EMLSAG00000000708, EMLSAG00000000708-683474 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592906281|gb|GAXK01052094.1| (TSA: Calanus finmarchicus comp28945_c4_seq1 transcribed RNA sequence) HSP 1 Score: 98.2117 bits (243), Expect = 3.572e-20 Identity = 47/142 (33.10%), Postives = 66/142 (46.48%), Query Frame = 0 Query: 78 TECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFAXXXXXXXXXXXXXXXXXXXIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTC 219 T+C G +C D +CD + V+LT+E+ R RG + PC ++ + +F++CC + + + L P +CP I PP+ CQG SNCWSVG DC N C FDGCAN C Sbjct: 1135 TQCSEGYKCVRDLFCDATGTMVQFRVELTQEERRNRGKLTPCMNQNTQQFDVCCRKPVILPAIENNEVDK-----------------FQRQELKPTTCPVINILPPIEQCQGRPSNCWSVGVEDTDCIGNALCCFDGCANVC 1509 HSP 2 Score: 62.3882 bits (150), Expect = 5.116e-9 Identity = 33/71 (46.48%), Postives = 40/71 (56.34%), Query Frame = 0 Query: 767 NXATKPYKSCPSAMKCVPKQNCDFNGV-------------------MPCVN-QNSGTIDVCCRDPNYKXPW 817 N A++P+ +CPSAMKCV K NC+FNGV +PC N S +DVCCRDPNYK W Sbjct: 241 NAASQPFVTCPSAMKCVQKVNCNFNGVIVEEQVVLNPEQEIQRVPLIPCFNAARSNAVDVCCRDPNYKDTW 453 HSP 3 Score: 37.7354 bits (86), Expect = 1.660e-1 Identity = 15/33 (45.45%), Postives = 18/33 (54.55%), Query Frame = 0 Query: 532 CDGEVDTCWNTGLRD-DCSLGFICCFDGCVKTC 563 C G CW+ G+ D DC +CCFDGC C Sbjct: 1135 CQGRPSNCWSVGVEDTDCIGNALCCFDGCANVC 1233 HSP 4 Score: 37.3502 bits (85), Expect = 2.237e-1 Identity = 17/56 (30.36%), Postives = 27/56 (48.21%), Query Frame = 0 Query: 77 LTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWH-EESDKFEICC 131 CP+ +C C+ N VI V L E +R +IPC++ S+ ++CC Sbjct: 268 FVTCPSAMKCVQKVNCNFNGVIVEEQVVLNPEQEIQRVPLIPCFNAARSNAVDVCC 435 HSP 5 Score: 34.2686 bits (77), Expect = 2.492e+0 Identity = 21/65 (32.31%), Postives = 24/65 (36.92%), Query Frame = 0 Query: 766 ANXATKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQNSGTIDVCCRDP 811 A + P C KCV CD G M PC+NQN+ DVCCR P Sbjct: 1339 AGNSQLPETQCSEGYKCVRDLFCDATGTMVQFRVELTQEERRNRGKLTPCMNQNTQQFDVCCRKP 1533
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592756809|gb|GAXK01197604.1| (TSA: Calanus finmarchicus comp724195_c0_seq1 transcribed RNA sequence) HSP 1 Score: 89.7373 bits (221), Expect = 9.662e-18 Identity = 52/145 (35.86%), Postives = 71/145 (48.97%), Query Frame = 0 Query: 78 TECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFAXXXXXXXXXXXXXXXXXXXIVSAKLTLPNRTLA---PGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTC 219 TECP+ C D +CD + ISSV V+LTK+D KRG +IPC + + FE+CC G V LP++T++ +CP I PP S+C G S+C++VG+ DC C F GC N C Sbjct: 624 TECPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQNG----------------------VKQSEKLPSKTISSPQKTACPPINTLPPTSSCAGQTSSCYNVGQVDPDC-GGGVCCFQGCVNVC 989 HSP 2 Score: 42.3578 bits (98), Expect = 6.254e-3 Identity = 24/65 (36.92%), Postives = 32/65 (49.23%), Query Frame = 0 Query: 766 ANXATKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQ-NSGTIDVCCRD 810 +N P CPSAM+CVPK NC+F+GV+ PC+N T+ VCCR+ Sbjct: 1104 SNKIKHPQVQCPSAMQCVPKSNCNFSGVITRETVILTQLQEEWRVPLAPCINLGQRRTVHVCCRE 1298 HSP 3 Score: 37.3502 bits (85), Expect = 2.073e-1 Identity = 18/45 (40.00%), Postives = 23/45 (51.11%), Query Frame = 0 Query: 529 TGICDGEVDTCWNTGLRD-DCSLGFICCFDGCVKTCYNGTDFLRH 572 T C G+ +C+N G D DC G +CCF GCV C G + Sbjct: 885 TSSCAGQTSSCYNVGQVDPDCG-GGVCCFQGCVNVCTRGQKVFKK 1016 HSP 4 Score: 33.8834 bits (76), Expect = 2.930e+0 Identity = 18/60 (30.00%), Postives = 26/60 (43.33%), Query Frame = 0 Query: 772 PYKSCPSAMKCVPKQNCDFNG-------------------VMPCVNQNSGTIDVCCRDPN 812 P CPS M+CV Q CD +G ++PC+N + +VCC+ N Sbjct: 618 PQTECPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQN 797
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592863208|gb|GAXK01094354.1| (TSA: Calanus finmarchicus comp49420_c1_seq1 transcribed RNA sequence) HSP 1 Score: 74.7146 bits (182), Expect = 4.936e-14 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQNSG-TIDVCCRDPNYKXPWP 818 A+KP+ +CPSAMKCVPK NCDF GVM PCVN+ +G IDVCCRDPNYK PWP Sbjct: 238 ASKPFITCPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPWP 447 HSP 2 Score: 46.595 bits (109), Expect = 9.141e-5 Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0 Query: 192 SNCWSVGEAXWDCPNNEFCXFDGCANTC 219 S+CWSVG+A +DC +N FC FDGCAN C Sbjct: 508 SDCWSVGQADFDCIDNAFCCFDGCANVC 591
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592863203|gb|GAXK01094359.1| (TSA: Calanus finmarchicus comp49420_c12_seq2 transcribed RNA sequence) HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-14 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQNSG-TIDVCCRDPNYKXPWP 818 A+KP+ +CPSAMKCVPK NCDF GVM PCVN+ +G IDVCCRDPNYK PWP Sbjct: 213 ASKPFITCPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPWP 422 HSP 2 Score: 70.0922 bits (170), Expect = 1.790e-12 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 173 GSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTC 219 GSCPT++N PPVS C G S+CWSVG+A +DC +N FC FDGCAN C Sbjct: 12 GSCPTVSNIPPVSECAGRLSDCWSVGQADFDCIDNAFCCFDGCANVC 152 HSP 3 Score: 33.8834 bits (76), Expect = 1.423e+0 Identity = 15/33 (45.45%), Postives = 17/33 (51.52%), Query Frame = 0 Query: 532 CDGEVDTCWNTGLRD-DCSLGFICCFDGCVKTC 563 C G + CW+ G D DC CCFDGC C Sbjct: 54 CAGRLSDCWSVGQADFDCIDNAFCCFDGCANVC 152
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592863204|gb|GAXK01094358.1| (TSA: Calanus finmarchicus comp49420_c12_seq1 transcribed RNA sequence) HSP 1 Score: 75.0998 bits (183), Expect = 5.805e-14 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQNSG-TIDVCCRDPNYKXPWP 818 A+KP+ +CPSAMKCVPK NCDF GVM PCVN+ +G IDVCCRDPNYK PWP Sbjct: 250 ASKPFITCPSAMKCVPKINCDFEGVMRNEVFNLSPQMEMLRVPLIPCVNRQAGNVIDVCCRDPNYKDPWP 459 HSP 2 Score: 53.1434 bits (126), Expect = 8.465e-7 Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0 Query: 173 GSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTC 219 G CP+ + P S+C G S+CWSVG+A DC +N FC FDGCAN C Sbjct: 58 GFCPSPS---PTSSCAGRLSDCWSVGQADVDCIDNAFCCFDGCANVC 189 HSP 3 Score: 35.039 bits (79), Expect = 7.217e-1 Identity = 16/36 (44.44%), Postives = 18/36 (50.00%), Query Frame = 0 Query: 529 TGICDGEVDTCWNTGLRD-DCSLGFICCFDGCVKTC 563 T C G + CW+ G D DC CCFDGC C Sbjct: 82 TSSCAGRLSDCWSVGQADVDCIDNAFCCFDGCANVC 189
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592863202|gb|GAXK01094360.1| (TSA: Calanus finmarchicus comp49420_c12_seq3 transcribed RNA sequence) HSP 1 Score: 70.4774 bits (171), Expect = 5.807e-13 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0 Query: 173 GSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCY 220 GSCPT++N PPVS C G S+CWSVG+A +DC +N FC FDGCAN C Sbjct: 12 GSCPTVSNIPPVSECAGRLSDCWSVGQADFDCIDNAFCCFDGCANVCQ 155 HSP 2 Score: 37.3502 bits (85), Expect = 5.473e-2 Identity = 18/47 (38.30%), Postives = 22/47 (46.81%), Query Frame = 0 Query: 532 CDGEVDTCWNTGLRD-DCSLGFICCFDGCVKTCYNGTDFLRHLDSPN 577 C G + CW+ G D DC CCFDGC C G + + PN Sbjct: 54 CAGRLSDCWSVGQADFDCIDNAFCCFDGCANVC-QGAGSITPVQPPN 191
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592756808|gb|GAXK01197605.1| (TSA: Calanus finmarchicus comp724195_c0_seq2 transcribed RNA sequence) HSP 1 Score: 64.3142 bits (155), Expect = 3.092e-10 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 0 Query: 78 TECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGF 137 TECP+ C D +CD + ISSV V+LTK+D KRG +IPC + + FE+CC F Sbjct: 624 TECPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQNSF 803 HSP 2 Score: 34.2686 bits (77), Expect = 1.436e+0 Identity = 18/60 (30.00%), Postives = 26/60 (43.33%), Query Frame = 0 Query: 772 PYKSCPSAMKCVPKQNCDFNG-------------------VMPCVNQNSGTIDVCCRDPN 812 P CPS M+CV Q CD +G ++PC+N + +VCC+ N Sbjct: 618 PQTECPSQMECVKDQFCDKSGSISSVRVQLTKQDKAKRGELIPCINAATSLFEVCCKKQN 797
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592842879|gb|GAXK01114665.1| (TSA: Calanus finmarchicus comp175869_c0_seq2 transcribed RNA sequence) HSP 1 Score: 64.3142 bits (155), Expect = 5.928e-10 Identity = 34/68 (50.00%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGV-------------------MPCVNQNSG-TIDVCCRDPNYKXP 816 A+KPY CPSAMKCV K NCDF GV +PCVN+ G +DVCCRDPN+K P Sbjct: 632 ASKPYIRCPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGP 835
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592842878|gb|GAXK01114666.1| (TSA: Calanus finmarchicus comp175869_c0_seq3 transcribed RNA sequence) HSP 1 Score: 64.3142 bits (155), Expect = 6.334e-10 Identity = 34/68 (50.00%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGV-------------------MPCVNQNSG-TIDVCCRDPNYKXP 816 A+KPY CPSAMKCV K NCDF GV +PCVN+ G +DVCCRDPN+K P Sbjct: 629 ASKPYIRCPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGP 832
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Match: gi|592842880|gb|GAXK01114664.1| (TSA: Calanus finmarchicus comp175869_c0_seq1 transcribed RNA sequence) HSP 1 Score: 64.3142 bits (155), Expect = 6.873e-10 Identity = 34/68 (50.00%), Postives = 39/68 (57.35%), Query Frame = 0 Query: 769 ATKPYKSCPSAMKCVPKQNCDFNGV-------------------MPCVNQNSG-TIDVCCRDPNYKXP 816 A+KPY CPSAMKCV K NCDF GV +PCVN+ G +DVCCRDPN+K P Sbjct: 644 ASKPYIRCPSAMKCVQKVNCDFEGVITDEVLDLSPALDMLRVPLIPCVNRQRGNAVDVCCRDPNHKGP 847
BLAST of EMLSAG00000000708 vs. L. salmonis peptides
Match: EMLSAP00000000708 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:876596:884706:-1 gene:EMLSAG00000000708 transcript:EMLSAT00000000708 description:"maker-LSalAtl2s110-augustus-gene-8.13") HSP 1 Score: 1558.12 bits (4033), Expect = 0.000e+0 Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0 Query: 1 MKCLTFTSAICLLIAPALANEQYWWQDNPNVFSQGGGGSPSNGGNSFGGSRPQSSSFNNNNNNNGPSSDNSLSHELLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPSFSSSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCYFGPASGGESSPSGSNQNSNQQGGRIPRKPNGNNNRGSSSQSSNSFSGPSGQPGSNNEGFPSNSGFLTGNGGHSGKPGSSNNNGSPSNSGFQPGSGGHSGTPGSNHNNRGSPSSSGFQPGNGGHSGKNNRGSSSQNSNSSPIPSGHPGNNNRGSSSSSGFQPGSGGHSSKPGFSSGSNNEGFPSNSGFQPGNGEHFNNNNRGSSNQPENNGNTGQRTDDSPVVFPGSSPNKNNGFPSSTNNQPSSGSYSPSTGSQNSPSVSVSCNDKRKCGNVQVVVSGSGNDPPPRPTPRPSGNVIRNSNCPNNPSPPTGICDGEVDTCWNTGLRDDCSLGFICCFDGCVKTCYNGTDFLRHLDSPNLIRGTGSNNFQSPSKQQQQSPSGFPAPTFAASQGNPGQPRPSSNNEFNSPNNNRQQPSGSFPSQNHNGQLQPPASGFSPPNQNRQPSQPNNGYLSPGSGNNNRQPSRPNNNGFPSSNNNNRQPSGTNNGVSSPSRGQPGNGFPNPNKFGQNPQSGSNNRFPSSGNNNNIGGQPGRPTGQRPSGSNNNFANXATKPYKSCPSAMKCVPKQNCDFNGVMPCVNQNSGTIDVCCRDPNYKXPWPQNN 821 MKCLTFTSAICLLIAPALANEQYWWQDNPNVFSQGGGGSPSNGGNSFGGSRPQSSSFNNNNNNNGPSSDNSLSHELLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPSFSSSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCYFGPASGGESSPSGSNQNSNQQGGRIPRKPNGNNNRGSSSQSSNSFSGPSGQPGSNNEGFPSNSGFLTGNGGHSGKPGSSNNNGSPSNSGFQPGSGGHSGTPGSNHNNRGSPSSSGFQPGNGGHSGKNNRGSSSQNSNSSPIPSGHPGNNNRGSSSSSGFQPGSGGHSSKPGFSSGSNNEGFPSNSGFQPGNGEHFNNNNRGSSNQPENNGNTGQRTDDSPVVFPGSSPNKNNGFPSSTNNQPSSGSYSPSTGSQNSPSVSVSCNDKRKCGNVQVVVSGSGNDPPPRPTPRPSGNVIRNSNCPNNPSPPTGICDGEVDTCWNTGLRDDCSLGFICCFDGCVKTCYNGTDFLRHLDSPNLIRGTGSNNFQSPSKQQQQSPSGFPAPTFAASQGNPGQPRPSSNNEFNSPNNNRQQPSGSFPSQNHNGQLQPPASGFSPPNQNRQPSQPNNGYLSPGSGNNNRQPSRPNNNGFPSSNNNNRQPSGTNNGVSSPSRGQPGNGFPNPNKFGQNPQSGSNNRFPSSGNNNNIGGQPGRPTGQRPSGSNNNFANXATKPYKSCPSAMKCVPKQNCDFNGVMPCVNQNSGTIDVCCRDPNYKXPWPQNN Sbjct: 1 MKCLTFTSAICLLIAPALANEQYWWQDNPNVFSQGGGGSPSNGGNSFGGSRPQSSSFNNNNNNNGPSSDNSLSHELLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPSFSSSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCYFGPASGGESSPSGSNQNSNQQGGRIPRKPNGNNNRGSSSQSSNSFSGPSGQPGSNNEGFPSNSGFLTGNGGHSGKPGSSNNNGSPSNSGFQPGSGGHSGTPGSNHNNRGSPSSSGFQPGNGGHSGKNNRGSSSQNSNSSPIPSGHPGNNNRGSSSSSGFQPGSGGHSSKPGFSSGSNNEGFPSNSGFQPGNGEHFNNNNRGSSNQPENNGNTGQRTDDSPVVFPGSSPNKNNGFPSSTNNQPSSGSYSPSTGSQNSPSVSVSCNDKRKCGNVQVVVSGSGNDPPPRPTPRPSGNVIRNSNCPNNPSPPTGICDGEVDTCWNTGLRDDCSLGFICCFDGCVKTCYNGTDFLRHLDSPNLIRGTGSNNFQSPSKQQQQSPSGFPAPTFAASQGNPGQPRPSSNNEFNSPNNNRQQPSGSFPSQNHNGQLQPPASGFSPPNQNRQPSQPNNGYLSPGSGNNNRQPSRPNNNGFPSSNNNNRQPSGTNNGVSSPSRGQPGNGFPNPNKFGQNPQSGSNNRFPSSGNNNNIGGQPGRPTGQRPSGSNNNFANXATKPYKSCPSAMKCVPKQNCDFNGVMPCVNQNSGTIDVCCRDPNYKXPWPQNN 821
BLAST of EMLSAG00000000708 vs. L. salmonis peptides
Match: EMLSAP00000012204 (pep:novel supercontig:LSalAtl2s:LSalAtl2s884:108860:111527:1 gene:EMLSAG00000012204 transcript:EMLSAT00000012204 description:"maker-LSalAtl2s884-augustus-gene-1.10") HSP 1 Score: 108.997 bits (271), Expect = 3.405e-25 Identity = 66/185 (35.68%), Postives = 91/185 (49.19%), Query Frame = 0 Query: 56 SFNNNNNNNGPSSDNSLSHELLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXATGFASSSSPSFSSSPSFSSSNPSIVSAKLTLPNRTLAP-GSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCY--FGPASGGESSPSGSNQN 237 +F N +NG +S + E+ TEC AG+ CTVD +CD+N ISSVP+ LT+E+ RG +IPCWH E+ + ++CC NP K + + L +CP + S+C S C SVG+ C NNE C +DGCAN C P E+SPS + N Sbjct: 47 AFQYTNFHNGSASYSP--PEIRTECQAGSYCTVDMFCDVNVTISSVPLNLTEEEKDDRGELIPCWHVETQEIQVCC-----------------------NPPSDEPKENVKSEDLKDFATCPRVPRAFSESSCSDVASTCASVGKPDQSCLNNELCCYDGCANRCISDLSPEPVEETSPSEAVSN 206 HSP 2 Score: 61.2326 bits (147), Expect = 5.644e-10 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 776 CPSAMKCVPKQNCDFNGV-------------------MPCVNQNSGTIDVCCRDPNYKXPWPQ 819 CPSA+ CVPK+NCDFNGV +PC++ +G+ +VCCRDPNY P+ Q Sbjct: 424 CPSALSCVPKKNCDFNGVIVSHVVSTSPEFDTVRVPLLPCIHPQTGSSNVCCRDPNYVDPYSQ 486
BLAST of EMLSAG00000000708 vs. Select Arthropod Genomes
Match: EEB19342.1 (trypsin, putative [Pediculus humanus corporis]) HSP 1 Score: 59.3066 bits (142), Expect = 5.375e-8 Identity = 26/70 (37.14%), Postives = 35/70 (50.00%), Query Frame = 0 Query: 770 TKPYKSCPSAMKCVPKQNCDFNGVM-------------------PCVNQNSGTIDVCCRDPNYKXPWPQN 820 T P+ CP+A+KCV + C ++G+M C N +G I CCRDPNYK PWP + Sbjct: 602 TTPHVGCPAALKCVEESYCTWDGIMSETPVTLTREEAENKVPLSDCQNIETGVIGKCCRDPNYKDPWPSD 671
BLAST of EMLSAG00000000708 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold230_size244653-snap-gene-0.16 (protein:Tk08243 transcript:maker-scaffold230_size244653-snap-gene-0.16-mRNA-1 annotation:"serine proteinase stubble-like") HSP 1 Score: 133.265 bits (334), Expect = 3.396e-32 Identity = 83/222 (37.39%), Postives = 117/222 (52.70%), Query Frame = 0 Query: 76 LLTECPAGTRCTVDYYCDINAVISSVPVKLTKEDLRKRGHMIPCWHEESDKFEICCSXAT----------GFASSSSPSFS---SSPSFS----SSNPSIVSAKLTLPNRTLAPGSCPTITNRPPVSACQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCYFGPASGGESSPSGSNQNSN-----QQGGRIPRKPNGNNNRGSSSQSSNSFSGPSGQPGSN 275 + TECPAGT+C D++CD NA++ + V L+ R RG+++PC ++++ +F++CCS A+ + PSF + PSF SS + + N ++ GSCP I P +++C G KSNCWSVG+A DCPNN C FDGC N CYFG +G P + Q SN QQ P NN + Q SN+ P+ QP N Sbjct: 108 VQTECPAGTKCVGDFFCDENAIMVNYRVDLSPAQKRNRGNLLPCMNQQTGQFDVCCSTASPGSQGNNRPSSQGQQNQPSFQGQQNQPSFQGQSGSSQNNNNPGNNQISN-SIPQGSCPNIGALPDIASCNGMKSNCWSVGQADVDCPNNALCCFDGCRNACYFGAGNGNAPPPRPAPQQSNNRPAPQQSNNRPAPQQSNNRPAPAPQQSNNRPAPAPQPSFN 328 HSP 2 Score: 78.5666 bits (192), Expect = 3.788e-15 Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0 Query: 520 NCPNNPSPPTGICDGEVDTCWNTGLRDDCSLGFICCFDGCVKTCYNGT--DFLRH 572 +CPN P+ C E DTCWNTG RDDC+ GF+CC+DGC KTC N DFLRH Sbjct: 398 DCPNMSPLPSADCAAERDTCWNTGKRDDCARGFLCCYDGCSKTCLNTQTGDFLRH 452
BLAST of EMLSAG00000000708 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold120_size336265-snap-gene-0.6 (protein:Tk08782 transcript:maker-scaffold120_size336265-snap-gene-0.6-mRNA-1 annotation:"hypothetical protein") HSP 1 Score: 50.447 bits (119), Expect = 3.496e-7 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0 Query: 187 CQGAKSNCWSVGEAXWDCPNNEFCXFDGCANTCYFGPASGGES 229 C G SNCWS G+ DCPN C FDGCANTC GP + +S Sbjct: 91 CAGTVSNCWSPGQGDTDCPNFGLCCFDGCANTCVDGPTAISQS 133 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000708 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000708 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000708 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000708 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000708 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000000708 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000708 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s110:876596..884706- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000708-683474 ID=EMLSAG00000000708-683474|Name=EMLSAG00000000708|organism=Lepeophtheirus salmonis|type=gene|length=8111bp|location=Sequence derived from alignment at LSalAtl2s110:876596..884706- (Lepeophtheirus salmonis)back to top Add to Basket
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