EMLSAT00000000842, EMLSAT00000000842-696689 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000842
Unique Name	EMLSAT00000000842-696689
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1142	supercontig	LSalAtl2s1142:167553..175470 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000842 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000842	EMLSAG00000000842-683608	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003683	EMLSAE00000003683-712611	Lepeophtheirus salmonis	exon
EMLSAE00000003684	EMLSAE00000003684-712612	Lepeophtheirus salmonis	exon
EMLSAE00000003685	EMLSAE00000003685-712613	Lepeophtheirus salmonis	exon
EMLSAE00000003686	EMLSAE00000003686-712614	Lepeophtheirus salmonis	exon
EMLSAE00000003687	EMLSAE00000003687-712615	Lepeophtheirus salmonis	exon
EMLSAE00000003688	EMLSAE00000003688-712616	Lepeophtheirus salmonis	exon
EMLSAE00000003689	EMLSAE00000003689-712617	Lepeophtheirus salmonis	exon
EMLSAE00000003690	EMLSAE00000003690-712618	Lepeophtheirus salmonis	exon
EMLSAE00000003691	EMLSAE00000003691-712619	Lepeophtheirus salmonis	exon
EMLSAE00000003692	EMLSAE00000003692-712620	Lepeophtheirus salmonis	exon
EMLSAE00000003693	EMLSAE00000003693-712621	Lepeophtheirus salmonis	exon
EMLSAE00000003694	EMLSAE00000003694-712622	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773722	auto773722	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000842	EMLSAP00000000842	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1142:167553..175470+

protein sequence of EMLSAP00000000842

>EMLSAP00000000842 ID=EMLSAP00000000842|Name=EMLSAP00000000842|organism=Lepeophtheirus salmonis|type=polypeptide|length=1202bp
MTSPLNWIRDELHRVSGISDVSIAEFFLDLSAKSLSETDLEDRIQKTETL
DVGDPLVLEFVRGLWSRIPRSGPSEGVKRRMEARAMEAAARAEKSKNEAY
QLLSDEDEEIPKKRKKKKKKASKDVQEKEDDIDKMEREREEDLKERDAFA
KRMLAKDKEKTRKVTEKSDSRAYAEAAKRLEIEASDKDKMVPELRKESRR
AYLAKRKVDKLVELEDDVQDDEFLFEKEILTEKEIKERDYKKTILALSKE
HDKAAEVEKVHRYHMPDGSKNELDSYVEVDEKEKAPHYEQRKWEEEHMNN
ARFSFGAKDAKKKYEKKYEYILDDEIEFVQTFKMPGTKKDEKESELNETQ
KKRMSIEETKKSLPVYPFRKSLIEAINEHQVLIIEGETGSGKTTQIPQYL
YEAGFTKDGKKIGCTQPRRVAAMSVSSRVAEEIGIKLGNEVGYSIRFEDC
TSERTVLKYMTDGMLLREFLSEPDLSSYSVMIIDEAHERTLHTDILFGLI
KDISRFRSDLKLLISSATLDAEKFSEFFDDAPIFRIPGRRFPVDIYYTKA
PEADYIDACVVTVLQIHVTQPLGDVLVFLTGQEEIETCQEILVERTRKLG
SKIKELLIVPIYANLPSDLQAKVFEPTPKGARKVILATNIAETSLTIDNI
IYVIDPGFNKQNSYNARTGMESLIINPVSKASANQRAGRAGRVAPGKCFR
LYTAWAYQHELDDNAVPEIQRVNLGNVVLLLKSLGINDLIHFDFLDPPPH
ETLVLALEQLYALGALNHMGELTKLGRRMAEFPCDPMMSKMIIASEKYKC
SNEILTIAAMLSNNSSIFYRPKDKIIHADTARKNFFVNGGDHLTLMNVYN
QWRDTDYSTQWCYENYIQYRSMRRARDIRDQLEGLLERVEIDIISNPNEV
QSICKSVTAGYFYHTSRLSKGGNYKTVKHNQSVMIHPNSAMFEDLPRWVI
YHELVFTTKEYMRNVIEIKNEWLLEVAPHYYKAKELDDSTTKKMPKTAGK
ARCNCAKDNINEDAAGQFNLYQKIDMEKLTTLNEVTEDSGKSVFRSWEDR
LKRDQFVESDADEELLFNVPFSGIVKLKGIVVIGGEEGRNPSRIRLFKNR
PFMTFEDAEGKSDQEFELAFDQDGSLTYPTKAVTFSSVEHLSIHFPSNQG
NRDSSKIFYIGLKGDFIKSNRVGVVTAVYESRPMLEDHKTDLKNEATNQL
NF

mRNA from alignment at LSalAtl2s1142:167553..175470+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000842-696689 ID=EMLSAT00000000842-696689|Name=EMLSAT00000000842|organism=Lepeophtheirus salmonis|type=mRNA|length=7918bp|location=Sequence derived from alignment at LSalAtl2s1142:167553..175470+ (Lepeophtheirus salmonis)
TTTAGGAAAATAAATCATATATTCGTGGTTGAGTGATAGTAATGTAAATA
ATGTTACGCGATATTTAATCATGTGGCGCTTCAATTTATTATCATAATAA
TGTAAACAATAACAGACGAGGTGGAATCCGAATATAAAATTAAAATATAT
CATCAAACATGACTTCGCCGTTAAATTGGATCCGTGATGAACTACATCGA
GTTTCGGGTATTTCCGATGTGAGTATTGCAGAATTTTTCTTGGATTTGTC
TGCCAAAAGTTTATCTGAGACGGATTTGGAAGACCGAATACAAAAGACGG
AGACTCTTGATGTTGGCGATCCTCTTGTTTTGGAGTTTGTAAGGGGCCTT
TGGTCTAGAATACCCAGATCAGGGCCATCAGAAGGGGTGAAACGAAGGAT
GGAGGCTCGTGCAATGGAAGCKGCAGCACGAGCGGAGAAGTCGAAGAACG
AAGCTTATCAACTCCTCTCTGATGAGGACGAAGAAATCCCTAAAAAGAGG
AAGAAAAAGAAGAAAAAAGCCTCGAAAGATGTCCAAGAAAGTATTTTACA
TCTCCACTCAACTTGTTTCATTAGAATTATTATCATTATTTATTTGCATT
CCTTTATAGAGGAAGATGATATCGACAAAATGGAGCGAGAGAGGGAAGAA
GATCTCAAGGAAAGAGATGCTTTTGCCAAGCGAATGTTGGCCAAAGATAA
AGAAAAAACAAGAAAAGTAACAGAGAAGTCGGATTCGAGAGCTTATGCAG
AAGCTGCAAAGAGATTAGAAATCGAAGCCTCTGATAAAGACAAAATGGTC
CCTGAACTTCGCAAAGAGTCAAGAAGAGCTTATTTAGCAAAGCGAAAAGT
GGACAAATTAGTCGAATTAGAAGATGATGTACAAGATGACGAATTCCTAT
TTGAAAAGGAAATCTTGACTGAGAAAGAAATTAAAGAGAGGGATTACAAA
AAAACGATATTGGCTTTGAGTAAAGAGCACGATAAGGCTGCGGAAGTAGA
GAAAGTTCATCGTTACCACATGCCGGATGGATCCAAAAATGAATTGGATT
CCTATGTTGAAGTGGACGAAAAAGAAAAGGCTCCCCATTATGAACAAAGG
AAATGGGAAGAAGAACATATGAACAATGCTAGATTTTCTTTTGGGGCTAA
GGATGCCAAAAAGAAATATGAGAAAAAGTATGAGTACATTTTAGATGATG
AAATAGAATTTGTACAAACCTTCAAAATGCCTGGAACTAAAAAAGATGAA
AAAGAGTCTGAACTAAATGAAACTCAAAAAAAGAGAATGAGTATTGAAGA
AACCAAAAAATCTCTCCCAGTTTATCCATTTAGGGTATAATATATTATGT
GGGCCCAGTGTAATAAAAGTGTAACAAGACCATTTTTCTCAAAAAGTAGA
TTTTTAGCTCCAATTTATTTCTCCATATTTAACAAATACTGTAAAATCTA
CGTTTAACAAATGCAACATTATTAAGAATTTCTTTGATAACTTCAAAACT
TTAATTGCTGACAATAATATTACAATTGCTACATTAGTACTTTAGACCCA
CAATTCATTTATTTAAATCTGAAGGTTTTTATTAATTCATTTTTTTTTTA
TCTACAAGAAATCCCTCATTGAGGCTATCAATGAGCATCAAGTTTTGATC
ATCGAAGGGGAGACCGGCTCAGGGAAAACGACTCAAATACCTCAGTACTT
GTATGAAGCAGGATTTACAAAGGATGGTAAAAAAATTGGTTGTACACAGC
CTAGGAGAGTTGCTGCCATGAGTGTGTCATCTCGGGTTGCTGAAGAAATT
GGTATCAAATTAGGTAATGAAGTGGGCTATTCGATTCGTTTTGAAGATTG
CACATCAGAAAGAACTGTTCTAAAATACATGACGGACGGAATGCTGTTAA
GAGAGTTTTTGAGTGAGCCTGATCTTTCCAGTTATTCTGTCATGATAATC
GATGAAGCTCATGAACGTACTCTTCACACTGATATTTTATTTGGACTAAT
TAAGGTAAATAATCAATTATTTTTCATATTTTTGATTTTATTGATTTATG
AAATTAAATATATATTAGGACATATCTCGGTTTCGATCTGATTTGAAATT
ATTGATAAGTAGCGCTACATTGGATGCAGAAAAGTTTTCTGAATTTTTTG
ATGATGCTCCCATTTTTCGTATACCGGGTCGTCGGTTTCCAGTTGATATT
TATTATACTAAAGCACCTGAGGCGGACTATATTGATGCCTGTGTTGTTAC
AGTATTACAAATTCACGTAACACAACCTCTTGGAGATGTGTTAGTATTTT
TGACTGGTCAAGAAGAAATTGAGACATGTCAAGAAATATTGGTTGAAAGA
ACTCGAAAATTGGGTTCCAAAATCAAAGAACTTCTCATAGTTCCAATATA
TGCTAATTTACCGTCCGATTTGCAGGTATTACTTATTCTTTTATCATTAT
GTTAGTGTATGGTTACTACACATATAGTTCTAATAGGCTAAAGTGTTTGA
ACCCACTCCAAAAGGAGCTAGAAAAGTTATTCTCGCCACAAACATAGCAG
AAACATCTTTGACCATTGATAATATTATTTATGTTATTGATCCGGGGTTT
AACAAACAAAATTCATATAATGCCAGAACGGGAATGGAATCTCTTATTAT
CAACCCTGTCTCCAAGGCTTCTGCTAATCAACGAGCTGGAAGAGCAGGAA
GAGTTGCGCCTGGGAAATGTTTTCGCCTTTACACCGCTTGGGCTTACCAG
CACGAGTTGGATGATAATGCTGTACCTGAAATCCAGAGGGTTAATTTGGG
TAATGTTGTGCTTTTGTTGAAATCCTTAGGTAATATGATTAGCGTTTTTG
AGTTGATTTAGTTTTCTAGGTTTATGTAAACATTATTTTTTTTGTAATTA
GGAATCAATGATCTTATACATTTTGATTTTTTGGACCCACCTCCTCATGA
AACTTTAGTTTTGGCATTGGAACAACTCTACGCTCTTGGCGCGCTTAATC
ATATGGGAGAATTGACAAAGCTTGGTCGTCGAATGGCCGAATTCCCATGC
GACCCTATGATGTCTAAAATGATCATTGCCTCTGAAAAATACAAGTGTTC
TAATGAGATCCTAACCATTGCAGCTATGTTAAGTAATAATAGCTCAATTT
TCTATCGTCCTAAAGATAAAATTATTCATGCTGATACTGCTCGCAAAAAC
TTTTTTGTCAATGGTGGAGATCATTTAACATTGATGAATGTGTATAATCA
ATGGAGAGACACAGACTATTCAACGCAATGGTGTTATGAAAATTATATTC
AATACAGGTTAAAGATTGAAAATATAAGTAATTATATTCATTTGTTTCAT
TTCCTCAATTTCAGGTCAATGAGACGTGCAAGAGACATACGAGACCAACT
TGAAGGTAATTTTGGATAATTACATAACAAGACCCGTAAATGATGTTTAT
TTAAATTTAGGTTTACTGGAACGTGTGGAAATTGATATCATATCAAATCC
CAACGAAGTTCAAAGTATATGCAAGAGTGTTACTGCAGGATATTTTTATC
ATACCTCAAGATTAAGTAAAGGAGGAAATTATAAAACTGTCAAACATAAT
CAGAGTGTCATGATTCATCCTAATTCTGCCATGTTTGAAGACTTGCCTCG
ATGGGTCATCTATCATGAACTAGTCTTTACAACAAAAGAATATATGAGAA
AYGTTATTGAAATAAAAAATGAATGGCTTCTTGAGGTAGCTCCTCATTAT
TATAAAGCCAAAGAGTTGGATGACTCAACTACCAAAAAAATGCCCAAAAC
GGCTGGSAAAGCAAGTGTCGATTTAAAAAGCCTAATATGAAAAATTTACC
ATATATAAAAAATAATAAAAACAAATTATTTATTCATACAGATCAATGTA
GTATATGTACTCTTTTAATTTTGATTTGAATAAAATCTTATTTTTCTAAT
TGTGTGTTCATCTTTTATTTCTATATATGGATAGAATTTGATCAATATTA
CAATATTAACAATGTCAGATGCCAACATTTGAAACTGTCATCTTAGCTAG
GAAGTAAATTTATTTACACTCAATATTTTCCGTATATTCACTCAACCTCT
ACCACATATCCACTACGACAATAATAATAACATCAAAGTTAGTCGCCGTT
TGCCTTTTAGTACTAGTTTCCCTTGAAAAATTGAATAAATACAACATGGC
TCATCATGATCATTCGGGAGGTAAGCAATAGATATATTCATGAAAACGGA
ATTCATTATTTTATAAGGGTAAATGATTTTTCAATATGTTTGTTTTGTTG
GCTGATTTTTTTCGCCGAAATAATTATAATATATAAAGTTTTTACATTAT
TAACCATGACTCAATTAGAATGATTTATCATAAGATGCATTTCCTTTATT
ATTCGGTCTATGGACAACTAAGGAATGTAGGTGAAGACTGGGGACAGTTG
TAACAGGGCCTTTTTTGAACATCATAAAAAAGCGATAGCCACAAAATTAA
TAATACAAGTCAATTGAATAATATAGTCCAGATTATTGTGGCAAAAAAAC
TATCATATTTGTCATTTTATCCTTGAGATAGTTTATAATGTCGTTCGTTT
TTCATTGTTTTATGTGTAACTTATATCATTTGAATATTATATTTAATGAT
TTCTTAGATAACAGTTGATATAATTTTATCAGCTTCATCAGTGTGCAATT
TTCCATGTATTGTTATTTTTCTATATATTTACACTTCAAATCAAACATGT
TTCTATAGAMAAGCCAGTGTCTTGAAAGGTTTTATAAGAGTGAATTCATC
CAATCTGTTATACTGATCCGTAATTCATCATATGAATTTGATTATATCTC
AATCTGCTGTAGTACTTTGAAATTTAAAAATTCAACACCTTAAAATATTT
AGTTATTTATTCCTCAAAAAATATTTTTTGGTTGTATAATTTTGTTCATT
TTTTAACTGTTACGGAGACAGATACGACATTTGACGAGTCATATTCAAAT
GTAATTTGTGGAAAAAACTACTTTTGATACTTAATCTATTAGATTAAAAA
AAAATAGCCAACATATGTAGTTAAGTTGTGTTAAATTTGAGTATATCTAT
TATATGTAAAATATACATTTCAAAATGTATACATATATTTAGGGCCGTTT
TTAGCGTTAACTGGTTTTGGGGCAAAGATAAATGTGTGGCGCCCTTTTCA
TTTTTTCCTTTTAAAAAAAAAGGTCGATTCTTTTTCTATTTTTATAATTA
CTTCTTCTTCGTGTATTTAATTAAACTTTTTGAAAATTATGTACACTTTG
GGACCACCAGTCAAAAGCGGTACCTGGGACAAGTACCCTCTCCCCTACAT
TGGTTCTTTAGTAATGCGCTGAACTCCAAAGTTGCAGACCTTCTGACTCA
CCTTATATAGACTATATTTACACAATGATTTAATGTGATTACATATCTTG
ATACTTATCATCAATAACATTATCCAACACAATTTTTGCCCAATTTGGGC
TTTAACCCCTTTTATTTTATTTTTAAAACACGTTTTTGAGTATAATTTCG
ATTCAATGCCATATTTTGAAATGAAATAAAAAAAAGTCTAGATAAAAATT
TAAGATAATAACAACTTATAAAAACATTCTATCATTCGAATTATAAATAA
TTTATTAAGTTATCTTGAATACAGTTCCTATAAAATGTGTCTAATCATAC
AAAAATCCGGTAAAAGGAAGGATTGTATATAGAAACTAATATTTTTCATA
TTTTTTTTAATTGCTTTATATTATAACTAAAACTAAAAGAATAAACCTGA
TATTCCAACTTCAAAAGATTTGCTGATTTTTCTAGTTTAAATGTTAATTT
TCTTATAGAATATTTAATAAATAAGCAATATAAGTTTGCTTGAAGATGGC
TCAAAATTAAATATAACTGATTTTGTCAAAAAAAAAATTTACGTATAAGT
AATCTAATCGAATTATTTATATTTAATTTCTGAATTTTTCTTGCATCTAA
AATATTCATTACTTCTTAAGTCAAATAATTGTCTTAATTATATTTAATTT
CGAAACATTTTCACGTAACGTCTTTCCCTGATTAATTTATAGTCCAAGCT
GTATTTAAAATTTTCCGAATTTATACTAGATTACACTTCTTTTCTAAAGC
TTGAACAAAAAAATGATGATATCATAAGCATAAAAGAGACACTTCAGGTA
TATTTCCCGACCATTTTCTTTTTATTCCTAAATGTACGCCTGAAATAAAT
ACTCTATTTCTTGATGAACTTTTTTTTAAGAAGGATATTGTTTGATGACA
TAAAAAAAAGAGTCAAAGATTGACCGAATATACCTACATGATGCATGAGA
CTTATGTTTGACTAAAGTCCGAATCATGATACAAATAAAACCCAGCTCTA
ATGTTGATCGAGCAAAATAGCAACTTTAGTGTTTTTCTTATCAAATTGCA
GTGATATTAAATTGTTTCCTTAACATACATGTATGTAAGTATATCCTTCT
GTGTAAGTCAATATAATGTACACATTAAGGAGGATTCAAATTTACATCTG
CATCTTGCAAAAAACACAAATTCCCTGACGTTAGTTACTTTAATAATTAG
TTTCATTTGTTTATATATATTTCAAGAAGAATGAAAATAGATCCTCCCCC
CCCCCCCCCCCTTCACCTACTGTATTCTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTATGTGATCT
TTATTTTTAGAAATAAAGAAATAAAAAAAGGTCCGACTATTGTATCATTA
TACGCATGTATTACATAAAGAGTCCTGTACAAGTACAATTGTATCAACAT
ATTATTTCATTATCTTTTCATAATTAATTTATATTTTTAACTTTCTTATT
TTCAACTTCATAATATGAAGTGTTATTTCATATTTGTCTCGGTATATTGT
AATAATTAATTTCATGCAAGCACTAATAATGATTTGGTATAGGATGTAAC
TGTGCCAAAGATAATATAAATGAAGACGCAGCAGGGCAATTTAATTTATA
CCAAAAAATTGATATGGAGAAGTTAACCACTCTTAATGAGGTGACAGAAG
ACTCAGGAAAAAGTGTTTTTCGTTCATGGGAAGATCGATTAAAGAGAGAT
CAAGTAAGGACATTGACACTTATTATATTATTAATAAGTCATTTGAATGC
CCTTTTCTTAATTTAATCTTAGTTTGTTGAGTCGGATGCTGATGAAGAAT
TACTGTTTAATGTACCTTTTAGTGGAATTGTTAAATTAAAAGGAATTGTT
GTCATCGGTGGAGAGGAAGGACGTAATCCTAGTAGAATTAGATTGTAAAT
CGAACTCATTATATACGTGTGTATATATGACTATTTAAACCATAATTTCC
CATATTTTTTAGGTTTAAAAATAGGCCTTTTATGACTTTCGAGGATGCTG
AAGGTAAATCCGATCAGGAGTTTGAGTTAGCCTTTGATCAGGATGGAAGT
TTGACCTACCCTACAAAGTATGTAATCATGCTTCCATTTCATAATTTTTT
AATTATAATTAATTATTTATACATGAATTGTTTTCTTTGTATTTTGTAGG
GCTGTAACGTTTTCTTCAGTTGAACATTTATCCATACATTTTCCTTCAAA
TCAAGGAAATAGGGACTCCTCAAAGATTTTTTACATTGGTTTAAAAGGAG
ACTTTATTAAATCAAATCGTGTGGGTGTCGTGACTGCTGTCTACGAATCC
AGACCCATGCTGGAAGACCATAAAACAGACCTTAAAAATGAAGCAACTAA
CCAACTCAATTTTTAGGAGATAATTTCTAATCGAATGTTTTGATTTTTTT
TAAAGCAAATAAAAAGTAAAAATATTTGATTTCCGTTTCCAATAATTATT
ATTATCGTAAAGTAGGAC

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