCTAC
GGCCTCATTCCTCACTCTGAGATTATTGAGCCTCAACTCAGTCCCTTAGT
CGAGACTCTTAAACTTCATCGTGCTCTCCCTGAAGAAATCAAGGCTATTT
TACGCCGAACGTCATTTGAAGACTCTGATGTATCCGAACCAGAGGATGAT
GCTCCTGTTGAAACCCTCCTCAAGTCCACTTACACAGTTGCGCACCGGCG
CTCAAATAATGCAATTAAAAAATGTATCCATTGTAATTCTTCTTGGGACG
ATGATCTTAAACTCAAGAACCACATTCTTATCGATCATAATGCAGTTGTT
CAATGCTCGGATTGTGAGCTTCATTTCGACGAGTATGCGGAGTTTGAGGC
TCATAGAGAAGAACATTATTATGAACTCATGCAGCAGGAATTACCTACAC
CTCCTCTTGTGGAAACAAAGCCTGTTGTGAAAAAAAGGAAGAAAACGACA
TCTCCAAAGAAAGTTCCCATTAAAACAACAACTCCTGTCAAAACAGGCTA
TAGKCCCACCTCTCCAGGGGCCTTTAAATGTGAACATTGTCCAGATAAAA
TATTTGAAAGTCAGACGATTCTTGACTATCATAAACTCAGACATGCAGAC
AGTAGTGATTCATTTTGCTGTCTCCATTGTGATCGCAAATTTAATTCCGA
GAAGGGTCTTAAATATCATATGAACAAACATGAAGGAGTCGCAGATTTCC
TTTGTGATGATTGTGGAAGMCGTTTTATCACTCGACAAAAGCTACTCAAT
CATAGACGATCGAAACATACTTTTGAAAGACCTTATGTGTGTGAGACCTG
CGGAGACGCCTTCACACGTTCAGACAAACTCATTGTTCATATAAGAAGAG
CTCACACGGGCGAGAAACCGTATCAGTGCGAATACTGCGAATGGAGAGGT
GTAGACTCCAGTGCCTTGATTCATCACAAAAAGAAACATGGACCTGATAA
AATGACTAAAACTATCAAAAGATATGTTCATATGCCACAAAACTAG
back to top
Add to Basket