EMLSAT00000000967, EMLSAT00000000967-696814 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000967
Unique NameEMLSAT00000000967-696814
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1094829..1096607 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000967 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000967EMLSAG00000000967-683733Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004279EMLSAE00000004279-713207Lepeophtheirus salmonisexon
EMLSAE00000004280EMLSAE00000004280-713208Lepeophtheirus salmonisexon
EMLSAE00000004281EMLSAE00000004281-713209Lepeophtheirus salmonisexon
EMLSAE00000004282EMLSAE00000004282-713210Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780405auto780405Lepeophtheirus salmonispolypeptide
EMLSAP00000000967EMLSAP00000000967Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000967

>EMLSAP00000000967 ID=EMLSAP00000000967|Name=EMLSAP00000000967|organism=Lepeophtheirus salmonis|type=polypeptide|length=119bp
MIPSWSPLFYVHVLIEGEKTDDDSCQGGVDPLVNNSSSSINLVSNILSTS
GGQIIAVQNPALFIRNQGRESSSPVSSIIPSPNNTSIHSISTRDSPPKRR
RKSSKSSPKFFVEYRFVFK
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mRNA from alignment at LSalAtl2s116:1094829..1096607+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000967-696814 ID=EMLSAT00000000967-696814|Name=EMLSAT00000000967|organism=Lepeophtheirus salmonis|type=mRNA|length=1779bp|location=Sequence derived from alignment at LSalAtl2s116:1094829..1096607+ (Lepeophtheirus salmonis)
ATGATTCCCTCATGGTCCCCATTATTTTATGTTCATGTCCTCATGTATAG GAAAAATAGAAGCGAAGAATAATAAAATTAGAGCCACTCAACCAATCAAC TCTTTTATGTGATGTGTAGTTACTATAGAGACTCTAAGGAAAGAGGAGAC AAGCCACGGCGGMACATCACTCAAAACAAAAATAGACTCTTCATTTTGTT ATCAGCTGMCGTATTTCTGATCATTTATCCTATTCTGTGTTCTGAACAAC CTTGATTGGTTGAATTAGAATTAGTTATTGTTCAGCTGCGAACAATTTCC AATAATCATTCTACGATAGTTCCATGGTTAGGACCGTTTTTTCTGAAAAG AAAGGTTGTGTGATATAATGAAGGTAAAGACGTGAAGCCGGCTGAAGTAA TAATAAAACAGAAAAGTATGTATGTAAATTAGGTTCACTTATTCACACAC CCTTGATCATAAAATGATTAGGAATGGGGTTTTATAGAGTATAAAACTTT TATGTTTATCTACAAAAAATAACTTCCCTTAAAATGACGTGATTCAAAAG ATGAACATAGTGCACTCAGACAATTTTAAACCTCTATGAATTAAAGGTAA TAATTTCCCCCCTCCCCTTTTATGTTTGTCACCTCTTTCTTTAGAGCAGG GATCGGATAACTTTTTTTAGCATTGTCCTAAAAGAATTTAGCCCAATCTA GGGCAGGGGCGTCGTCAGTATTATATATATTTTTTTTTTTGGGMYGGGGG YGGGTGGAATTTTCTTAGAAAACCATAGCATAATTTGATCGAATGTCCCT TTTTTTTTTTAATCTCTCAATCCCCCCCCCCTCCCCCTTCGGACGCCCCT GTAGTGGTATGAAGTTTATTTCATTACAGTAGTAAGTAAAATTCCTTTTT CATGGGATGGAAATAACATCTACTACCATTACCCCAAAAAAATTTCAATA TTAAATTTTCTGCAAAATAAATACCTTAATTCGGAAGGGGCCTACAGCCC CTCCATCCCYCCCCTTGTGGACGCCCATTAGTTATGTACCATTAGTAAAA TATTCTTTCAAAATCRCTAGTACCCCTTTGAGTGCCTCCCTATTTGTGAA CCACTGATCTAAATATTAACCATTTTATATTTATTTTTTATAGCTTCAAT TCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNCGCCATTCTGGAAACTCAAGTGAAGGAGAAAAAACGGACGACG ATAGTTGTCAAGGAGGAGTAGATCCCCTTGTCAATAATAGTTCCTCATCC ATTAATCTAGTTAGTAATGTATGTCTCATATTCTTTTCACTTAAAAATGT CTTAAATTGATGTATAGTTATCAAAAATTTTGTATTACAGATTTTGTCCA CAAGCGGAGGTCAAATTATAGCAGTTCAAAATCCAGCTCTATTCATTCGA AATCAAGGACGAGAAAGCTCCTCTCCCGTCTCTTCCATTATTCCATCTCC AAACAACACTTCTATTCATTCCATCTCTACTCGAGACTCTCCGCCCAAAC GTCGACGAAAGAGCTCTAAATCTTCTCCAAGTAGCGTCTCSAGMAGCAGC AGMTGCAATGGACTTAATCTTAGGGAAAGCCTATAAAGAGGCCTCCTCTT CCAATACCCCGTGCATGTTGTGATTATTTTTTTTTTTTTTTAAGAATTCT TTGTAGAGTATCGATTTGTATTTAAATGA
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