EMLSAT00000000957, EMLSAT00000000957-696804 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000957
Unique NameEMLSAT00000000957-696804
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1166supercontigLSalAtl2s1166:81172..83346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000957 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000957EMLSAG00000000957-683723Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004234EMLSAE00000004234-713162Lepeophtheirus salmonisexon
EMLSAE00000004235EMLSAE00000004235-713163Lepeophtheirus salmonisexon
EMLSAE00000004236EMLSAE00000004236-713164Lepeophtheirus salmonisexon
EMLSAE00000004237EMLSAE00000004237-713165Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771630auto771630Lepeophtheirus salmonispolypeptide
EMLSAP00000000957EMLSAP00000000957Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000957

>EMLSAP00000000957 ID=EMLSAP00000000957|Name=EMLSAP00000000957|organism=Lepeophtheirus salmonis|type=polypeptide|length=562bp
MDEIPLPPNEPSYSPSHVTSSPEAPSANMGTTPPSGEKVVPVLGKEKAKK
RLLAFSKGISFGLKSRNNRIQSSKDNPVVENDEDENESELCFSSTTNNFS
SSSLNSSSVKKLNIDSIMEEEKELAANRPNLSYIPARSASSHVMSAVPQL
IVPVLPPNALIPQIPPSSFEKLRKDLIIXSMTDTLGNTLIIIPDGAIGMG
LQVFEPDFPKFKRRLDRDHGRLSCVESRKRTNLNIVKSGDEFIWKEYVRD
PVASDNELAFRGLSPKIVQNYSMEAIQDLLWSLDSEYHYKEFPKDANKKI
KGRYSVTFCYNPRFYQTKYETRSDILQDEEEQSRFEHILESLFKKKEEEM
NNSKFISGSFVSKEIPRVEQRQWYKKIENFMIEKETIFPEVLKARQKEGF
VPSKQVIKATVSKYKISMEVKVXXXXKSKDNNIPLSSVFEKMDTDLRKES
FDDGGXTNEEEQEDFPENLDELLSSKKSQSSKSSKKKKRKKDYEDDDEED
ELLNNEDLLNESDKVLINEENEKKEPSSHSKKSKKHKSEIKSDHEKRTDS
KKKKRRRNVKSL
back to top

mRNA from alignment at LSalAtl2s1166:81172..83346-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000957-696804 ID=EMLSAT00000000957-696804|Name=EMLSAT00000000957|organism=Lepeophtheirus salmonis|type=mRNA|length=2175bp|location=Sequence derived from alignment at LSalAtl2s1166:81172..83346- (Lepeophtheirus salmonis)
ATGGATGAGATTCCTCTTCCGCCGAATGAGCCGTCTTACTCTCCAAGTCA
TGTGACAAGTTCTCCAGAGGCTCCCAGCGCCAACATGGGTACGACTCCTC
CTTCGGGGGAGAAAGTAGTGCCCGTTCTTGGGAAGGAAAAGGCGAAGAAG
CGRCTTCTGGCGTTTAGCAAGGGGATTTCCTTTGGACTCAAATCACGGAA
CAACAGGATCCAAAGCTCGAAAGACAACCCCGTTGTGGAAAATGATGAGG
ATGAGAATGAGTCCGAGTTGTGTTGTAAGTTGTTGTGATTCGAATGATCC
TCTCTAATGAATGTTTATTTCTGATTCTAGTCTCCTCCACAACAAATAAC
TTCTCTTCCTCGTCTCTCAACTCCTCCTCCGTCAAGAAGCTCAACATTGA
CAGCATCATGGAAGAAGAGAAAGAATTAGCTGCTAATCGGCCCAATCTCT
CCTATATCCCAGCCAGATCAGCCTCATCTCATGTCATGTCCGCAGTTCCC
CAGCTCATTGTTCCTGTACTTCCACCCAATGCCCTTATTCCCCAGATTCC
TCCCTCATCCTTTGAAAAACTGAGAAAAGATCTGATCATCGMTTCGATGA
CAGACACTCTAGGAAACACTCTGATCATCATYCCCGACGGAGCCATAGGT
CCTCCTCTCATAAATATGCGGATATTGAGGAGATTCCCTCAGATTGGAAA
GCGTTCAAAGGCATGGGTCTTCAAGTCTTTGAGCCAGACTTTCCTAAATT
TAAACGTCGTTTAGATCGTGATCATGGAAGACTCTCTTGCGTTGAGAGTA
GGAAAAGAACGAATCTTAATATTGTTAAAAGTGGAGACGAGTTTATTTGG
AAAGAATATGTCAGAGACCCTGTTGCAAGTGATAACGAACTAGCATTTCG
AGGATTAAGTCCTAAAATAGTTCAGAACTACAGTATGGAAGCTATTCAGG
ATCTTCTTTGGAGCTTAGATTCCGAATACCACTACAAAGAATTCCCTAAA
GACGCTAACAAAAAAATAAAAGGGAGATATTCAGTGACATTTTGCTATAA
CCCTCGTTTCTATCAGACCAAATATGAGACCCGAAGTGACATTCTACAAG
ATGAAGAAGAACAGTCTAGATTTGAACATATACTTGAATCCTTGTTTAAA
AAAAAAGAAGAAGAGATGAATAATTCTAAATTCATATCGGGTTCGTTTGT
AAGCAAAGAAATCCCTCGAGTCGAGCAGCGACAATGGTACAAGAAAATAG
AGAACTTTATGATTGAAAAAGAAACTATTTTTCCAGAGGTTTTGAAGGCT
CGCCAAAAGGAAGGATTTGTACCAAGCAAGCAAGTTATTAAAGCGACTGT
GTCAAAGTATAAAATATCTATGGAAGTTAAAGTTAWASRAGMACAMAAAT
CTAAAGACAATAACATACCGCTATCATCCGTGTTTGAAAAGATGGACACG
GATCTGAGAAAGGAATCATTTGATGATGGTGGTRAGACAAGTCATCACAA
AAAACATAAAAAGTTGAAAAAAAAGAAAAGGTTAAAAATAATTATATTAC
AGATGAGGAAGAACAGGAGGATTTTCCTGAGAATTTGGATGAACTTTTAT
CATCGAAGAAAAGTCAATCCTCAAAATCATCTAAAAAGAAGAAGAGGAAG
AAGGACTATGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGAGACAAGTCATCA
CAAAAAACATAAAAAAGTTGTAAAAAAAAAGAAAAGGTTAAAAATAATTA
TATTACAGATGAGGAAGAACAGGAGGATTTTCCTGAGAATTTGGATGAAC
TTTTATCATCGAAGAAAAGTCAATCCTCAAAATCATCTAAAAAGAAGAAG
AGGAAGAAGGACTATGAGGATGATGATGAAGAAGATGAATTGCTCAATAA
TGAAGATTTACTAAATGAAAGTGATAAAGTACTCATCAATGAAGAAAACG
AGAAAAAAGAGCCTTCTTCCCATTCTAAAAAATCTAAAAAGCACAAAAGT
GAAATCAAATCCGATCACGAAAAACGAACCGACTCCAAAAAGAAAAAAAG
AAGAAGAAACGTAAAAAGTCTATGA
back to top
Add to Basket