EMLSAT00000000881, EMLSAT00000000881-696728 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000881
Unique NameEMLSAT00000000881-696728
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1152supercontigLSalAtl2s1152:81564..83118 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000881 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000881EMLSAG00000000881-683647Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000003848EMLSAE00000003848-712776Lepeophtheirus salmonisexon
EMLSAE00000003849EMLSAE00000003849-712777Lepeophtheirus salmonisexon
EMLSAE00000003850EMLSAE00000003850-712778Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771632auto771632Lepeophtheirus salmonispolypeptide
EMLSAP00000000881EMLSAP00000000881Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000881

>EMLSAP00000000881 ID=EMLSAP00000000881|Name=EMLSAP00000000881|organism=Lepeophtheirus salmonis|type=polypeptide|length=67bp
MDSGRILSFILFGSPLNLSDIQAAYLTNILQIVKYYVIILVPCNFAGNIY
TTINFSNRFIRFTMSAH
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mRNA from alignment at LSalAtl2s1152:81564..83118-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000881-696728 ID=EMLSAT00000000881-696728|Name=EMLSAT00000000881|organism=Lepeophtheirus salmonis|type=mRNA|length=1555bp|location=Sequence derived from alignment at LSalAtl2s1152:81564..83118- (Lepeophtheirus salmonis)
ATGGATTCAGGACGTATCCTATCATTTATTCTTTTCGGCAGTCCTTTGAA
CCTTTCTGACATGTTGCTGGCTCGATCAAAATAGTCCCTTTCAGTTTTTC
CAGCTTAACTAAACAAAGATATCTTTAAGTTAAATTAAAATAAATGAGTG
TTTTCTCGTCGTATAGGATTTTTTCTTTGCTTTTCTCAAGTTTGAAGAGG
CTATAGTTCTTATTTTCAAAAATAGAACATCAGTTTCTCCCCCAATCAAC
TTGTGCTTGACCGCTTACATCTACAAACAGTATCTTCTTTTGTAATAAAA
TTTCATTACAGACAAGCTGCTTATCTCACAAACATTCTTCAAATTGTCAA
ATACTATGTCATTATTTTGGTTCCATGTAATTTTGCCGGGAACATTTACA
CCACCATTAATTTTTCCAACAGGTAATTTTACGTCTGGGATATTTTGCAT
TATGACATATTCGCTGCCTCTTTATGTTTCTATGTAATCGGTTCGAACTT
TACTGTTTCTTGATCAAATTAATTATATAGCTAGAAGAAAAAGATAAACG
GAAAATGATTAAGAAATAATTAATAAAGTAGGAACAGTCAATTAATTTTA
ATTTCTATCTGGAGGAGTACAAGCTCCAATCACGCAACCTGTTGTTGTAA
AAAACACCATTTTTGATGATCAATTTATGTTGATCATATGAACTTTGTAT
AGTTATAAAGCTATAATATTTGTAGTAGTTAAAATTTTATAATATCATGT
TGTATTTTAAGCAACTCTTCTATTTTGGGGTAATACTTGAAATCTCCAAA
AAACGATGGAGGGAATGTATACCATTCAAGTTATGCGGCAAAATTTATTC
AATCAAAAATTATCAGTGGCAAAAATGTAAGTGGCAAATATTGCCGGCAG
AGAAAATGACCACGGCAAAACTATTTGTCACGCGTTATTTTTTGGGGTCC
TCTAATTTAATCGTTTTCTGGAATTTCCTTGTTGTATTTGTATGCATTTT
TCTTTCCTTTTTGTTATTAATTTATCCGTGTACTTTCAAAAAATAAAGGA
GTTATTTTTATATAATGTTCAAAACCGAAATATTGGTAGAGTGTCTCCAC
GTTACATTTACACTACATTTTTTTACATACCAAACTTGCTTATAAATTAC
AACTCGATTCAAAAAAAGATACATGAACAATTTAAATATTCTCTTTGAAT
CAAGAAACATGTATCTACAAACTATATTTTATAGTCTTTTCATTTATTTT
GAAACATTTCAACGACGTTTAAAGGTTTATCTTTAACAAAATAATCCATA
AAGTAATCGGATTAATTTACATAGTTTTGAAAATTACTTCGAGTATACAA
TTTAATAATAATAAAATTTAAGGTAGTTGAAATTGGTATCAAAATCAGAA
AGCTAATATACTTTGCGAAGAAAAAGAAAGGAAAAATAATCGATAATCAT
TTGTAGCTTTCTAATATGGTTTTTCTCGTTAGTTGTGCGAATATATTGTT
ATATGTTTTTTTATAATTTTCTAGATTTATAAGATTTACAATGTCAGCTC
ATTAA
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