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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1148 | supercontig | LSalAtl2s1148:39650..44909 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000859 >EMLSAP00000000859 ID=EMLSAP00000000859|Name=EMLSAP00000000859|organism=Lepeophtheirus salmonis|type=polypeptide|length=452bp
MMNSEHEMCQNCKRDIPVHNYRMHTIQCAGSVTTCPDCGDPVSKDLFDAH
HQQFHSPRECPLCGISVQAVKLYSHKKNDCPKRNVCCKYCQIQKIASEMM
DHETRCGSVSKSCPECASLVPLKDLEAHKLHHKNKEEMYKLTERTHGYSR
ETRSSKEYKSQTLPRTSNISNLSSDANTLLPCEFCEEMVPMFKLLEHQXX
XXXXXXXXXXXXXXXXXXXXSMYTTGTSSSSNNSNINKRYGTDNTEVVLR
RKLNSSNRYDSYDSRKDSSIDDNEEYLPCEFCGQSFLPDYIMKHQMSCDQ
NPHPSKFPSRRASSYLSPSSSINREGRACTEDRQLRPLGGSLSRQGSFTT
SSRQRRGESLTRQSSFSRNYLSQRSSYDYXSPSASSIRRASIFDGYSGFA
IYSSISQGLDEITYGGRRXRRNSITESSYTRTSDNSFALPTLLAMQXNSL
CF back to topmRNA from alignment at LSalAtl2s1148:39650..44909+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000859-696706 ID=EMLSAT00000000859-696706|Name=EMLSAT00000000859|organism=Lepeophtheirus salmonis|type=mRNA|length=5260bp|location=Sequence derived from alignment at LSalAtl2s1148:39650..44909+ (Lepeophtheirus salmonis)
TATTAGTTCATTTTAGACCACGAATGTTCAAAATAGTAAATTAGTAGAGC
TTGTACATACATAGAGTCTCTACAGCAACACTCCAATCAAGAGCCTGAAA
CCTCAAAAGCAACACATATATATACCCTGGATCCAACGCCTCAGTATCAA
AGGAATCCCACATATCACATATATATTCTATACAGAATCTTCCTTTTGTG
GTTGTTTTCATCCGAGGGGAGTTACTTTATGATGTAACTATTTTGAAACC
TGTAGACCCTATGTAGAACTCAGACTCAGAGCTATTGTACACCTGAAAAA
AATCCCCCTTCCCTCCAAACAGTGTCATAGTTTTTTTGAAGGAACCTCGA
CTTTTATAGCTTATTGGAGTGAATAATATCCTTTTATACATATGTGAGTA
TATGTGATCTATTACTATATTTTGTTATATATTCAAAATAATCAAGATAA
AGAAGGGAAGAGTAGTCAAACGACAACAAGAAAAGTTATGAACAACTCAT
GCAAAAAGCCGGCTTTTCTTTTTCTTTTCCTTTCGTTTTTGTTCCTCAGT
TCATTTCCCTACTTTTTAATTTTTTTTTTCTTTCTTTTGAAAGTAGCAAG
TTCATTTGATTTATAATTAATAAATAATAAATCGTCGGTCAATTCGATGA
GGTTGACAACCTTTAACTCTTTTGTTTCCTCTCTCTCTCTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTTAT
ATGATATATACTTCATAAATTATGATTACCTTTCCCAACTTTTTATGAAA
TATTTCTATATTTAATGAAAAATATATTTTACATGTTCTAATTTTTTTTT
TTAAAGAAGTAGATGTAAAAAAAGTCACGCAACCTATTTAAGATCCCTAT
ATAAATAAAATGTACCTCAAAGATACTTGGTTATTCAATAAATTTATCAT
GGAAATCTCTAAAAGGACAGTCACATCTTGTTATCATAGTTACATTTCTT
TCTTTTCTATGCCGCTCGTTGAATGAGGGGAAAAAACTGGTGGTGGGATA
GGAACTTTGCCAATTATAAAAAAAGTGACGTTGGATTATTAAGAGAAATT
TATTTTTAGAATGACAGAAATTATTGCATTGCAAACTCCATGTAAACAGA
GAGAAATAATAATTTATAGTCCTACATATTTTTTCATAAGGATACAAGTT
CATTAGTTAATATTTCCTTTTCAGACATCCTAGAACCTTTGTCTTAGCAG
CAGCTTTATTTGAAGTCTTATAAACCAACGGATTGAATGATGAATAGCGA
ACATGAAATGTGTCAAAATTGGTAAGTAGGTAATATCCACTGTAAAGCAT
TAACAGCCGTCCCATACCCTGCGGCCCTGAACTCCACTCAAACAAACAAT
CAAAACATCCACACTCTCTTCCTTTAACTACCTTGGAGGGAGTAAAATGA
TACTCATAGTGTAGTGCTAATGACGTCATGCAGTGTGCAAAAAAAAACTT
TAATTTGTTTGCAGTCAAAGGTAGCTCTTTTAAAATCAACTATTAAGAGA
TGTCTAATTAAACAAAGCACATCTGGGGTTCCTTTCATTCGATTGGATTA
TAATTTACATATCCATTCACTGTCCAGAACGAGGAAAGAAAGCTTCTTCT
CCTTCTTCCTTGTATATTTATAAACAAAACAAAATATATTTTGTGTCTTT
TCTTCTATATTTATCAATNGAAGRGGGTTYTTTGAACCCTCTTCTCTGTC
CATGACCTTCGAATCAATAATAGCATTTACAGGGAGGGGGNCGAGTTGCA
TTTATCACATATATTGCGTAAGGCAATTTTGGCGCCTACCTTGTGAAATT
AGATATCAGCAGATTTACTTTAATATTATTTTATTATATTGTTGCTGACT
CACATGGACTTTATTGATTTTGTACATCATATTTACAGAGTATATTGTAT
ATCAATGCAACAAAGTTGCTATTATTTTGTGGACAGGGTCGTGCACTACA
GCTAGAACAAGTTTGACCTCATCCAGATCCTAAGCAAATGCTATGTGACG
AATTTTTTGGTTGAATTAAATAGCACATGTTTCTAATTCTAATGGCATAA
TAATTTTCAATATGACTTGCATGGGCATCAATTCTCTGACGAAGTAATCA
TTTTACTTTATACAAAAAAAAATATTAATCTTGTATAAATTGTCTCAGAG
TTTGTCACTTTGGTTTTAGAGACAAATTATGGTTTCAACATAGGTAGATC
TTTTGAATAAAAATATTTTTGATGAATTGCATTATCTGGCCTAGCTTTCG
ATTTGTTTCTGTGCTGCACTTTTTAAAGGAATAAACGATTATTTAACAAA
TTTCAAAACTGTCTTAGGCCACGACGTACCATTTTAAACAGTTAGTATTC
CTTACATTTAACTCTATTTCAACTCTTGCATATCAATATTCACATTTATA
AAGTAAGCATTTTACTTCATGAAGAAAAAGTTTAATCTTACCTAAATGGT
CTCAGAGTTGGTTCAAATTACTTGATCTGGGCCAACTGCATTACTTTGGA
ATTCTTGAATAACGGGGGATTAGATGGCATCATTTATAGACTTTAACACA
ACTAACACTGGAGTTATTTGCGTTGAATAAATTTGAAAATATCAAATTAG
CAAAATACTACATACTAAATGAGTGATCGTGTTTTTTCAAACTCTGACAA
CTGACTTAAAATAATAACAAACATAGTTTTTTATTAGTCGCATAACTTCT
TATATGAAGATGGAAAACTCGGCTGTGATATACTTATACGGTATCTGGAT
GAGATCAAAGTTTGTTCCAATGATATTGCACGTCTCTATATAACGAGTAT
TTCTTTTTTTATGAACAGTGAAGTTAATCAGTCTCAATCACTCATTATAA
AATAGTAAATGAGCTTATTCTAATTTATCGCCTCAATTGCTAATAAATTT
TCACTTGATGCACAAAAAAAAAAGAAAAACGACAAAAAACTGGACATACT
CACGTATAACATTAAATACTATAGAAAGATAAAAAAATCAAGCTATATAA
ATATGCATTAGCTAGTTGGATCCAAAAATTAATGTGTATCTCCTCTCTCT
TTTAGCAAACGAGATATCCCGGTCCATAATTACAGAATGCACACAATTCA
GTGTGCGGGCTCTGTTACCACATGTCCAGACTGTGGTGACCCTGTGAGCA
AGGATCTCTTCGATGCTCATCATCAACAGTTTCATTCCCCACGGGAATGT
CCCTTGTGTGGGATCTCCGTCCAAGCAGTCAAACTTTATAGCCACAAGGT
ACGTAGGGTGTAATGTCATTTTTTTTAAAAACAATGACTAACTTTCAGTG
CTCATATGAATATGTATTGTGGAAATGGATCACTTTGTACTTACATATCA
TGTTCAAGTGCATTTTGCATTTGACAAAGATGAATTATTTTTAACTCTTT
GAATGATGCAGATTTTAAAAATAGAGCATCATCATGACTCAACTCTCATG
GATACATCTTGAAAAGCATAAATTACAAAGAATTCATTTCACAATTTGAA
TAACACATGTTCTTTTTTATTAAATGATAACAAGTGGGGTAATTAAATGA
ATTTCTTTGAAGTTTTAGAATAAATTAAGCGTGCAAAAACTATTTGCCCA
TAAATTAACAATATTTCAAGCATATATTTGATTTTAATAAATACATTAAA
TGCTCTCTAATTTATCTACTCAAATCAAATTTTCATCTACAAAAAAATAA
ATCAGATATTAGAAAATATATTCGTTCTGAAAAATTTATGGGGAGTCATG
TTGATTAATTCTAATAATTCTTTATAATTAGAAAAATGATTGTCCAAAGA
GAAACGTTTGTTGTAAATACTGTCAGATTCAAAAGATCGCATCAGAAATG
ATGGATCATGAAACCCGTTGCGGAAGCGTTTCTAAATCATGTCCTGAATG
TGCCTCCCTCGTTCCTCTCAAAGACTTAGAGGCCCATAAGTTACATCACA
AGAATAAAGAAGGTTTGAAATTAATTCACAATTTATTTTTCATCAATCGT
TCCTTTCTATTTGTTGATAGAGATGTACAAATTGACTGAAAGAACTCACG
GATATTCGAGAGAGACGAGATCATCCAAGGAATACAAATGTAAGATCACT
TTTAATACTAATACTGTTAAACGTATTTGAAACATATATTTAAATACTAT
ATTAGCTCAAACACTACCACGAACATCAAATATCAGTAATTTATCATCAG
ATGCAAATACCTTACTTCCTTGTGAGTTTTGCGAAGAAATGGTCCCTATG
TTCAAGCTACTTGAACATCAGGTATCCCTCTCCATCTTTGCATTATTTAA
TGAAAACTAATCATTGTTACTATGCAGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATGT
ACACCACAGGAACCTCCTCCTCTTCCAACAATAGCAACATAAATAAAAGA
TATGGAACCGACAACACTGAGGTGGTTCTTAGAAGAAAGTTGAACTCATC
TAATCGATATGACTCCTATGATTCTCGGAAGGATTCCTCCATCGATGACA
ACGAAGAATATCTTCCCTGTGAATTTTGTGGACAGTCTTTCCTTCCAGAT
TATATCATGAAACATCAAGTAAGTTTTCAACTACTTTATTTCATGTTCTC
CGTCTCATAATGCTGTTGTAATATTATTTTTCATAGATGTCCTGCGATCA
GAATCCTCATCCCTCCAAATTTCCATCAAGAAGAGCAAGCAGCTATCTAA
GTCCTTCATCATCTATTAATCGAGAAGGTAGAGCTTGCACTGAGGATCGA
CAACTCCGTCCCTTAGGCGGGAGTTTGTCCCGCCAAGGTTCGTTCACTAC
TTCTAGTCGACAAAGGCGTGGAGAGAGTTTAACTCGTCAAAGCTCTTTTT
CAAGAAACTATTTGTCTCAAAGAAGTTCATATGATTACMCCTCCCCATCT
GCCTCATCAATTAGACGAGCTTCCATTTTTGATGGTTATTCAGGCTTTGC
TATTTATTCTAGTATTAGTCAAGGTTTGGATGAGATAACCTATGGCGGRC
GACGKAGKAGACGAAATTCTATAACAGAATCATCATATACGAGAACCAGC
GACAATAGTTTTGCACTACCGACTTTATTGGCTATGCAGGKAAATTCCCT
TTGTTTTTAA back to top
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