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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 78..99 |
| None | No IPR available | COILS | Coil | Coil | coord: 872..893 |
| None | No IPR available | COILS | Coil | Coil | coord: 118..153 |
| None | No IPR available | COILS | Coil | Coil | coord: 339..360 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 560..705
e-value: 2.4E-11
score: 42.7 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 362..521
e-value: 1.0E-54
score: 183.9 |
| None | No IPR available | PANTHER | PTHR18934 | ATP-DEPENDENT RNA HELICASE | coord: 62..1009 |
| IPR007502 | Helicase-associated domain | SMART | SM00847 | HA2 | coord: 755..846
e-value: 3.5E-34
score: 129.5 |
| IPR007502 | Helicase-associated domain | PFAM | PF04408 | HA2 | coord: 756..845
e-value: 1.7E-25
score: 88.8 |
| IPR001650 | Helicase, C-terminal | SMART | SM00490 | HELICc | coord: 597..694
e-value: 1.9E-16
score: 70.6 |
| IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 606..693
e-value: 6.5E-12
score: 45.0 |
| IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 562..735
score: 16.235 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | SMART | SM00487 | DEXDc | coord: 361..546
e-value: 2.0E-35
score: 133.7 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 373..537
score: 21.11 |
| IPR011709 | Domain of unknown function DUF1605 | PFAM | PF07717 | OB_NTP_bind | coord: 880..980
e-value: 1.5E-30
score: 105.2 |
| IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | PFAM | PF00270 | DEAD | coord: 370..522
e-value: 1.1E-5
score: 24.8 |
| IPR010400 | PITH domain | GENE3D | 2.60.120.470 | | coord: 1014..1190
e-value: 3.1E-47
score: 160.0 |
| IPR010400 | PITH domain | PFAM | PF06201 | PITH | coord: 1020..1165
e-value: 1.2E-40
score: 138.6 |
| IPR010400 | PITH domain | PROSITE | PS51532 | PITH | coord: 1009..1182
score: 57.908 |
| IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | PROSITE | PS00690 | DEAH_ATP_HELICASE | coord: 479..488 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 354..887 |
| IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 1014..1165 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000842 ID=EMLSAP00000000842|Name=EMLSAP00000000842|organism=Lepeophtheirus salmonis|type=polypeptide|length=1202bp
MTSPLNWIRDELHRVSGISDVSIAEFFLDLSAKSLSETDLEDRIQKTETL
DVGDPLVLEFVRGLWSRIPRSGPSEGVKRRMEARAMEAAARAEKSKNEAY
QLLSDEDEEIPKKRKKKKKKASKDVQEKEDDIDKMEREREEDLKERDAFA
KRMLAKDKEKTRKVTEKSDSRAYAEAAKRLEIEASDKDKMVPELRKESRR
AYLAKRKVDKLVELEDDVQDDEFLFEKEILTEKEIKERDYKKTILALSKE
HDKAAEVEKVHRYHMPDGSKNELDSYVEVDEKEKAPHYEQRKWEEEHMNN
ARFSFGAKDAKKKYEKKYEYILDDEIEFVQTFKMPGTKKDEKESELNETQ
KKRMSIEETKKSLPVYPFRKSLIEAINEHQVLIIEGETGSGKTTQIPQYL
YEAGFTKDGKKIGCTQPRRVAAMSVSSRVAEEIGIKLGNEVGYSIRFEDC
TSERTVLKYMTDGMLLREFLSEPDLSSYSVMIIDEAHERTLHTDILFGLI
KDISRFRSDLKLLISSATLDAEKFSEFFDDAPIFRIPGRRFPVDIYYTKA
PEADYIDACVVTVLQIHVTQPLGDVLVFLTGQEEIETCQEILVERTRKLG
SKIKELLIVPIYANLPSDLQAKVFEPTPKGARKVILATNIAETSLTIDNI
IYVIDPGFNKQNSYNARTGMESLIINPVSKASANQRAGRAGRVAPGKCFR
LYTAWAYQHELDDNAVPEIQRVNLGNVVLLLKSLGINDLIHFDFLDPPPH
ETLVLALEQLYALGALNHMGELTKLGRRMAEFPCDPMMSKMIIASEKYKC
SNEILTIAAMLSNNSSIFYRPKDKIIHADTARKNFFVNGGDHLTLMNVYN
QWRDTDYSTQWCYENYIQYRSMRRARDIRDQLEGLLERVEIDIISNPNEV
QSICKSVTAGYFYHTSRLSKGGNYKTVKHNQSVMIHPNSAMFEDLPRWVI
YHELVFTTKEYMRNVIEIKNEWLLEVAPHYYKAKELDDSTTKKMPKTAGK
ARCNCAKDNINEDAAGQFNLYQKIDMEKLTTLNEVTEDSGKSVFRSWEDR
LKRDQFVESDADEELLFNVPFSGIVKLKGIVVIGGEEGRNPSRIRLFKNR
PFMTFEDAEGKSDQEFELAFDQDGSLTYPTKAVTFSSVEHLSIHFPSNQG
NRDSSKIFYIGLKGDFIKSNRVGVVTAVYESRPMLEDHKTDLKNEATNQL
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