EMLSAT00000001037, EMLSAT00000001037-696884 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001037
Unique NameEMLSAT00000001037-696884
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1171supercontigLSalAtl2s1171:93755..95025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001037 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001037EMLSAG00000001037-683803Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004602EMLSAE00000004602-713530Lepeophtheirus salmonisexon
EMLSAE00000004603EMLSAE00000004603-713531Lepeophtheirus salmonisexon
EMLSAE00000004604EMLSAE00000004604-713532Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771947auto771947Lepeophtheirus salmonispolypeptide
EMLSAP00000001037EMLSAP00000001037Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001037

>EMLSAP00000001037 ID=EMLSAP00000001037|Name=EMLSAP00000001037|organism=Lepeophtheirus salmonis|type=polypeptide|length=240bp
MKYVNLKCLGSHWKXIIFCFYNIGESLENLRNDTRNSDLHFLVYNSKGLE
SRILAHQFIFIPKSNLLRKLCYEVKGKHGISEPVVITLIGFKSIAVEALI
SYFYYGHTNLKLMDSFCDLCRTLGISNINKISLEYIPVHDNTDLVDPWGN
TKTPRHHSNTKIFTNYNLSEYDSIVLLNDKKIFCPPKVSLLKELVKRDSS
LKEDPFLSTENPGSNCPTLFKPHSLLQSHTNNYAKDKSDK
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mRNA from alignment at LSalAtl2s1171:93755..95025+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001037-696884 ID=EMLSAT00000001037-696884|Name=EMLSAT00000001037|organism=Lepeophtheirus salmonis|type=mRNA|length=1271bp|location=Sequence derived from alignment at LSalAtl2s1171:93755..95025+ (Lepeophtheirus salmonis)
ATGAAATATGTTAACCTGAAATGTCTTGGAAGTCACTGGAAGGKAATCAT
TTTTTGCTTCTACGTAATTTGCATAATTGAATTGCAACAAATACTGTTTA
TTAAATTGTATTTCCATTGCAGAATATTGGAGAAAGTTTGGAGAATCTTC
GAAATGATACAAGAAACTCTGACCTGCATTTTTTAGTCTATAATTCTAAG
GGATTAGAGAGTCGCATCTTAGCTCATCAGTTTATATTTATTCCCAAATC
TAATTTACTTCGYAAATTATGCTATGAAGTTAAAGGAAAACACGGAGTAA
CATTTCCATAAAGTGCTCCTATGTTGAGTTTATTTAAAATATTATTTTTA
TTATTTTCAGATATCTGAGCCAGTTGTAATTACACTTATCGGATTTAAAT
CCATTGCAGTTGAAGCTTTAATTTCGTACTTTTACTATGGTCATACTAAT
TTAAAACTCATGGATAGTTTTTGTGATCTATGCCGTACTCTTGGTATCTC
GAATATAAACAAAATCTCATTAGAGTATATTCCTGTACATGACAATACGG
ATTTGGTCGATCCTTGGGGTAATACAAAAACACCACGACATCATTCAAAC
ACTAAGATATTTACAAATTATAATCTATCCGAATATGATAGTATCGTATT
ATTGAATGATAAGAAAATATTTTGCCCTCCAAAAGTTTCATTGTTGAAAG
AATTGGTGAAAAGGGATTCTAGTTTAAAAGAAGATCCTTTCTTAAGTACT
GAAAATCCTGGCTCTAATTGCCCAACATTGTTCAAGCCTCATAGTTTACT
ACAATCTCATACAAATAATTACGCGAAGGATAAAAGTGACAAGTAACAAT
ACGTTTTATTTTGATTTAAATTTTTAGGTACTTACAATTTATTCGTGTAA
GTATATAACTTTTTTTTTAAACAGTGATCCTAAGTGCCTAAGCAAGAAAA
TGAAGTTGAGTTTTACTCAGAATATTAAAGGAAAGTTGTTCTTAGAACCA
AGTATAATTAAAGACAAAAAAACGATAACTATTAGTACAAATTGTGCTCC
AAGGAATTCTCCAAAAGTCAATTCTTACAAAAAAGATACCTTTTTTAAAA
AATAGTTCGGAAATATCACAATTTACTTGATCAACTCATCAATTATGATA
CATCCTCATAATAACTGTGAAATATAACTTAATCNAATCAATAACCTCAG
AAATCGTATTTTCAATTATTATTTCTTTTCCATTACCTAATCAAGATGTA
TGAGTAACTTTGTCTTCTAAT
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