EMLSAT00000000979, EMLSAT00000000979-696826 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000979
Unique NameEMLSAT00000000979-696826
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1677984..1678607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000979 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000979EMLSAG00000000979-683745Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004339EMLSAE00000004339-713267Lepeophtheirus salmonisexon
EMLSAE00000004340EMLSAE00000004340-713268Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780843auto780843Lepeophtheirus salmonispolypeptide
EMLSAP00000000979EMLSAP00000000979Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000979

>EMLSAP00000000979 ID=EMLSAP00000000979|Name=EMLSAP00000000979|organism=Lepeophtheirus salmonis|type=polypeptide|length=95bp
MDSLALRKSFSDEELRNNLDDRFRVPSFSISLHEVSAKVIEAHEILHNKL
VRKLRKAVTGHPDKKVSDSLHEESVRKKVKKIDAMSFSLGVLHVS
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mRNA from alignment at LSalAtl2s116:1677984..1678607-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000979-696826 ID=EMLSAT00000000979-696826|Name=EMLSAT00000000979|organism=Lepeophtheirus salmonis|type=mRNA|length=624bp|location=Sequence derived from alignment at LSalAtl2s116:1677984..1678607- (Lepeophtheirus salmonis)
ATGGATTCCCTCGCTCTTCGGAAGTCTTTTTCTGATGAAGAGCTAAGAAA
TAATCTCGATGACCGCTTCCGTGTACCATCTTTTTCCATTTCTCTACATG
AAGTATCTGCTAAGGTGATTGAAGCTCATGAGATCCTGCATAATAAATTA
GTGAGGAAGCTACGAAAAGCAGTGACAGGGCACCCAGATAAGAAAGTGAG
TGACTCTCTTCACGAAGAAAGTGTGAGGAAAAAAGTTAAGAAGATTGATG
CTATGAGTTTTTCACTGGGAGTAAGCTTATGTTTTTTTGTGGAGTTGGTA
TTTTTCTCGTATCCCAGATGGTTTCCAAGCCTTTATGTTCTACTCATTTC
TTCTTTGTTGGTTCTTAGGTATGTTCGTAGGTACATTTATAATTAAGTTT
TGAGCTTATTCATATTTAGTGGGGGTTTTTTTTACCAATTTATGTATGCG
TTTCTTAAAATAATGAAGTACACTCTGAAATTTTCCAGTTGTTATTTTAA
CAACTGCACAGAGTAACATTTTATAAGAATGTGACTACATAATATATTTT
GAAGGAAAATTAAATACTTTTTTCAATTAAAATAAGTATTTCTCTATTTT
TTTCAGGTTCTTCACGTATCGTAA
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