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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s109 | supercontig | LSalAtl2s109:777711..783130 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000630 >EMLSAP00000000630 ID=EMLSAP00000000630|Name=EMLSAP00000000630|organism=Lepeophtheirus salmonis|type=polypeptide|length=645bp
YGEKSLGLSRYDQEYSSPYGSKRDFDEGHKEDIEQESIKYHSLVNKALNT
AKDADRFVGDSIKEQEKSQKDHIRYKRSVVPLGSTAKRTFKPFPPQAVVP
AAAAVESAPVVAAPVVGLPQTEPVAVAEPALIAPQPIQRQQAPVAAPVAE
MQVENTLPQXAATKEKTPEYEDEEGEEPVPTEPKGEMAPGGQGEIDPGKI
DEMIDLMNSLNQKFAKMIANWDEYAANHETGGGEAGASMDADSGAGEGMG
ETKRKPAKPKKKAPKQPEEETEYEAPEEEGEEXAAGXGAAALSCKTMNYK
VIGLICTSILATGLSFVIQSPKYDALSHNMEKHDVESGGNMQRLAINVAN
NDEEFDLWDLTNALIKGGIEETVIGALRKDGGEDNESDLKAIGTAIKQGF
LKLQEKALIDKNAMAKGKAEESLERRKRSGIVDKDVDISMSDIDKAIEKM
NGLNKQFAGMVDLWDNYHLLKADAVKPESPKDRNNDDEDYESREEEKEDY
ESEEEDKDLREERESDEEVDPDEYANISQPSEDSIESDGENENIKDGDSK
EEGDEIPKMDDKDSTKKENELDLQKNKSSTDDSNEKSNKMDDTPVDKEGD
SIESGENEDLSDEAESEEESEEDEDYDGGSEEDESQDENDEDIDV back to topmRNA from alignment at LSalAtl2s109:777711..783130- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000630-696477 ID=EMLSAT00000000630-696477|Name=EMLSAT00000000630|organism=Lepeophtheirus salmonis|type=mRNA|length=5420bp|location=Sequence derived from alignment at LSalAtl2s109:777711..783130- (Lepeophtheirus salmonis)
TATGGCGAGAAATCCTTGGGTTTATCAAGATGTAAGTCTTTTATTTACTC
TTAGGTTTTATCATAATATAACTCAAACTTAATACTTCTTAAAGACGACC
AAGAGTATTCAAGTCCCTATGGTTCTAAACGAGATTTTGATGAGGGTCAT
AAGGAGGATATTGAACAAGAAAGCATCAAGTATCACTCCCTAGTTAACAA
AGCACTCAATACTGCAAAGGACGCGGATCGTTTTGTGGGAGACTCAATTA
AGGAACAGGAAAAGTCTCAAAAAGACCATATAAGATATAAACGCTCCGTT
GTTCCTTTAGGATCAACAGCCAAGAGAACATTTAAACCTTTTCCACCTCA
AGCAGTGGTTCCAGCAGCAGCAGCAGTAGAATCCGCCCCTGTTGTAGCGG
CGCCCGTTGTCGGATTACCCCAAACAGAGCCCGTAGCAGTAGCAGAGCCT
GCATTAATAGCTCCTCAACCAATACAAAGACAACAGGCTCCTGTAGCAGC
CCCTGTTGCAGAAATGCAGGTTGAGAATACTCTTCCACAGGMAGCTGCAA
CCAAGGAAAAGACTCCGGAATATGAGGATGAAGAGGGAGAAGAACCTGTT
CCAACAGAGCCAAAAGGTGAAATGGCCCCAGGGGGACAAGGGGAGATTGA
TCCCGGGAAAATAGATGAGATGATTGATCTCATGAATAGTCTAAATCAAA
AGTTTGGTAATTTTTTAAATTTCAATCAAAAATGAATGGTAAATGATTTG
TTTTTCCTTTATTTACTTTGAATAGCAAAAATGATTGCAAATTGGGATGA
ATATGCTGCAAATCATGAAACAGGAGGAGGAGAGGCCGGAGCAAGTATGG
ATGCGGATAGTGGAGCAGGAGAAGGGATGGGAGAAACAAAAAGAAAACCA
GCAAAACCCAAGAAAAAGGCTCCAAAACAACCAGAAGAGGAAACGGAATA
TGAAGCTCCCGAAGAGGAAGGAGAAGAGCSGGCGGCYGGGYGMGGAGCCG
CAGCACTTTCAGTAGGCGCTACCAAGATGAAAAGAGCCAAAAAGTTTCCA
CAGTTATTATAAACCTTGTTGTTAATATTCTATGATAGTCGCGTTTTAAT
AATATTATTCCTTCATTTCTTATAAAATAATAAGAGAATCATGAAATACA
TTTTTCCTAGCTATTGATAATTATGATCCATTATTTAATTAATTAATTAG
AAGGTCATAAATTGTGTGAAATTTGAGAACTAAAAAAAATAAATATACTT
ATATACATACAAAAATTTTAAATTATCCGATTTATCGGAAGTTAAAGTAC
TAAAGGCCTATCTTGAGAGTGCAAGACAATGAATTATAAAGTGATTGGAT
TGATTTGTACTTCCATCCTGGCTACGGGTCTCTCATTTGTGATACAAAGT
CCTAAATATGATGCACTATCCCATAACATGGAAAAACATGACGTTGAGAG
TGGAGGCAATATGCAAAGATTAGTAAGAGATGATTTCTTCATTCATTTTG
CGTTGTCTTGAAATGACTATCTATGTATGTACATATGTACTTATTCAAGC
TTCCTTATCACTTTAATGGAACACACTTTGCAATCATTCAGTAGAAACAA
AGTGAATATTAATTAGTTTGCTCAATCTGTCAATCCATTATGTGCTACCC
ACTATATTTGATTCTTTTACATATACCTAAAGGCAATAAATGTGGCAAAC
AACGATGAGGAATTTGACTTGTGGGACTTGACAAATGCTTTAATCAAAGG
AGGGATTGAAGAAACCGTGATTGGAGCACTACGAAAGGACGGAGGAGAAG
ACAATGAGAGTGATTTAAAAGCAATAGGTACTGCAATCAAACAAGGATTC
CTAAAACTACAAGAAAAGGCGCTTATAGATAAAAATGCAATGGCTAAAGG
GAAAGCAGAAGAGAGTCTGGTTCATGTTGGGATTCAAGGGCCACCAAATC
ATGGTAGACAGATTGGGCAAAACAAATTCAAAAATATTTAAAAAAATTAA
TACAGCTCACTTTTTCAAAAATAAAAATCTAATCTCTTTTCCCTGCTTTT
TGTACATAACCATATTAAATCAATAAAATCATCCATTTGACAATCCATAT
TTGTAATCTATTTGTAAATTCCATTATCCACTTTTGTCATCACAAATAAA
AATTATTCAAATAAAAAATATACATCTTCGTTTACAGGAACGAAGGAAAA
GATCAGGGATTGTTGACAAAGATGTAGACATCAGTATGTCGGATATAGAT
AAGGCAATAGAGAAAATGAATGGCTTAAATAAACAATTTGGTAATTAATT
AAGAGTTTATCAATCATAGCCTATGATGGCGTCTGTATTTACTGCAATAA
TTATTTTCAAATACAGTCAAGTGTTTGAAAGTAATGCTAATGGCCGGATC
ATTCCACACCAAATGACCACGGAAGTTAAACGCATATCTCAGAATTTGCT
GATTATTTTATAGGACGACGTAGATACGACCATAGTGTGGCGGAGMATGT
GTGGAGTTTACAGAACTGTAACTTTTATTTTACGTCAAATTCTGCCACAA
GCTTAAAATACGTCGTAAAAATTTGTGTTACAAATTACTGAAAAATATTT
TTGAGGGATTGTATATATCAAACATGCATTAAATTTACATTTGTGGAGTT
AATATGCTTTAATTAATCTACACACGAATTTTGAACTAAATTGAAGGATG
TATCCGGGGCGTACGCAGAATTATATTTGGGAGGGAGACTCTAGGCTTTC
GGATTTTTATTTTTATTGAAAAATTTAAGTTTTCAATTAAAATAAATTTT
AAAATCCATAACAATTCACATATAATTAATTTTTTTGAAAAAAAAACTTG
AAAAATTAAATTTTTTGGAAAAAAAAATCATAAGCTCCATGCTATTCACA
AAAAAATTAAATTTTTGAAAAGAAAAATACAAAAAACTTGATGTCAAATA
TTTAATTTTTTGGAAAAAGAATTCAAATATTACAATTTTTAGAAAAAAGT
TCAAAAATCCAAAGCTATTCACAGAAAACTAAGTTTTCTGGGGAAAAAAC
TTGAAAAATTGAACTTTTTGGAAAAAACTTCAAAAATTTCACTTCAAATA
TTTAATTTTGGATTAAAAATTTCAAACATCCATAGATATTTGGAAGAAAA
ATCTAATATCCGGAACCATTCACAATAACTTAAAATTTTAAATTTTTCGG
GGAAAAAATTGCTAATATTAAATTTTTCGGGAAAAAATTCTAATAAAAAG
CAAAAATGCCTCAATTTGAGGAGGGGGCTGCAACTCCTTCAGCCCATCCC
TTGCGGACGCGCCTGGGCATTAATGTTTAAATAAGAAATTTGGGAGCCTT
TTATGGAGGAAAATATAATTAATTTTGCTCATTTTAAACGCCATATCTCT
GGAACTAATGAACAAATTGATCTCAATTTTTCATTTTTTTTTCACATCCT
ATTAAAAAATTGTTAAATTCTGATATAAATAACTATGTTTTGTTAGAATT
TTTGTGCGATTTGTCGTGGAATCATCCTAATCCATTTGTATTATTCGAGG
TTTGATCTACATGTTATTTTCCCATTACAAATTCAATTCCCATTTTTTTA
AATTATGTTATAATACATTTCCACAACATTTAGATTGTTGTTTTGTTTTG
TTTTTATGATAAAGAGATTAACCATCTTTTGTTTTGCTCTACGATTTTCT
TTGATCGAAAAAAATGAGGTAAAAGTCAACTTATGATAACTTTTAAAAGA
TTGTTTATCTTTTCAAAATTTAACATTTAGTAAAAAATAAGCAATCTTTC
GAAAGTCATTTTAAAGAATTTTCCCCCAATTTGATTTTTTCAATAGCAGA
AAATTGCGGTGACCATAAAAAATGATGTTTAACCGTTTTATCTGTCAAAA
ACAAACTAAAAATACAAAATGTCTGATATTCTCAACATATGTTGGGGACA
TGTAGACCAACATAAAAAAATTAATTTGGTTAATCCAATAAAAATTGAGT
TATGAATGAGAAAATAAGTGATTATTTCTTATTGGGGGAGTATATTTTGT
ATTTATAAAACTCAAGCTTATGATCTAAACAAGAATGTTCAAACGAAATA
TATATATTTATATTTTTTTTCAAATATAATTCATAAATCCTATTAACAAA
AAATTTCAAAAATCCCAGCCCTCCCCCTGCAGACGCCCCTGATTATTAAT
AGTTTATTTGTATTCTCTGAATGGTGACGGATGAATATAATCATTGATTA
ATAAAAATATACTTTATAATATTGAAATTCTAGATCAGAAAATACTTTTA
GATCCAAGTATCGGATACCAAAAACTACAGCCATTCAAGTTTAAAGACAT
AAACTCAAGCCAGTCATTATATTAATAGATTTTTTTAAATCAAACTACTA
GTAATTATTATCAAATGATTAATTTTTAATTGATAACTTTTTTATCTGAC
TCTCTTGGCTTAGGTTTAAGCCATAGGTGTATTAAAATACTTACAGAAAC
GAAATTTAGTCAAATCTTCTCAATTGTTTTCATTATTATTTAACAATATT
TTTGAAATCCATCTTCTCATGGAAACAGATAAATATGAAATGAAATGAAA
TTGAAGTCATTTATATATTTTGAATCGATATTATCGATTACTAAGCTCCA
TAATATTATTATATTTATCCTTTTCAAATTATTATTATAATTATCGAATA
TCAATATTTGATAATGATGTAACAATGTAAATGACACTTTCAAGGTCCCA
GAAATAAGTTCAAAAATGAGGAATAACCTAATTGATGACTCTTCTCTCCC
TACCCCAAAAAACACATTCAAAAGAAATGCCTATAATTACATTTGATATT
ACAGCAGGTATGGTTGACCTCTGGGACAACTATCACCTTCTAAAAGCCGA
TGCTGTAAAACCAGAGTCTCCCAAGGATCGTAACAACGATGATGAAGACT
ATGAAAGTAGGGAAGAAGAAAAAGAAGACTACGAAAGCGAAGAAGAGGAC
AAGGATCTGAGAGAAGAGAGGGAGAGTGATGAAGAAGTAGATCCAGATGA
ATATGCAAACATCTCCCAACCAAGTGAGGACTCTATTGAGTCAGACGGCG
AAAACGAGAATATTAAAGATGGGGATTCAAAAGAGGAAGGAGATGAGATC
CCTAAGATGGATGACAAGGATTCAACGAAAAAAGAAAATGAATTGGATCT
GCAAAAGAATAAAAGCAGTACGGATGACTCAAATGAGAAGTCCAACAAAA
TGGATGATACGCCCGTTGATAAAGAAGGAGACTCAATAGAGAGTGGAGAA
AATGAGGATCTATCCGACGAGGCCGAAAGTGAAGAAGAGTCGGAAGAAGA
TGAAGACTATGATGGTGGATCAGAAGAAGATGAATCTCAAGATGAAAATG
ATGAGGATATAGATGTATAA back to top
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