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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s109 | supercontig | LSalAtl2s109:798559..802919 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000631 >EMLSAP00000000631 ID=EMLSAP00000000631|Name=EMLSAP00000000631|organism=Lepeophtheirus salmonis|type=polypeptide|length=1113bp
MSDESGDTQCDPVKGTETEPKTEDCYRYEGDVCIYTDPWTKKEYVLNSSK
TDWVPREETDYEFDGKTYIHRDKKTGRKRRWNLDSKEWETSESELDSDSE
NEKPIVKKAMPGWNPDKNILKDNDTGVQTYKDPVDGTTYEWDSDKNAWFP
KIDSEFMAXYQLNXGFXSDGQAKPTIPDAPTPEAPKPTPETKQKQTKKAE
WFQVEKNKNAKVYVSGLPESITEEKFISMMSRFGVIENLKPKKLRKKELE
NLKKQKDKKLAWDLDVARGMECRPKYHKVIVLFNLFSPSDFVEKPEKIID
LKVKIRNSCEKFGRVKRLEVYDQHADLAIQMLNGRLFNGRXLKVIVWDGK
TKYQNSETDDEQQKRYEAWKKFLDDGDEEEEEDKDNHPEKQNHDSYKSDN
HITRHIFKKVDLKTLEKYRNWIASNKAADPDESTISNWIMSSFADLDYSY
TSKYNALLSFEDPLNPSKIDGMDGAGNIIFSSNRLSSNPHYSVESNSLVY
ANYAQEKDFAYLRSIGVGISDKILIARFGKISIGRKISNSQKFEAKGLIL
IDDPPAYTNDHRVEMSSKFGSGLLIDDYGRGDPLTPGWSSLDGSVKLKLL
NLYSLPHIPVHYINSEIARNIMSKLGGRDTPKDWIGSMTGLRYKVGGEFL
LSEELERVKLQVHSINEIRSIKNIVGMIKGSVEPDRYIIFGSNRAASNDS
PNESLSGISAIVKLARSFSETMKRYNWRPRRSILFVSWGAKEFGLLGSTE
WIEENLPLLKNRLVAYINLDECYSGSLMSIKASPGMSKILLKSSKKLKDP
FDSTKSYYDSKLKDLNVRQNQGNTVTNFMELDSFFIDDSNEKSPRDFLRK
ETEDDGFFEDYDDEDDLLKSAQRPLSLLGSEGDYYPFSFLSNTPSVDIRF
ITHQETGNNNFNTNTKKSPSSNDLKNLQLCIRYASDVMRNFADSVILPFE
PNDYSLILMEGINYIKSNLTYSRLFSSKDISLKYLEQSISEFTTVSANWT
NYVASLAPEQNPMMARMINDQIVQLPRLFSLHDDHRNITTNILFGPDIDP
SISVPFPRLRLLIRKLFIYSEENIGEANTETNPRIDEHIFNLKKHITELF
IAIKNGIKQLKPF back to topmRNA from alignment at LSalAtl2s109:798559..802919- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000631-696478 ID=EMLSAT00000000631-696478|Name=EMLSAT00000000631|organism=Lepeophtheirus salmonis|type=mRNA|length=4361bp|location=Sequence derived from alignment at LSalAtl2s109:798559..802919- (Lepeophtheirus salmonis)
ATGTCGGATGAATCCGGTGATACTCAATGCGACCCTGTAAAAGGAACTGA
GACGGAGCCAAAGACAGAAGACTGTTACCGCTACGAGGGCGACGTTTGTA
TCTACACTGATCCATGGACCAAAAAGGAGTATGTTTTGAATTCATCCAAG
ACGGATTGGGTTCCGAGAGAGGAAACAGACTATGAATTTGATGGAAAAAC
ATATATTCATCGCGATAAAAAGACTGGGCGAAAGAGGCGATGGAATTTAG
ATTCTAAAGAATGGGAAACCTCGGAGTCGGAATTAGACTCTGATTCCGAA
AATGAAAAACCCATAGTTAAAAAAGGTTCATTCATTAATTAATCATACTA
AGCTTAATAATATTCATACTTTATAAACTTAAATAAAAACCATGACTCAT
TTGATTATTCTATTTCTAGCAATGCCTGGCTGGAATCCAGATAAAAATAT
ATTAAAAGATAATGACACTGGTGTTCAAACATATAAGGATCCAGTTGATG
GTACAACCTATGAATGGGATTCCGACAAGAATGCTTGGTTTCCAAAAATA
GATTCGGAATTTATGGCTGKTTACCAACTGAATTANGGCTTTWCATCTGA
TGGACAAGCCAAACCAACCATYCCAGATGCTCCGACTCCAGAAGCCCCCA
AACCTACACCTGAAACAAAACAAAAACAGACTAAAAAAGCAGAATGGTTT
CAAGTCGAAAAAAACAAAAACGCCAAAGTCTACGTTTCAGGACTTCCAGA
ATCAATAACAGAAGAAAAGTTCATCAGTATGATGTCCAGATTTGGAGTCA
TAGAAAGTGATGTAAGGAATGACAACAAACCAAGGATTAAAATTTATCGA
GATTTGAACGGTGTACCGAAAGGAGATGCTCTATGTTCATATGTGATGGT
CGAGTCTGTAGATTTATCCATACAGATTTTAGATGATTCTCTTTATGAGG
ACGGAAAATCCAAAATACGAGTGGAAAGAGCCACGTTTGAAATGAAAGGG
GAGGCTTATAATCCAGATCTAAAACCAAAAAAACTACGCAAAAAAGAGTT
GGAAAATCTCAAAAAACAAAAAGATAAGAAACTTGCGTGGGATCTTGATG
TTGCACGTGGAATGGAGTGCCGTCCCAAGTATCATAAAGTCATTGTACTA
TTCAATCTATTTTCCCCATCTGATTTCGTCGAGAAACCAGAGAAAATAAT
TGATCTAAAGGTGAAAATTAGAAATTCATGTGAAAAGTTTGGTAGAGTTA
AAAGATTGGAGGTCTACGATCAACATGTTNNNNNNATGGCATTGGCATGA
TATCCTTCAATGATCCAATAGAGGCAGATCTTGCAATACAAATGCTCAAT
GGTCGACTCTTTAATGGAAGGGKATTAAAAGTTATAGTTTGGGATGGAAA
AACCAAATATCAAAATTCAGAAACAGATGATGAACAACAAAAGCGTTATG
AGGCATGGAAAAAGTTCTTGGACGATGGTGATGAAGAGGAGGAGGAAGAC
AAAGACAATCATCCAGAGTCCTTGCCGAAAAAAAACGAAAAATAAACAAA
GTGGATATTGCCTACTTGAGATGTTACGAAATTATTTTGGCGATATCAAT
TTACTTCCTTGTAACCTAAGCCCAGCATCGTGATTATGAATAATGTATTG
ATTAGAACAACATAATCCTGTGTTATTGTTTTTTTCGAAAAAATATATTA
TTTTTTTTAAAACTTAAATAAGTAATATTTCATTTATTTTACTCAAGAAC
ATGGGGGCAGAAGGTTCTTCACCTCCGATTACTGTCCCTAAGAAAAGGGT
AAATCCTTTTTATGAAATATTCAAGAAATATTTCCCATTTCTGGTTTGGT
GTATTCTTGGAGTTGGACTCGGTGTTGGTCTTCATTTTATTATATACGGA
AATCAGATACACTTGATTTCGTAAGGGATTAAGTTTAGTTATATGATTTC
GGTAATTTATTCGTTCTGAATTTTCAGGAAGCAGAACCATGATTCCTACA
AGAGTGACAATCACATAACCAGGCATATTTTCAAAAAAGTTGATCTTAAA
ACCTTAGAAAAGTACAGGAATTGGATAGCATCAAACAAGGCTGCAGATCC
TGATGAATCCACCATCTCAAACTGGATAATGTCCTCCTTTGCTGATCTGG
ATTATTCTTATACATCCAAATATAATGCGCTTCTATCATTCGAAGATCCT
TTGAATCCCTCAAAGATTGATGGTATGGATGGTGCAGGCAATATTATATT
TAGCTCAAATAGATTATCGAGTAATCCGCATTATGTGTAAGTATATTGTG
TAGCTTATCAAATTAWTTTWCATATATTTATCAAAGGGACGAAAACNNNN
NNNAAGTAAACTTAATATATTATATTCGGCAAAAAAGTCAGTAGAGTCCA
ACAGTTTGGTCTATGCTAACTATGCTCAAGAAAAGGACTTTGCATATTTG
AGAAGTATTGGAGTTGGCATATCCGATAAAATATTAATTGCTCGTTTTGG
AAAAATATCGATTGGAAGAAAAATATCAAACTCTCAAAAATTTGAGGCTA
AAGGTCTTATTTTGATAGACGATCCTCCTGCCTATACAAATGACCATAGA
GTGGAAATGAGTTCAAAGTTTGGTTCTGGTCTTTTAATTGATGATTATGG
TCGAGGTGATCCACTTACACCAGGGTGGTCATCTTTAGATGGTTCAGTAA
AATTAAAGTTACTGAATCTATATTCCTTGCCTCACATCCCTGTTCATTAT
ATCAATTCTGAAATTGCTCGGAATATTATGTCTAAGCTTGGTGGGAGAGA
CACTCCTAAGGACTGGATTGGTAGTATGACCGGGCTGAGATACAAAGTTG
GTGGTGAATTTCTGCTCTCTGAAGAACTTGAGAGAGTTAAGCTTCAGGTT
CATAGCATCAATGAAATACGTAGTATCAAAAATATAGTTGGAATGATTAA
AGGATCCGTAGAGCCAGATAGGTATATCATATTCGGAAGCAACCGAGCTG
CCTCGAATGATTCTCCGAATGAATCCTTATCAGGTTAACTTTAATATTAA
GTGTATTTAAATATCTAATCCATATAATTTGTATAGGTATATCGGCAATA
GTAAAACTGGCAAGATCGTTCTCTGAGACAATGAAGAGGTACAATTGGAG
ACCGAGAAGAAGTATCCTATTTGTCTCTTGGGGAGCAAAAGAATTTGGAT
TACTTGGTTCAACAGAATGGATTGAAGAGAATTTACCATTATTGAAAAAT
CGCCTTGTGGCCTATATTAATTTAGATGAATGCTACTCTGGGTCTTTAAT
GTCAATCAAAGCTTCTCCAGGAATGTCCAAAATATTATTAAAATCATCTA
AAAAACTAAAGGACCCATTCGATTCAACAAAAAGTTACTACGATTCCAAA
CTCAAAGATCTCAATGTAAGACAAAATCAAGGGAATACCGTAACAAATTT
TATGGAACTGGATAGTTTCTTTATTGATGATTCTAACGAAAAAAGTCCAA
GAGACTTTTTAAGAAAAGAAACTGAAGATGATGGTTTTTTCGAGGTATTG
ACAAATTATGTTTAATTGCAATTTAAGAATAATTATATTATGATAGGATT
ATGATGATGAGGACGATTTATTGAAATCTGCGCAGAGACCTCTTAGTTTA
CTTGGCTCTGAAGGAGATTATTATCCTTTTTCCTTTTTGTCAAATACTCC
TTCAGTGGATATACGGTTTATAACTCATCAAGAAACTGGAAATAACAATT
TTAATACAAATACTAAAAAATCCCCCTCCTCAAATGATCTTAAGAACTTA
CAACTTTGTATACGCTATGCCTCAGATGTTATGAGGAACTTTGCTGATTC
AGTTATTTTACCATTTGAACCAAATGATTATTCATTGATTCTCATGGAAG
GAATCAATTATATCAAATCCAATCTCACTTACTCCAGACTTTTTTCATCC
AAGGATATTTCATTGAAATATCTAGAACAGAGTATTTCAGAATTTACAAC
CGTATCTGCTAATTGGACAAATTACGTTGCATCTTTAGCCCCCGAACAAA
ATCCCATGATGGCAAGAATGATAAATGACCAAATAGTTCAACTCCCAAGA
CTATTTTCTCTTCATGATGATCATCGAAATATAACGACCAACATCTTGTT
TGGTCCAGATATAGATCCATCAATATCTGTTCCTTTTCCTAGACTGAGAT
TACTCATTCGTAAATTATTTATATACTCGGAAGAAAACATTGGAGAGGCT
AATACGGAGACAAATCCCAGGATAGATGAACATATTTTTAATTTGAAGAA
ACACATAACAGAGCTATTTATTGCAATCAAAAATGGAATTAAGCAACTTA
AACCTTTTTAA back to top
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