EMLSAT00000000800, EMLSAT00000000800-696647 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000800
Unique NameEMLSAT00000000800-696647
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1136supercontigLSalAtl2s1136:166219..166824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000800 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000800EMLSAG00000000800-683566Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003511EMLSAE00000003511-712439Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773711auto773711Lepeophtheirus salmonispolypeptide
EMLSAP00000000800EMLSAP00000000800Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000800

>EMLSAP00000000800 ID=EMLSAP00000000800|Name=EMLSAP00000000800|organism=Lepeophtheirus salmonis|type=polypeptide|length=201bp
MCLNWFGFTMGYYGLVYNTPTYDFNIYLVFVFPTFFAIPLNFVIPLIENH
IGRKPLLTGSMILSGVALLVSLTLVGHNWPVTMCSIFGTVVSFAAMSSGY
IFCKELFPTVLRTTALSFATVAARLGSILSPIVGSLDRIHPALPIGVYGL
VSLTGGILSIWLWPETKNIRLPDTLGECEAAASTTNPWCKKCSKXHQPSE
D
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mRNA from alignment at LSalAtl2s1136:166219..166824+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000800-696647 ID=EMLSAT00000000800-696647|Name=EMLSAT00000000800|organism=Lepeophtheirus salmonis|type=mRNA|length=606bp|location=Sequence derived from alignment at LSalAtl2s1136:166219..166824+ (Lepeophtheirus salmonis)
ATGTGTTTGAACTGGTTTGGATTTACTATGGGCTACTATGGACTTGTGTA
CAATACACCGACGTATGATTTCAATATCTACTTAGTCTTCGTATTCCCAA
CATTTTTCGCCATTCCTCTTAATTTCGTCATTCCATTGATAGAAAATCAC
ATTGGAAGGAAGCCTCTATTAACAGGAAGCATGATATTATCTGGGGTTGC
TCTCTTAGTCTCATTAACCCTCGTAGGCCACAATTGGCCAGTCACAATGT
GCTCCATATTTGGAACAGTCGTTAGTTTCGCTGCCATGTCTTCAGGTTAT
ATTTTCTGTAAAGAACTTTTTCCAACTGTACTTCGAACGACAGCTCTCAG
CTTTGCAACCGTCGCCGCACGTTTAGGGAGTATTTTGTCCCCGATTGTTG
GTTCATTGGACAGGATACATCCGGCATTGCCTATAGGTGTATATGGCTTA
GTTAGTTTGACTGGAGGGATCCTGAGCATTTGGCTTTGGCCAGAGACAAA
AAACATACGACTTCCGGATACATTGGGAGAATGTGAGGCTGCAGCATCAA
CAACTAATCCCTGGTGCAAAAAATGTTCAAAAGNTCATCAACCTTCTGAA
GATTGA
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