EMLSAT00000000734, EMLSAT00000000734-696581 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000734
Unique NameEMLSAT00000000734-696581
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1118supercontigLSalAtl2s1118:124831..127769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000734 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000734EMLSAG00000000734-683500Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003170EMLSAE00000003170-712098Lepeophtheirus salmonisexon
EMLSAE00000003171EMLSAE00000003171-712099Lepeophtheirus salmonisexon
EMLSAE00000003172EMLSAE00000003172-712100Lepeophtheirus salmonisexon
EMLSAE00000003173EMLSAE00000003173-712101Lepeophtheirus salmonisexon
EMLSAE00000003174EMLSAE00000003174-712102Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772774auto772774Lepeophtheirus salmonispolypeptide
polypeptide-auto772776auto772776Lepeophtheirus salmonispolypeptide
EMLSAP00000000734EMLSAP00000000734Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000734

>EMLSAP00000000734 ID=EMLSAP00000000734|Name=EMLSAP00000000734|organism=Lepeophtheirus salmonis|type=polypeptide|length=220bp
MFNMRSSKSMMILVACLFLGSTHAHNLNRRDTGASYSGGAVASSYDGGAP
SSSYDAGSASGYAAPSQGYGAPSSGYVESSGTGISGDYGDEPEFPFAAII
LPILALIGLALLFPTITTVGVVPPVGRRKRSLIDGSEEGSGPMGRVLDRV
NDIYFSMIESEECMERIACEVGGIAKDFGLNSSPVTKMIDPLVTKKYKTY
YKQFASGRNCQKIKCGSFSL
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mRNA from alignment at LSalAtl2s1118:124831..127769+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000734-696581 ID=EMLSAT00000000734-696581|Name=EMLSAT00000000734|organism=Lepeophtheirus salmonis|type=mRNA|length=2939bp|location=Sequence derived from alignment at LSalAtl2s1118:124831..127769+ (Lepeophtheirus salmonis)
TGCAAACGATCTTCTAACTTTTTTAAAATAACAAAAATAACTCACATTAT
GTCCTCACTGGGAGCTTCCTCTTTTTCTTCCGCAAGACTTCCTGGGTCTT
TCTCTTCCTCTTCTATTTCGGAGGCTAGAGATGGCCTAGTTGCTAGTCAC
AGCGGMGAGACACACTCTCATGAAGCAAGCATKCCCGCTGCTTCTTTCTC
ATCTCTGGTCTATCAGAAGCCTCTCTCATACGGAGAGGAAACTGAGTTCC
TCCCTGATCTTACTCCCTTAATCCTTGGTATCCTCGTAATAACGGGTTTG
AGTCTCCTTTTTCCTACCTTCATTTCCGTCTCTACTTCTCGAAGGAAACG
GGATTTACCTGAAGGTATGTAGGCATCCAGTCCTAACCTTGCCTGCATGC
TCTTTTATTCTCTGGTGGTGGTATCGGTGGATTTAGGAAAAACAAATATA
AAGACTAATCCTTACTCTGCGGCTCATTTAATTTGTCCTTATAAAAAAAA
GTGTATTTATTTTATCTTTATTCGACATACAATAATCATATTCACTCAAA
TTCTCCAATCGAATCGTTTAGCTAAGTTTCGACGTTAACTTAATAAATCA
ATTAACAATGGCAGCCAAATTAGTTTACGCATCAATGGTGGCGGCAGCAT
CTGCTCACTCCCTCTATGTTCGGGACACAGACGTTAAGGTTAATAGGGAT
TCTTATGGAGCACCAGCTCCAGCTTCTTACGGAGCTCCTGCTCCCTCCTA
CTCAGCCCCTGCCTCCTCTTATAATGCTCCTTCATCCTCATACTCTTCAG
GCGGGTCCTCTTACTCTGCTCCCGAAACTGGTTATACCTCTCCTTCGGGT
TACGGAGAAGAAACGGGAGGACTTGACCTAACTGCGATCATTATCCCTCT
TTTAGCCCTTCTCGGTCTGAGCCTTTTGTTCCCAACATTTGTGAGCGTAA
CTGCCAGGCGTAAGCGTGATGTTGATGAGATTGGTGAAGGTGAGTGACCT
TAGTGCCTAATTTTTATTTTTTTCTTTTTCTTATATTGCAGCAAAATTAT
TAACACGAATCTACCAGACTTTTTTTAATACAAATTATACATTTCAAGTC
CTTTCTAAGCTCAAATTGAAAGGTCCCTTCTTAGCTCTTCTTGCTTATTC
CTGTTACAACAATTTTCTTAGACTTAAATTACACAAATATCATGTTCAAC
ATGAGATCCAGCAAATCCATGATGATCCTTGTTGCCTGTCTCTTTTTGGG
AAGCACACATGCCCATAACTTAAATCGCCGAGATACCGGCGCAAGTTACA
GTGGAGGTGCAGTAGCATCTTCTTATGATGGAGGCGCTCCATCCTCTTCT
TACGATGCTGGGAGTGCCAGTGGGTACGCTGCACCATCCCAAGGCTATGG
AGCCCCCTCTTCTGGATATGTTGAATCATCTGGAACGGGRATTTCTGGCG
ACTATGGTGATGAGCCAGAATTCCCTTTTGCTGCCATTATTCTTCCCATT
CTAGCTCTTATTGGACTGGCTCTCCTTTTCCCTACAATCACAACTGTGGG
GGTTGTCCCACCCGTAGGAAGACGAAAGAGATCTCTCATTGATGGAAGCG
AAGAGGGTAAGTTCTTCTCTGTGGTGCTTGTTTGTTTGTTTGTCTATTGC
AAGTTCAAGTTTCAAATGTTGGAGGAATTTCAACATTTGAATGTAAAAAC
AAACAAATTTGTCCGTTTCAGTTGTGTCCGTCCATTCTCGTTAGTGTTGT
CAATTTCGTCTCGTCTTTATCTATTATATTACATATGTTCTGCCTTTGTG
ACTCGTCCCTCCAATATGTCTGTCCGTCTTTGGGTTTGTGCTCTTATACA
TATATATTTATAATTTTTATTCATATATTTTGTTTTTATTGCCATGCTAC
TACAATAACCACTTTCACAATTCATTTTTTTTTTTCATTGTTGGTCTTCC
GTTAGGAGTTCTAATGCTTTTGTCCATTCTACTAACACTACCTATAATAT
ATATTTTTGTTTTGTATTTGTCTCTGGTGTTTATCCGTGTCATTTTTATG
TCTAATGCTGCTTCAAAGTTATGCCACAATTGGATTTAGAACGAAAAATT
TACCTATAAAGTAACAAAAAAAAACAACACCTTAAAGTCATATTCTGTTT
CCAATTTGTGTCATATGCTTTAACCTCACTCCTTCTTACCCAGCCCAGTA
AATAACATTTTCTTCCCTTCATATTTCTTATATAGGATCTGGACCCATGG
GCAGAGTTTTGGACCGAGTCAACGACATTTACTTCTCCATGATTGAAAGC
GAAGAATGTATGGAAAGAATTGCCTGTGAAGTTGGTGGAATCGCTAAGGA
TTTCGGACTTAATAGCTCTCCTGTTACAAAGTATGACTCCTAGCGACTTC
AGGGCATTCCTAGAACCCACTTAACCCCTGTTTTATTATCTTTACAGAAT
GATTGATCCTCTTGTCACCAAGAAATACAAGACCTACTACAAGCAATTCG
CCTCTGGAAGGAACTGTCAAAAGATCAAGTGCGGATCTTTTAGTCTATAA
ATAAATTCCGTCCGAATCATTCTATTCAAAACCTCTCAACAACTACTCAA
AACTCCTACTAAAACTTCTGGGTCGCTTCTGAAATAGAAAGAAGAACTTT
TGAATATCTCCTTGATATTTTCCCCGTTTTGATAACTGTTTCAACAACAA
CTCTATTCTATTTCCTAGCTGGTACTGGGTTCCTTCTCAAGGATCGTCAC
CTTGGTCTTCTCTATATCTTTTTCCTTACTTACTTCTTCATTCCGTCTTC
AATTTTATTTTGCTTGACTACATACACTTATTTTGTAGTCAATTTCTGTC
TCTCTTCCCCCTTCATCTGACCCATTTTTAGTATTACACTTCAAGGCATT
CTATTTTTTTATATATATCTACTACTATTTACAAGAATT
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