EMLSAT00000000859, EMLSAT00000000859-696706 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000859
Unique Name	EMLSAT00000000859-696706
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1148	supercontig	LSalAtl2s1148:39650..44909 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000859 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000859	EMLSAG00000000859-683625	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000003763	EMLSAE00000003763-712691	Lepeophtheirus salmonis	exon
EMLSAE00000003764	EMLSAE00000003764-712692	Lepeophtheirus salmonis	exon
EMLSAE00000003765	EMLSAE00000003765-712693	Lepeophtheirus salmonis	exon
EMLSAE00000003766	EMLSAE00000003766-712694	Lepeophtheirus salmonis	exon
EMLSAE00000003767	EMLSAE00000003767-712695	Lepeophtheirus salmonis	exon
EMLSAE00000003768	EMLSAE00000003768-712696	Lepeophtheirus salmonis	exon
EMLSAE00000003769	EMLSAE00000003769-712697	Lepeophtheirus salmonis	exon
EMLSAE00000003770	EMLSAE00000003770-712698	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770311	auto770311	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000859	EMLSAP00000000859	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1148:39650..44909+

protein sequence of EMLSAP00000000859

>EMLSAP00000000859 ID=EMLSAP00000000859|Name=EMLSAP00000000859|organism=Lepeophtheirus salmonis|type=polypeptide|length=452bp
MMNSEHEMCQNCKRDIPVHNYRMHTIQCAGSVTTCPDCGDPVSKDLFDAH
HQQFHSPRECPLCGISVQAVKLYSHKKNDCPKRNVCCKYCQIQKIASEMM
DHETRCGSVSKSCPECASLVPLKDLEAHKLHHKNKEEMYKLTERTHGYSR
ETRSSKEYKSQTLPRTSNISNLSSDANTLLPCEFCEEMVPMFKLLEHQXX
XXXXXXXXXXXXXXXXXXXXSMYTTGTSSSSNNSNINKRYGTDNTEVVLR
RKLNSSNRYDSYDSRKDSSIDDNEEYLPCEFCGQSFLPDYIMKHQMSCDQ
NPHPSKFPSRRASSYLSPSSSINREGRACTEDRQLRPLGGSLSRQGSFTT
SSRQRRGESLTRQSSFSRNYLSQRSSYDYXSPSASSIRRASIFDGYSGFA
IYSSISQGLDEITYGGRRXRRNSITESSYTRTSDNSFALPTLLAMQXNSL
CF

mRNA from alignment at LSalAtl2s1148:39650..44909+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000859-696706 ID=EMLSAT00000000859-696706|Name=EMLSAT00000000859|organism=Lepeophtheirus salmonis|type=mRNA|length=5260bp|location=Sequence derived from alignment at LSalAtl2s1148:39650..44909+ (Lepeophtheirus salmonis)
TATTAGTTCATTTTAGACCACGAATGTTCAAAATAGTAAATTAGTAGAGC
TTGTACATACATAGAGTCTCTACAGCAACACTCCAATCAAGAGCCTGAAA
CCTCAAAAGCAACACATATATATACCCTGGATCCAACGCCTCAGTATCAA
AGGAATCCCACATATCACATATATATTCTATACAGAATCTTCCTTTTGTG
GTTGTTTTCATCCGAGGGGAGTTACTTTATGATGTAACTATTTTGAAACC
TGTAGACCCTATGTAGAACTCAGACTCAGAGCTATTGTACACCTGAAAAA
AATCCCCCTTCCCTCCAAACAGTGTCATAGTTTTTTTGAAGGAACCTCGA
CTTTTATAGCTTATTGGAGTGAATAATATCCTTTTATACATATGTGAGTA
TATGTGATCTATTACTATATTTTGTTATATATTCAAAATAATCAAGATAA
AGAAGGGAAGAGTAGTCAAACGACAACAAGAAAAGTTATGAACAACTCAT
GCAAAAAGCCGGCTTTTCTTTTTCTTTTCCTTTCGTTTTTGTTCCTCAGT
TCATTTCCCTACTTTTTAATTTTTTTTTTCTTTCTTTTGAAAGTAGCAAG
TTCATTTGATTTATAATTAATAAATAATAAATCGTCGGTCAATTCGATGA
GGTTGACAACCTTTAACTCTTTTGTTTCCTCTCTCTCTCTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTTAT
ATGATATATACTTCATAAATTATGATTACCTTTCCCAACTTTTTATGAAA
TATTTCTATATTTAATGAAAAATATATTTTACATGTTCTAATTTTTTTTT
TTAAAGAAGTAGATGTAAAAAAAGTCACGCAACCTATTTAAGATCCCTAT
ATAAATAAAATGTACCTCAAAGATACTTGGTTATTCAATAAATTTATCAT
GGAAATCTCTAAAAGGACAGTCACATCTTGTTATCATAGTTACATTTCTT
TCTTTTCTATGCCGCTCGTTGAATGAGGGGAAAAAACTGGTGGTGGGATA
GGAACTTTGCCAATTATAAAAAAAGTGACGTTGGATTATTAAGAGAAATT
TATTTTTAGAATGACAGAAATTATTGCATTGCAAACTCCATGTAAACAGA
GAGAAATAATAATTTATAGTCCTACATATTTTTTCATAAGGATACAAGTT
CATTAGTTAATATTTCCTTTTCAGACATCCTAGAACCTTTGTCTTAGCAG
CAGCTTTATTTGAAGTCTTATAAACCAACGGATTGAATGATGAATAGCGA
ACATGAAATGTGTCAAAATTGGTAAGTAGGTAATATCCACTGTAAAGCAT
TAACAGCCGTCCCATACCCTGCGGCCCTGAACTCCACTCAAACAAACAAT
CAAAACATCCACACTCTCTTCCTTTAACTACCTTGGAGGGAGTAAAATGA
TACTCATAGTGTAGTGCTAATGACGTCATGCAGTGTGCAAAAAAAAACTT
TAATTTGTTTGCAGTCAAAGGTAGCTCTTTTAAAATCAACTATTAAGAGA
TGTCTAATTAAACAAAGCACATCTGGGGTTCCTTTCATTCGATTGGATTA
TAATTTACATATCCATTCACTGTCCAGAACGAGGAAAGAAAGCTTCTTCT
CCTTCTTCCTTGTATATTTATAAACAAAACAAAATATATTTTGTGTCTTT
TCTTCTATATTTATCAATNGAAGRGGGTTYTTTGAACCCTCTTCTCTGTC
CATGACCTTCGAATCAATAATAGCATTTACAGGGAGGGGGNCGAGTTGCA
TTTATCACATATATTGCGTAAGGCAATTTTGGCGCCTACCTTGTGAAATT
AGATATCAGCAGATTTACTTTAATATTATTTTATTATATTGTTGCTGACT
CACATGGACTTTATTGATTTTGTACATCATATTTACAGAGTATATTGTAT
ATCAATGCAACAAAGTTGCTATTATTTTGTGGACAGGGTCGTGCACTACA
GCTAGAACAAGTTTGACCTCATCCAGATCCTAAGCAAATGCTATGTGACG
AATTTTTTGGTTGAATTAAATAGCACATGTTTCTAATTCTAATGGCATAA
TAATTTTCAATATGACTTGCATGGGCATCAATTCTCTGACGAAGTAATCA
TTTTACTTTATACAAAAAAAAATATTAATCTTGTATAAATTGTCTCAGAG
TTTGTCACTTTGGTTTTAGAGACAAATTATGGTTTCAACATAGGTAGATC
TTTTGAATAAAAATATTTTTGATGAATTGCATTATCTGGCCTAGCTTTCG
ATTTGTTTCTGTGCTGCACTTTTTAAAGGAATAAACGATTATTTAACAAA
TTTCAAAACTGTCTTAGGCCACGACGTACCATTTTAAACAGTTAGTATTC
CTTACATTTAACTCTATTTCAACTCTTGCATATCAATATTCACATTTATA
AAGTAAGCATTTTACTTCATGAAGAAAAAGTTTAATCTTACCTAAATGGT
CTCAGAGTTGGTTCAAATTACTTGATCTGGGCCAACTGCATTACTTTGGA
ATTCTTGAATAACGGGGGATTAGATGGCATCATTTATAGACTTTAACACA
ACTAACACTGGAGTTATTTGCGTTGAATAAATTTGAAAATATCAAATTAG
CAAAATACTACATACTAAATGAGTGATCGTGTTTTTTCAAACTCTGACAA
CTGACTTAAAATAATAACAAACATAGTTTTTTATTAGTCGCATAACTTCT
TATATGAAGATGGAAAACTCGGCTGTGATATACTTATACGGTATCTGGAT
GAGATCAAAGTTTGTTCCAATGATATTGCACGTCTCTATATAACGAGTAT
TTCTTTTTTTATGAACAGTGAAGTTAATCAGTCTCAATCACTCATTATAA
AATAGTAAATGAGCTTATTCTAATTTATCGCCTCAATTGCTAATAAATTT
TCACTTGATGCACAAAAAAAAAAGAAAAACGACAAAAAACTGGACATACT
CACGTATAACATTAAATACTATAGAAAGATAAAAAAATCAAGCTATATAA
ATATGCATTAGCTAGTTGGATCCAAAAATTAATGTGTATCTCCTCTCTCT
TTTAGCAAACGAGATATCCCGGTCCATAATTACAGAATGCACACAATTCA
GTGTGCGGGCTCTGTTACCACATGTCCAGACTGTGGTGACCCTGTGAGCA
AGGATCTCTTCGATGCTCATCATCAACAGTTTCATTCCCCACGGGAATGT
CCCTTGTGTGGGATCTCCGTCCAAGCAGTCAAACTTTATAGCCACAAGGT
ACGTAGGGTGTAATGTCATTTTTTTTAAAAACAATGACTAACTTTCAGTG
CTCATATGAATATGTATTGTGGAAATGGATCACTTTGTACTTACATATCA
TGTTCAAGTGCATTTTGCATTTGACAAAGATGAATTATTTTTAACTCTTT
GAATGATGCAGATTTTAAAAATAGAGCATCATCATGACTCAACTCTCATG
GATACATCTTGAAAAGCATAAATTACAAAGAATTCATTTCACAATTTGAA
TAACACATGTTCTTTTTTATTAAATGATAACAAGTGGGGTAATTAAATGA
ATTTCTTTGAAGTTTTAGAATAAATTAAGCGTGCAAAAACTATTTGCCCA
TAAATTAACAATATTTCAAGCATATATTTGATTTTAATAAATACATTAAA
TGCTCTCTAATTTATCTACTCAAATCAAATTTTCATCTACAAAAAAATAA
ATCAGATATTAGAAAATATATTCGTTCTGAAAAATTTATGGGGAGTCATG
TTGATTAATTCTAATAATTCTTTATAATTAGAAAAATGATTGTCCAAAGA
GAAACGTTTGTTGTAAATACTGTCAGATTCAAAAGATCGCATCAGAAATG
ATGGATCATGAAACCCGTTGCGGAAGCGTTTCTAAATCATGTCCTGAATG
TGCCTCCCTCGTTCCTCTCAAAGACTTAGAGGCCCATAAGTTACATCACA
AGAATAAAGAAGGTTTGAAATTAATTCACAATTTATTTTTCATCAATCGT
TCCTTTCTATTTGTTGATAGAGATGTACAAATTGACTGAAAGAACTCACG
GATATTCGAGAGAGACGAGATCATCCAAGGAATACAAATGTAAGATCACT
TTTAATACTAATACTGTTAAACGTATTTGAAACATATATTTAAATACTAT
ATTAGCTCAAACACTACCACGAACATCAAATATCAGTAATTTATCATCAG
ATGCAAATACCTTACTTCCTTGTGAGTTTTGCGAAGAAATGGTCCCTATG
TTCAAGCTACTTGAACATCAGGTATCCCTCTCCATCTTTGCATTATTTAA
TGAAAACTAATCATTGTTACTATGCAGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATGT
ACACCACAGGAACCTCCTCCTCTTCCAACAATAGCAACATAAATAAAAGA
TATGGAACCGACAACACTGAGGTGGTTCTTAGAAGAAAGTTGAACTCATC
TAATCGATATGACTCCTATGATTCTCGGAAGGATTCCTCCATCGATGACA
ACGAAGAATATCTTCCCTGTGAATTTTGTGGACAGTCTTTCCTTCCAGAT
TATATCATGAAACATCAAGTAAGTTTTCAACTACTTTATTTCATGTTCTC
CGTCTCATAATGCTGTTGTAATATTATTTTTCATAGATGTCCTGCGATCA
GAATCCTCATCCCTCCAAATTTCCATCAAGAAGAGCAAGCAGCTATCTAA
GTCCTTCATCATCTATTAATCGAGAAGGTAGAGCTTGCACTGAGGATCGA
CAACTCCGTCCCTTAGGCGGGAGTTTGTCCCGCCAAGGTTCGTTCACTAC
TTCTAGTCGACAAAGGCGTGGAGAGAGTTTAACTCGTCAAAGCTCTTTTT
CAAGAAACTATTTGTCTCAAAGAAGTTCATATGATTACMCCTCCCCATCT
GCCTCATCAATTAGACGAGCTTCCATTTTTGATGGTTATTCAGGCTTTGC
TATTTATTCTAGTATTAGTCAAGGTTTGGATGAGATAACCTATGGCGGRC
GACGKAGKAGACGAAATTCTATAACAGAATCATCATATACGAGAACCAGC
GACAATAGTTTTGCACTACCGACTTTATTGGCTATGCAGGKAAATTCCCT
TTGTTTTTAA

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