EMLSAT00000000686, EMLSAT00000000686-696533 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000686
Unique NameEMLSAT00000000686-696533
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1109supercontigLSalAtl2s1109:114275..115336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000686 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000686EMLSAG00000000686-683452Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002972EMLSAE00000002972-711900Lepeophtheirus salmonisexon
EMLSAE00000002973EMLSAE00000002973-711901Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772511auto772511Lepeophtheirus salmonispolypeptide
EMLSAP00000000686EMLSAP00000000686Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000686

>EMLSAP00000000686 ID=EMLSAP00000000686|Name=EMLSAP00000000686|organism=Lepeophtheirus salmonis|type=polypeptide|length=153bp
MGETQSLGDLTSEAMIETYKVNCIAPTILARALLPLLKKVAKPDAGFGCD
NAAIIQMSASVAPIAENESGGWYPYRCSKTALNMAMKNVSLELKKDGILV
LSLRPGWVKTDMGGSNAQITVEECVSAMVRTLCQLSDKDHGAFIPYNNTP
GAW
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mRNA from alignment at LSalAtl2s1109:114275..115336+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000686-696533 ID=EMLSAT00000000686-696533|Name=EMLSAT00000000686|organism=Lepeophtheirus salmonis|type=mRNA|length=1062bp|location=Sequence derived from alignment at LSalAtl2s1109:114275..115336+ (Lepeophtheirus salmonis)
AGAAATGTTTTCTTATCTTTTTATTCCAGGAATACCTTAATACACATACT
TAGTCACACAAGTAACATTATTTAGAGTGAAAATCATTTTCAAACACGTA
ACATAAATTATGGGGCCTCCCAAAACTGTTTTGATTACTGGTTGCAATAG
TGGAATTGGATTATGCCTCGTTAAAGAATTCCTAAAAGTGGATAAAGTCA
ACAAAATAATTGCAACATGCAGAAACATTGGTTGATTTAGAATACAACTC
CTGTTTAAAAGTGCTAGAGCTAGATGTAGCCAAATATGAAGGTGACTATA
AAGATTTTGTTGCTCAAGTCTCTGATGAGTTAGGTATGAGAAAATATATT
TTAATGTTAAAAAAATTATAGTTATTTCTAACCTTAGGTTCAGATGGCCT
TAACTTACTTATCAACAGTGCCGGCATTATGGGAGAAACACAGTCCCTTG
GTGATTTGACGTCAGAGGCCATGATAGAAACTTATAAAGTTAATTGTATT
GCTCCAACTATTCTTGCCAGAGCCTTACTCCCACTTCTTAAAAAAGTAGC
AAAGCCTGATGCAGGTTTTGGTTGTGACAATGCTGCAATTATTCAAATGA
GTGCATCAGTTGCACCTATTGCTGAAAATGAATCCGGAGGATGGTATCCA
TATCGTTGTAGTAAAACAGCATTGAATATGGCAATGAAGAATGTCTCCTT
GGAACTAAAGAAAGATGGAATTCTTGTTCTTTCATTGCGTCCTGGTTGGG
TTAAAACAGACATGGGAGGTTCAAATGCTCAAATAACTGTTGAAGAATGT
GTTTCTGCAATGGTCAGAACCCTATGTCAGTTGAGTGACAAGGATCATGG
AGCATTCATTCCATATAATAATACTCCAGGGGCTTGGTAATTCAACACTA
TCCTTAGAAACCAAAACCATGAGAAATATGTGTCTGATTATTGAATTAAT
TGTCTAATTGTGATTTATGAATCATTTTATATATACTCATTTTTTTATTC
ATGGTACCATAGAGTATTATATTTCGCCTTGAAAATATAAATAAAATACA
TAAGAAACTCTT
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