EMLSAT00000000708, EMLSAT00000000708-696555 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000708
Unique Name	EMLSAT00000000708-696555
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s110	supercontig	LSalAtl2s110:876596..884706 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000708 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000708	EMLSAG00000000708-683474	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003056	EMLSAE00000003056-711984	Lepeophtheirus salmonis	exon
EMLSAE00000003057	EMLSAE00000003057-711985	Lepeophtheirus salmonis	exon
EMLSAE00000003058	EMLSAE00000003058-711986	Lepeophtheirus salmonis	exon
EMLSAE00000003059	EMLSAE00000003059-711987	Lepeophtheirus salmonis	exon
EMLSAE00000003060	EMLSAE00000003060-711988	Lepeophtheirus salmonis	exon
EMLSAE00000003061	EMLSAE00000003061-711989	Lepeophtheirus salmonis	exon
EMLSAE00000003062	EMLSAE00000003062-711990	Lepeophtheirus salmonis	exon
EMLSAE00000003063	EMLSAE00000003063-711991	Lepeophtheirus salmonis	exon
EMLSAE00000003064	EMLSAE00000003064-711992	Lepeophtheirus salmonis	exon
EMLSAE00000003065	EMLSAE00000003065-711993	Lepeophtheirus salmonis	exon
EMLSAE00000003066	EMLSAE00000003066-711994	Lepeophtheirus salmonis	exon
EMLSAE00000003067	EMLSAE00000003067-711995	Lepeophtheirus salmonis	exon
EMLSAE00000003068	EMLSAE00000003068-711996	Lepeophtheirus salmonis	exon
EMLSAE00000003069	EMLSAE00000003069-711997	Lepeophtheirus salmonis	exon
EMLSAE00000003070	EMLSAE00000003070-711998	Lepeophtheirus salmonis	exon
EMLSAE00000003071	EMLSAE00000003071-711999	Lepeophtheirus salmonis	exon
EMLSAE00000003072	EMLSAE00000003072-712000	Lepeophtheirus salmonis	exon
EMLSAE00000003073	EMLSAE00000003073-712001	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779968	auto779968	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000708	EMLSAP00000000708	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s110:876596..884706-

protein sequence of EMLSAP00000000708

>EMLSAP00000000708 ID=EMLSAP00000000708|Name=EMLSAP00000000708|organism=Lepeophtheirus salmonis|type=polypeptide|length=821bp
MKCLTFTSAICLLIAPALANEQYWWQDNPNVFSQGGGGSPSNGGNSFGGS
RPQSSSFNNNNNNNGPSSDNSLSHELLTECPAGTRCTVDYYCDINAVISS
VPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPS
FSSSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEA
XWDCPNNEFCXFDGCANTCYFGPASGGESSPSGSNQNSNQQGGRIPRKPN
GNNNRGSSSQSSNSFSGPSGQPGSNNEGFPSNSGFLTGNGGHSGKPGSSN
NNGSPSNSGFQPGSGGHSGTPGSNHNNRGSPSSSGFQPGNGGHSGKNNRG
SSSQNSNSSPIPSGHPGNNNRGSSSSSGFQPGSGGHSSKPGFSSGSNNEG
FPSNSGFQPGNGEHFNNNNRGSSNQPENNGNTGQRTDDSPVVFPGSSPNK
NNGFPSSTNNQPSSGSYSPSTGSQNSPSVSVSCNDKRKCGNVQVVVSGSG
NDPPPRPTPRPSGNVIRNSNCPNNPSPPTGICDGEVDTCWNTGLRDDCSL
GFICCFDGCVKTCYNGTDFLRHLDSPNLIRGTGSNNFQSPSKQQQQSPSG
FPAPTFAASQGNPGQPRPSSNNEFNSPNNNRQQPSGSFPSQNHNGQLQPP
ASGFSPPNQNRQPSQPNNGYLSPGSGNNNRQPSRPNNNGFPSSNNNNRQP
SGTNNGVSSPSRGQPGNGFPNPNKFGQNPQSGSNNRFPSSGNNNNIGGQP
GRPTGQRPSGSNNNFANXATKPYKSCPSAMKCVPKQNCDFNGVMPCVNQN
SGTIDVCCRDPNYKXPWPQNN

mRNA from alignment at LSalAtl2s110:876596..884706-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000708-696555 ID=EMLSAT00000000708-696555|Name=EMLSAT00000000708|organism=Lepeophtheirus salmonis|type=mRNA|length=8111bp|location=Sequence derived from alignment at LSalAtl2s110:876596..884706- (Lepeophtheirus salmonis)
GAAATGAAGTGTCTAACATTTACATCGGCAATTTGCCTTCTCATTGCTCC
AGCCTTAGCTAATGAGCAATACTGGTGGCAGGACAACCCAAATGTATTTT
CTCAGGGTGGTGGAGGTGGCGGAGGATCTAATGGACAGGGGCCTCGAGGK
TTGTTGTCTAATTTTTATTTGGCTATTTTGTTTTATAAATAACTTTTTTA
TATTTTTAAAGGATCTCCTAGTAATGGAGGAAACTCCTTTGGTGGTTCCC
GTCCTCAATCGTCGTCCTTCAATAACAACAACAATAATAATGGGCCATCA
AGTGGTAAGTTTTTTTTGTTTTTTTTTCATTCACTTTATGATGTAATAAC
TTAATGCTAATTCACAAAAGTGTGCAATCCATCTACTTCCAAAAGTTTAT
ATACATAAAAGACTTAATTTATTTTGCAATTTTCAATAAAAAATCTACTA
ATCCAAAATTTTGTAGATCTTTAATTCCATACTTCAATTAAGATCTCTCT
ATTGTAATCCCTTATCATTTTTTAGACAACTCTCTTAGCCACGAACTATT
GACTGAGTGTCCAGCAGGTACTCGCTGCACTGTCGACTACTATTGTGATA
TCAATGCTGTAATTTCATCCGTACCAGTTAAACTAACAAAGGAGGACTTG
CGTAAACGTGGGCATATGATTGTGAGGAAACAAAAAAAGAACTTTTTACT
TTTTAAAAGACACTTTTAACCCATGACTTAAAAAATTTATAATCAGTAGA
TTCCACTTAAYGGGCATCGTTTGACACGTTTTAAAGACATTTTTAAAAGG
AATACTCGGGAAACTCCGTATATTTACCTCATAAGTATACATAGACTATT
AAATCCGAATAATAGTTTTGTATTAATTCATTATAAATGTTACTCTCATA
TCCGATCTGCATCTATAACTTGGTTTTATAGTCTGCATAGATCCTTATCA
ATTTTAAGTACTATTTAGGCCAATTTTTCTTAATTTTTACTTTTAAATTA
TTTTTCCATCTATCTCACCCAACAACAGTGAAAATATGGTTTCCATATTT
GTGAACATTCTGTGTCGTTATTATATGAGGCTCAGAAGTAAAATTTGTGA
AAGAAAAAGGTTCTCTAATTTTTTTATTATAGAATATATGTGTGAACTTA
ATGAAGTTGAGATATTGTAGAATTACACAAACATAGCTTTTATTTTCATT
ATTAATGATGAATAATACAAAAATAATCTTAATCAAAGATCAATAGTGAA
GAAATGAACATGTTTCCAATGCTGGAAGGTTTAAAAAAAAATGTAAACTA
TACTTTGGAACATTCAATTTAAGTGCAATGTGCAACGTCTGTAATGTCTT
CATCAAAATATCATAGAAATTGATGATAATTCGTCAAAGACTAAAAATAC
AACTTAGACTCAATTTCTGATCACAATTGTTCACACTTATTTGTGATTAA
TGGTTTACATTCATAGTAATGTTGCTGTTTATTTGAATTAATTTATTTAG
TTGTATCGGTCCATATTTAGGACTAAAAACTGCAGTCCTGTTCAGTTCTG
TCTTCGTTCGGTGGTCGAGTCCAGTCTTTAAATATATAAAGTTTGGTCCT
TGATTACGCCACTCAACATTATTTCTTCTTTTTTTAATAAGTCTTAGTAC
TGACAGTTTAAGGGACCAACATTCCTAAGGTAGAGTCCAAAGGACTGTTA
GAACTTAAGACTAGACTAGACTAATTGAATAAATAAGGACGGGCACGACA
GTCAAAACACTCAGAGTGATTTTCGCTCTAATCCGGATTTGACTGTATTT
TTAAAGATGTGAATCTGTTTTAGCTAAATAAAAGTAGAAGATTCAATTAA
TCCCATTAAGCAGAATTTACTGTGTCTCAAATTTTCTACAATACAAATAT
ATTATCGACTGTAATATTTTAGCCTTGCTGGCACGAAGAATCTGATAAAT
TTGAAATATGCTGTTCAMCAGCCACTGGTTTTGCTTCTTCTTCTTCTCCC
TCCTTCTCCTCTTCTCCTTCCTTTTCTTCTTCAAATCCCAGCATCGTATC
TGCTAAGCTTACTCTCCCAAATAGAACCCTTGGTAATTAATTCATAGCTT
ATAATTATTAATTTATATCTAACAAAACCTACTAACTTAATTGTACAATG
GAGTATGAGTGTGATTTACTTTATTATCCATTACTATAACTAAATACAGT
AGTGCCGCCTTCCGGAAAATCCATTAGCTTGCTCATACCCCATTTCCCAC
TAAAAATGAAGCTATGGAATATTTAATTTTTTTTAATAATAAACCCAATT
ATTGTCTTATTTCCAGCTCCAGGATCATGCCCCACCATAACGAACAGACC
CCCTGTCTCTGCTTGTCAAGGAGCCAAGTCCAACTGCTGGAGTGTTGGAG
AGGCTGRCTGGGACTGTCCCAACAATGAGTTCTGTYGTTTTGATGGATGT
GCCAATACATGTTACTTTGGACCAGGTGTGCATTTATTTTTAATCTGCTT
ATTTTTTCCTGCATTAATTTTTCAAAGAAATTTACTTTTAATAGCACTTT
GCATGATAATTTTTTGCACCCTAAATTGAATTAATTTCATTTTTTTTCCC
CTCTTGAATTGAATGAACTCCTAATTAAATGTCTTGTAACGGCCCTGAGT
AAAGAATTTGCCTTAAAAACTCCAATCACACTATTTCACTACCTATAAAA
TAATTTATTCCCAGCATCCGGAGGAGAATCATCTCCATCTGGATCAAATC
AAAACAGCAATCAACAAGGAGGAAGAATTCCCCGGAAGTTCATCAGGCTC
TACACCAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
GGCCCATCAACTAATAACAATAATAGACCCAATGGGAACAATAATCGTGG
ATCCTCTAGTCAATCTAGTAATAGTTTTTCCGGTCCCTCAGGACAACCTG
GGAGTAATAATGAAGGATTCCCTAGCAATTCTGGATTCCTAACTGGAAAT
GGAGGACACTCAGGCAAGCCTGGAAGTAGCAATAACAATGGATCTCCAAG
TAACTCTGGATTTCAGCCAGGAAGTGGAGGACATTCTGGTACACCTGGAA
GTAATCATAATAATAGAGGATCTCCAAGTAGTTCTGGATTCCAACCAGGA
AATGGAGGACACTCAGGCAAGAATAATAGAGGATCATCAAGTCAAAATAG
CAATAGTTCCCCCATTCCATCAGGACATCCAGGAAACAATAATAGGGGAT
CTTCAAGTAGTTCTGGTTTTCAACCAGGAAGTGGAGGCCATTCTAGCAAA
CCAGGATTTTCCTCTGGAAGCAACAACGAAGGGTTTCCAAGTAATTCAGG
ATTCCAACCAGGAAATGGAGAACATTTCAATAACAATAACAGAGGCTCAT
CCAATCAACCTGAAAACAATGGCAATACTGGACAAAGAACAGATGATTCT
CCAGTCGTATTTCCTGGATCTTCTCCAAACAAAAACAATGGATTTCCTTC
ATCAACTAACAACCAACCCTCATCTGGTTCATATTCTCCTTCTACTGGAT
CTCAAAATTCTCCCTCCGTAAGCGTTAGCTGTAATGATAAAAGAAAATGT
GGAAATGTCCAAGTCGTTGTCTCTGGCAGTGGTAATGATCCACCTCCAAG
ACCAACCCCAAGACCTTCGGGTAATGTAATACGAAACTCTAACTGTCCTA
ATAACCCATCTCCGCCTACCGGAATTTGTGATGGTGAAGTAGATACTTGT
TGGAATACGGGTCTTCGTGATGATTGCTCTCTAGGCTTTATTTGCTGCTT
TGATGGATGTGTTAAAACATGCTACAATGGAACAGATTTTCTAAGACATT
TAGATTCTCCTAACTTAATTAGAGGTGGTGCTTAAATATTAAAAACCTAA
ACATATAGGAACTGTACATATTTATGTAGTTTAACACATAGTGGTGAAGC
ATTGTTATTTAACTCTTGCATTTTTTCTTTAAACTAAACAACTTACAACT
TACTTATAAATTAGAGTAGTCGTAGTTCATAATTTCTAATCCTGTCTTCA
TATACCGATTGGTTATTTTGTAATAATAAATATTTTTCACAGGCACTGGA
TCAAACAACTTCCAATCTCCTTCAAAACAGCAACAACAGTCTCCCTCTGG
TTTTCCTGCCCCGACTTTTGCAGCCTCTCAAGGCAATCCTGGACAAGTAA
GATTCTTGACAATATTTAATGTTTTTTATCTATAAAAAGTTATTKCMCTT
CCTCTCCATTTAGCCCCGTCCATCAAGCAACAATGAATTCAATTCTCCCA
ATAACAATAGACAGCAACCCTCTGGAAGTTTTCCATCCCAAAATCATAAT
GGACAAGTAAGTGGCAATACGTAAAGTGAGTTTCAATCCTAAATCTGTTC
TTTTTTCAGCTTCAACCTCCAGCAAGTGGATTTTCCCCTCCCAACCAAAA
CAGACAAGTGAGTTAATTGAATCATAAGTAGGTCAATTGAGAACCTAATC
CTGTATTTTACAGCCTTCACAGCCCAATAATGGATACTTATCTCCAGGTA
GCGGTAATAACAACAGACAGGTAATTTGATATTGTCAAATACAATTCACA
TTCATAAAACTTAACTTATTTCTTTATCATCTACAGCCATCAAGACCCAA
CAATAATGGATTCCCATCCTCGAATAACAATAACAGACAAGTATGTTTTT
TTTTTTTAATCAGGTTGAGGGATTTTATTCCTAGCTTATAATCTTATTTT
TAGCCATCTGGAACAAACAATGGAGTCTCTTCTCCATCAAGAGGACAGGT
AATATCCATTATTCTGTATTTAGAATTGTGTTTTCGAATTAATACATCTA
TATATGTNAAGTAAGTTTGAAACTCATTTATTTACAAGGGGTCGATTAGA
TAAACTATTTCTATTTTCAATTTTATCAAAACTTTATTTAGATGAAATAT
TATTATTTGGTGGTGTGAAAGTAGATGTTTCAGAACATGTTCGTRCTCTC
ATATAAAAAAAGAAAAGATGAATAAGTAGCTCATTCTTTTTTTTTCTATC
CAGAACGTGTTTGATTACCGTAATGAGTACAGTTTATTACCTCAATAATC
ATTAGAAATAGGTTGACAAGGATGTTGGGAAAGTGTATAAGCCAAGGTGT
GATAAAACAACCTTGGTTACTGATCTAAAACAACAAATCCGGTCAAATCC
TATAATCATTTCCTTATCCTGTACAAAGAACGTAATTAAAGGTCTTTAAC
CATCTCCAAAAACATTGTTTTTGATATAAGAATAAACGCTTTAAAATGAA
CCACTTAATTAAAAAAAACAATACAGATATGATTTACTGTATGTTGATCT
TTTTGAACGTGTATTGAGTGAGTGATTGCTGTTATAGGTGATCATATTCA
ATAGGTGCATCTTTGCAACGTTAAAAAAAAGTTAAAAAAAAATATTATTC
TCAAAATTTATAGCAAATGACATTTGTATTCTTCCTTGAGTTGTTGTTCA
TTTCTATTAACAAATTATTAGTATTAACCCCTTGGAAGCGCTGCCAATAG
CTCTTACAGGATACAAAATTGATCGTCATAATATAAAATAAAATATGTAT
TTGAAAGGGGTCATACGGCGGAAACCAATGTAAGTCTCACACACCAAATA
AAAGTTTTAAACTATATCTAAACTTCTTAAGTATCTTAACTCATCCCCAA
AATTTGAAAACAAAGTTAGTAACGGATTTTATATGGCTAAGAAATATTAG
GGTGTATGTACCTAATAATTAAGTGATAAATGTATTTTTTTTTTTTTCGT
GATTTTTATTTAAGATTTGTTTTTTTATCGTTGATTTTTCTTTCCATTAT
TTGATCTTGATACTGTTTTAAATATGTTTTTTTAAATAGGTCGGGGGGGG
GGGGGGTGTWTTTAATCGACTCTGAATGTTTTCCTACATCCACGAACCCC
TCTCAAAGTAGATGTCTGAAGAATCATAAGCATATTTCATCATATTTATT
TTACACTTTTATCTTCTTTCCTTTTTAATCATCTAGCCTGGAAATGGTTT
TCCCAATCCCAATAAATTTGGACAAGTAATACGTCGTTGTTTTAAATTTT
ATGTATGACAAATAACATTTTTCTTTTTTTCCGATAGAATCCTCAATCTG
GATCAAATAACAGATTTCCTTCATCAGGCAATAATAATAATATAGGCGTA
TGTTTATTTCATCAATTTAACACTTGTATTGATAGTAATATCATATAACT
TTTTTTTGTTATAGGGACAACCAGGCAGACCTACTGGACAAAGGGTAAGT
CCCTCACTCCAGCTTTTGAGCCATTCTAATTACTATTTATTATCTATAGC
CCTCTGGTTCTAACAATAACTTTGCCAATSCAGCCACAAAGCCTTACAAA
AGCTGTCCCTCGGCCATGAAATGCGTTCCTAAGCAAAACTGCGACTTTAA
TGGTGTTATGGTCAATGAAATCATTACAACAGATCCTAAGTTTGATGACA
TCCGCGTTCCTCTTATTGTAAGTCATACACTTTATGTCCTTTAGGTCAGT
GACCCCTAACCTTTTTCTACCGGCGGACTGGTTAACACTTCACAATTTAC
TACAGACTGGAAGGGTTAGAAATAACCACTGTATTTTTTTATATATGCTG
CAAATCATTTTTGAAGGCCGGTCTCTGCATATTGTGCAGAGAGGACTTGG
TGTGTAGTAATTACCTGTTGTGATAAATCCATAGTTAAACTAGAATTCCT
GGTATTGTCTTCTAACAACTTTCTTTTTCTTGGAAGTCGTAACCAGCTTT
TTTCTTTCTTCATTGTGTATTTTCCACTTTGCAAGTGATGGAGAACGGTC
ATTTGAAAATAAAAGACCGCTCGAATAAGACTAGGACTTTAATAGAGGGT
GACTTACTACTCTATCTACAGCTGGTATGTTAAGAAGAAAACATTAATTA
TGAATGCAAATAGCAATAGAGTGCCGACAAAATTTAGTAGGTATTGAAGC
TGGAGCAATGGAGCAAAATKCTCTCTWCTTTTAATGTGCKCTTTTTTTTT
TCTTCATTTTTTTTTTTTTTTTGACCGCTTAAATGTTATTTTTTTATTAG
TAGAACAGCTATAGAATAAAAAAGGGAATTGAATTGACCCAATTGTGTAA
TGATTATCTTAAAAAATAAAAGAATTTTTTTTATTTGATAACATAAAATA
AAAAGATCAATTAAGAAAAATATTTTAATTCCACAAGATATTCATTACAC
GATTGTTTTAATTAAAGTACTTATTTCCTTTCATAATTATTTTAGTCTAA
TAAAAGCAGCCCTCTTCTGGTCAACAAAAAAAAAAGAAGAAGAAGATGCA
CGCTCCCTGAATAGATAGAAAAGCATATAGGAGACAAGGATTGTGCTAGG
ATTTACCATTAAGTTCACCTAATAATGAATTATTACAATTTGAATATAGT
CTGCAATACCCTATTTAGTGGTTTGGATTTAATCAGTCCTTGTTATATCT
TTTTTTTTAAATCCATACTCTTTTAGCAATACAAAATATTAGCATGGGCT
CTGACAGTCTCGAATACTCCGGATTCAAACAGACCAATATATCAACAAAC
CAATTACCTGAAATGTTTGGAGTATTATTGAACTATAATAGATAACAGGG
GTGTCTGCAGGGGGTGGCCTGGAGGTGCTGTAACCACCCTCCAAATCAAG
TATTTTTTTTATTTATCCGACAAAAATGATAGCTTTGTGTGAAATCTTTA
AAATGTGAATTTTTTTAATAGAAATTAAAGTCGTTTGGGGGTCCAATTTA
GTCCCGGATCAAATTTTGAAAAATTAGCCCCCCCCCCCCTTAAAAATATT
ATGCCCTTGTTAAATGTTATATCCCCTTTTCCGACGTTGAATTTTTGTCC
CAGACATATAATTTTTTTACTTATGCTGCCCAGTTACGCCAAACAGCCAA
ATGGAACGCCTTTCGATTTATTTACTCTATAATATGACTTAATTTTATGT
CACGTATTTTTTTTTTTATATTTATAGCCATGTGTGAATCAAAACAGTGG
AACCATTGATGTATGTTGCCGTGATCCAAATTACAAGGKCCCCTGGCCAC
AAAACAACTGA

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