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Associated RNAi Experiments
Homology
BLAST of EMLSAG00000000630 vs. L. salmonis peptides
Match: EMLSAP00000000630 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:777711:783130:-1 gene:EMLSAG00000000630 transcript:EMLSAT00000000630 description:"maker-LSalAtl2s109-augustus-gene-8.28") HSP 1 Score: 1286.17 bits (3327), Expect = 0.000e+0 Identity = 645/645 (100.00%), Postives = 645/645 (100.00%), Query Frame = 0
Query: 1 YGEKSLGLSRYDQEYSSPYGSKRDFDEGHKEDIEQESIKYHSLVNKALNTAKDADRFVGDSIKEQEKSQKDHIRYKRSVVPLGSTAKRTFKPFPPQAVVPAAAAVESAPVVAAPVVGLPQTEPVAVAEPALIAPQPIQRQQAPVAAPVAEMQVENTLPQXAATKEKTPEYEDEEGEEPVPTEPKGEMAPGGQGEIDPGKIDEMIDLMNSLNQKFAKMIANWDEYAANHETGGGEAGASMDADSGAGEGMGETKRKPAKPKKKAPKQPEEETEYEAPEEEGEEXAAGXGAAALSCKTMNYKVIGLICTSILATGLSFVIQSPKYDALSHNMEKHDVESGGNMQRLAINVANNDEEFDLWDLTNALIKGGIEETVIGALRKDGGEDNESDLKAIGTAIKQGFLKLQEKALIDKNAMAKGKAEESLERRKRSGIVDKDVDISMSDIDKAIEKMNGLNKQFAGMVDLWDNYHLLKADAVKPESPKDRNNDDEDYESREEEKEDYESEEEDKDLREERESDEEVDPDEYANISQPSEDSIESDGENENIKDGDSKEEGDEIPKMDDKDSTKKENELDLQKNKSSTDDSNEKSNKMDDTPVDKEGDSIESGENEDLSDEAESEEESEEDEDYDGGSEEDESQDENDEDIDV 645
YGEKSLGLSRYDQEYSSPYGSKRDFDEGHKEDIEQESIKYHSLVNKALNTAKDADRFVGDSIKEQEKSQKDHIRYKRSVVPLGSTAKRTFKPFPPQAVVPAAAAVESAPVVAAPVVGLPQTEPVAVAEPALIAPQPIQRQQAPVAAPVAEMQVENTLPQXAATKEKTPEYEDEEGEEPVPTEPKGEMAPGGQGEIDPGKIDEMIDLMNSLNQKFAKMIANWDEYAANHETGGGEAGASMDADSGAGEGMGETKRKPAKPKKKAPKQPEEETEYEAPEEEGEEXAAGXGAAALSCKTMNYKVIGLICTSILATGLSFVIQSPKYDALSHNMEKHDVESGGNMQRLAINVANNDEEFDLWDLTNALIKGGIEETVIGALRKDGGEDNESDLKAIGTAIKQGFLKLQEKALIDKNAMAKGKAEESLERRKRSGIVDKDVDISMSDIDKAIEKMNGLNKQFAGMVDLWDNYHLLKADAVKPESPKDRNNDDEDYESREEEKEDYESEEEDKDLREERESDEEVDPDEYANISQPSEDSIESDGENENIKDGDSKEEGDEIPKMDDKDSTKKENELDLQKNKSSTDDSNEKSNKMDDTPVDKEGDSIESGENEDLSDEAESEEESEEDEDYDGGSEEDESQDENDEDIDV
Sbjct: 1 YGEKSLGLSRYDQEYSSPYGSKRDFDEGHKEDIEQESIKYHSLVNKALNTAKDADRFVGDSIKEQEKSQKDHIRYKRSVVPLGSTAKRTFKPFPPQAVVPAAAAVESAPVVAAPVVGLPQTEPVAVAEPALIAPQPIQRQQAPVAAPVAEMQVENTLPQXAATKEKTPEYEDEEGEEPVPTEPKGEMAPGGQGEIDPGKIDEMIDLMNSLNQKFAKMIANWDEYAANHETGGGEAGASMDADSGAGEGMGETKRKPAKPKKKAPKQPEEETEYEAPEEEGEEXAAGXGAAALSCKTMNYKVIGLICTSILATGLSFVIQSPKYDALSHNMEKHDVESGGNMQRLAINVANNDEEFDLWDLTNALIKGGIEETVIGALRKDGGEDNESDLKAIGTAIKQGFLKLQEKALIDKNAMAKGKAEESLERRKRSGIVDKDVDISMSDIDKAIEKMNGLNKQFAGMVDLWDNYHLLKADAVKPESPKDRNNDDEDYESREEEKEDYESEEEDKDLREERESDEEVDPDEYANISQPSEDSIESDGENENIKDGDSKEEGDEIPKMDDKDSTKKENELDLQKNKSSTDDSNEKSNKMDDTPVDKEGDSIESGENEDLSDEAESEEESEEDEDYDGGSEEDESQDENDEDIDV 645
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000630 vs. GO
Analysis Date: 2014-04-02 ( Blast vs. GO)
Total hits: 0
| Match Name | E-value | Identity | Description | |
|---|
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BLAST of EMLSAG00000000630 vs. L. salmonis peptides
Analysis Date: 2014-05-10 ( Blastp vs. self)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| EMLSAP00000000630 | 0.000e+0 | 100.00 | pep:novel supercontig:LSalAtl2s:LSalAtl2s109:77771... | [more] |
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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s109 | supercontig | LSalAtl2s109:777711..783130 - |
Analyses
This gene is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Description | maker-LSalAtl2s109-augustus-gene-8.28 |
| Biotype | protein_coding |
| Evidence | IEA |
| Note | Hypothetical protein |
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:777711..783130- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAG00000000630-683396 ID=EMLSAG00000000630-683396|Name=EMLSAG00000000630|organism=Lepeophtheirus salmonis|type=gene|length=5420bp|location=Sequence derived from alignment at LSalAtl2s109:777711..783130- (Lepeophtheirus salmonis)
TATGGCGAGAAATCCTTGGGTTTATCAAGATGTAAGTCTTTTATTTACTC
TTAGGTTTTATCATAATATAACTCAAACTTAATACTTCTTAAAGACGACC
AAGAGTATTCAAGTCCCTATGGTTCTAAACGAGATTTTGATGAGGGTCAT
AAGGAGGATATTGAACAAGAAAGCATCAAGTATCACTCCCTAGTTAACAA
AGCACTCAATACTGCAAAGGACGCGGATCGTTTTGTGGGAGACTCAATTA
AGGAACAGGAAAAGTCTCAAAAAGACCATATAAGATATAAACGCTCCGTT
GTTCCTTTAGGATCAACAGCCAAGAGAACATTTAAACCTTTTCCACCTCA
AGCAGTGGTTCCAGCAGCAGCAGCAGTAGAATCCGCCCCTGTTGTAGCGG
CGCCCGTTGTCGGATTACCCCAAACAGAGCCCGTAGCAGTAGCAGAGCCT
GCATTAATAGCTCCTCAACCAATACAAAGACAACAGGCTCCTGTAGCAGC
CCCTGTTGCAGAAATGCAGGTTGAGAATACTCTTCCACAGGMAGCTGCAA
CCAAGGAAAAGACTCCGGAATATGAGGATGAAGAGGGAGAAGAACCTGTT
CCAACAGAGCCAAAAGGTGAAATGGCCCCAGGGGGACAAGGGGAGATTGA
TCCCGGGAAAATAGATGAGATGATTGATCTCATGAATAGTCTAAATCAAA
AGTTTGGTAATTTTTTAAATTTCAATCAAAAATGAATGGTAAATGATTTG
TTTTTCCTTTATTTACTTTGAATAGCAAAAATGATTGCAAATTGGGATGA
ATATGCTGCAAATCATGAAACAGGAGGAGGAGAGGCCGGAGCAAGTATGG
ATGCGGATAGTGGAGCAGGAGAAGGGATGGGAGAAACAAAAAGAAAACCA
GCAAAACCCAAGAAAAAGGCTCCAAAACAACCAGAAGAGGAAACGGAATA
TGAAGCTCCCGAAGAGGAAGGAGAAGAGCSGGCGGCYGGGYGMGGAGCCG
CAGCACTTTCAGTAGGCGCTACCAAGATGAAAAGAGCCAAAAAGTTTCCA
CAGTTATTATAAACCTTGTTGTTAATATTCTATGATAGTCGCGTTTTAAT
AATATTATTCCTTCATTTCTTATAAAATAATAAGAGAATCATGAAATACA
TTTTTCCTAGCTATTGATAATTATGATCCATTATTTAATTAATTAATTAG
AAGGTCATAAATTGTGTGAAATTTGAGAACTAAAAAAAATAAATATACTT
ATATACATACAAAAATTTTAAATTATCCGATTTATCGGAAGTTAAAGTAC
TAAAGGCCTATCTTGAGAGTGCAAGACAATGAATTATAAAGTGATTGGAT
TGATTTGTACTTCCATCCTGGCTACGGGTCTCTCATTTGTGATACAAAGT
CCTAAATATGATGCACTATCCCATAACATGGAAAAACATGACGTTGAGAG
TGGAGGCAATATGCAAAGATTAGTAAGAGATGATTTCTTCATTCATTTTG
CGTTGTCTTGAAATGACTATCTATGTATGTACATATGTACTTATTCAAGC
TTCCTTATCACTTTAATGGAACACACTTTGCAATCATTCAGTAGAAACAA
AGTGAATATTAATTAGTTTGCTCAATCTGTCAATCCATTATGTGCTACCC
ACTATATTTGATTCTTTTACATATACCTAAAGGCAATAAATGTGGCAAAC
AACGATGAGGAATTTGACTTGTGGGACTTGACAAATGCTTTAATCAAAGG
AGGGATTGAAGAAACCGTGATTGGAGCACTACGAAAGGACGGAGGAGAAG
ACAATGAGAGTGATTTAAAAGCAATAGGTACTGCAATCAAACAAGGATTC
CTAAAACTACAAGAAAAGGCGCTTATAGATAAAAATGCAATGGCTAAAGG
GAAAGCAGAAGAGAGTCTGGTTCATGTTGGGATTCAAGGGCCACCAAATC
ATGGTAGACAGATTGGGCAAAACAAATTCAAAAATATTTAAAAAAATTAA
TACAGCTCACTTTTTCAAAAATAAAAATCTAATCTCTTTTCCCTGCTTTT
TGTACATAACCATATTAAATCAATAAAATCATCCATTTGACAATCCATAT
TTGTAATCTATTTGTAAATTCCATTATCCACTTTTGTCATCACAAATAAA
AATTATTCAAATAAAAAATATACATCTTCGTTTACAGGAACGAAGGAAAA
GATCAGGGATTGTTGACAAAGATGTAGACATCAGTATGTCGGATATAGAT
AAGGCAATAGAGAAAATGAATGGCTTAAATAAACAATTTGGTAATTAATT
AAGAGTTTATCAATCATAGCCTATGATGGCGTCTGTATTTACTGCAATAA
TTATTTTCAAATACAGTCAAGTGTTTGAAAGTAATGCTAATGGCCGGATC
ATTCCACACCAAATGACCACGGAAGTTAAACGCATATCTCAGAATTTGCT
GATTATTTTATAGGACGACGTAGATACGACCATAGTGTGGCGGAGMATGT
GTGGAGTTTACAGAACTGTAACTTTTATTTTACGTCAAATTCTGCCACAA
GCTTAAAATACGTCGTAAAAATTTGTGTTACAAATTACTGAAAAATATTT
TTGAGGGATTGTATATATCAAACATGCATTAAATTTACATTTGTGGAGTT
AATATGCTTTAATTAATCTACACACGAATTTTGAACTAAATTGAAGGATG
TATCCGGGGCGTACGCAGAATTATATTTGGGAGGGAGACTCTAGGCTTTC
GGATTTTTATTTTTATTGAAAAATTTAAGTTTTCAATTAAAATAAATTTT
AAAATCCATAACAATTCACATATAATTAATTTTTTTGAAAAAAAAACTTG
AAAAATTAAATTTTTTGGAAAAAAAAATCATAAGCTCCATGCTATTCACA
AAAAAATTAAATTTTTGAAAAGAAAAATACAAAAAACTTGATGTCAAATA
TTTAATTTTTTGGAAAAAGAATTCAAATATTACAATTTTTAGAAAAAAGT
TCAAAAATCCAAAGCTATTCACAGAAAACTAAGTTTTCTGGGGAAAAAAC
TTGAAAAATTGAACTTTTTGGAAAAAACTTCAAAAATTTCACTTCAAATA
TTTAATTTTGGATTAAAAATTTCAAACATCCATAGATATTTGGAAGAAAA
ATCTAATATCCGGAACCATTCACAATAACTTAAAATTTTAAATTTTTCGG
GGAAAAAATTGCTAATATTAAATTTTTCGGGAAAAAATTCTAATAAAAAG
CAAAAATGCCTCAATTTGAGGAGGGGGCTGCAACTCCTTCAGCCCATCCC
TTGCGGACGCGCCTGGGCATTAATGTTTAAATAAGAAATTTGGGAGCCTT
TTATGGAGGAAAATATAATTAATTTTGCTCATTTTAAACGCCATATCTCT
GGAACTAATGAACAAATTGATCTCAATTTTTCATTTTTTTTTCACATCCT
ATTAAAAAATTGTTAAATTCTGATATAAATAACTATGTTTTGTTAGAATT
TTTGTGCGATTTGTCGTGGAATCATCCTAATCCATTTGTATTATTCGAGG
TTTGATCTACATGTTATTTTCCCATTACAAATTCAATTCCCATTTTTTTA
AATTATGTTATAATACATTTCCACAACATTTAGATTGTTGTTTTGTTTTG
TTTTTATGATAAAGAGATTAACCATCTTTTGTTTTGCTCTACGATTTTCT
TTGATCGAAAAAAATGAGGTAAAAGTCAACTTATGATAACTTTTAAAAGA
TTGTTTATCTTTTCAAAATTTAACATTTAGTAAAAAATAAGCAATCTTTC
GAAAGTCATTTTAAAGAATTTTCCCCCAATTTGATTTTTTCAATAGCAGA
AAATTGCGGTGACCATAAAAAATGATGTTTAACCGTTTTATCTGTCAAAA
ACAAACTAAAAATACAAAATGTCTGATATTCTCAACATATGTTGGGGACA
TGTAGACCAACATAAAAAAATTAATTTGGTTAATCCAATAAAAATTGAGT
TATGAATGAGAAAATAAGTGATTATTTCTTATTGGGGGAGTATATTTTGT
ATTTATAAAACTCAAGCTTATGATCTAAACAAGAATGTTCAAACGAAATA
TATATATTTATATTTTTTTTCAAATATAATTCATAAATCCTATTAACAAA
AAATTTCAAAAATCCCAGCCCTCCCCCTGCAGACGCCCCTGATTATTAAT
AGTTTATTTGTATTCTCTGAATGGTGACGGATGAATATAATCATTGATTA
ATAAAAATATACTTTATAATATTGAAATTCTAGATCAGAAAATACTTTTA
GATCCAAGTATCGGATACCAAAAACTACAGCCATTCAAGTTTAAAGACAT
AAACTCAAGCCAGTCATTATATTAATAGATTTTTTTAAATCAAACTACTA
GTAATTATTATCAAATGATTAATTTTTAATTGATAACTTTTTTATCTGAC
TCTCTTGGCTTAGGTTTAAGCCATAGGTGTATTAAAATACTTACAGAAAC
GAAATTTAGTCAAATCTTCTCAATTGTTTTCATTATTATTTAACAATATT
TTTGAAATCCATCTTCTCATGGAAACAGATAAATATGAAATGAAATGAAA
TTGAAGTCATTTATATATTTTGAATCGATATTATCGATTACTAAGCTCCA
TAATATTATTATATTTATCCTTTTCAAATTATTATTATAATTATCGAATA
TCAATATTTGATAATGATGTAACAATGTAAATGACACTTTCAAGGTCCCA
GAAATAAGTTCAAAAATGAGGAATAACCTAATTGATGACTCTTCTCTCCC
TACCCCAAAAAACACATTCAAAAGAAATGCCTATAATTACATTTGATATT
ACAGCAGGTATGGTTGACCTCTGGGACAACTATCACCTTCTAAAAGCCGA
TGCTGTAAAACCAGAGTCTCCCAAGGATCGTAACAACGATGATGAAGACT
ATGAAAGTAGGGAAGAAGAAAAAGAAGACTACGAAAGCGAAGAAGAGGAC
AAGGATCTGAGAGAAGAGAGGGAGAGTGATGAAGAAGTAGATCCAGATGA
ATATGCAAACATCTCCCAACCAAGTGAGGACTCTATTGAGTCAGACGGCG
AAAACGAGAATATTAAAGATGGGGATTCAAAAGAGGAAGGAGATGAGATC
CCTAAGATGGATGACAAGGATTCAACGAAAAAAGAAAATGAATTGGATCT
GCAAAAGAATAAAAGCAGTACGGATGACTCAAATGAGAAGTCCAACAAAA
TGGATGATACGCCCGTTGATAAAGAAGGAGACTCAATAGAGAGTGGAGAA
AATGAGGATCTATCCGACGAGGCCGAAAGTGAAGAAGAGTCGGAAGAAGA
TGAAGACTATGATGGTGGATCAGAAGAAGATGAATCTCAAGATGAAAATG
ATGAGGATATAGATGTATAA back to top
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