EMLSAT00000001110, EMLSAT00000001110-696957 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001110
Unique NameEMLSAT00000001110-696957
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1186supercontigLSalAtl2s1186:115596..119698 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001110 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001110EMLSAG00000001110-683876Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004853EMLSAE00000004853-713781Lepeophtheirus salmonisexon
EMLSAE00000004854EMLSAE00000004854-713782Lepeophtheirus salmonisexon
EMLSAE00000004855EMLSAE00000004855-713783Lepeophtheirus salmonisexon
EMLSAE00000004856EMLSAE00000004856-713784Lepeophtheirus salmonisexon
EMLSAE00000004857EMLSAE00000004857-713785Lepeophtheirus salmonisexon
EMLSAE00000004858EMLSAE00000004858-713786Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772566auto772566Lepeophtheirus salmonispolypeptide
EMLSAP00000001110EMLSAP00000001110Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001110

>EMLSAP00000001110 ID=EMLSAP00000001110|Name=EMLSAP00000001110|organism=Lepeophtheirus salmonis|type=polypeptide|length=272bp
MGDAGHKHEKGWRGKNDSKESNEPGEEPVKKKRNDDERRSRRNREDKKHA
SDSKDDSSRKNYTEDSGHGERTRRHNRDENKNGSESKEEPSRKKNTDDES
DRSWRQSREDKKESSEGKEEVVSSKRYSDRRHDDRGRWGERSRNKYKDND
AGYSQPITVLQKDDFPAINSGSKDNENDSGGNTKSKNSKRSNTERIKNKE
RPAIQIYRPGMGKFSSQTIKSDSAKEDEGGKCDEPQDSGNKSSKSFKKYS
HKQYYAGGGARFRRTERKESND
back to top

mRNA from alignment at LSalAtl2s1186:115596..119698+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001110-696957 ID=EMLSAT00000001110-696957|Name=EMLSAT00000001110|organism=Lepeophtheirus salmonis|type=mRNA|length=4103bp|location=Sequence derived from alignment at LSalAtl2s1186:115596..119698+ (Lepeophtheirus salmonis)
CCTGCGCCAAGTTGGCAAATTTGTTCATTTTATAAATCATGAGTGTGGGT TATTTTATCTATTAATTTATAATCTCGCTTTGATGATATGTAAAATAAAT TTAATGAATAATTTGGTAACTTGACCCTATCTTCCCTAATTCCAAATCTA GTAGGTGAAGATGATGAATTTGGCCGCAAGTGCCTCAATGACGTCATATT TCATTTCTTTGAGTTACAAATATTGGCTAATAATTGTAATAACTAAATAT CATTACAAATCATTATTTTAATCATTAATTATTATCAATGACGAATTCCA ACAACCCTGAACCTAAGGAGGACGGACCAAGAACCAGATCCTCTAAAAAA CCATTTCCAACAAAAGTAATTCTCTTAAGATCTCCATTTTTTATGTGTGT CTTAATGTTTATATAATTAATATTAATTATTAGATCGTATGTCGACGATT GCCTCCAACGCTGGACAAAACCAACTTTTTGGATCTCGTAAGTCCTTTAC CCGAGTACAACTACTTCCGTTTCGAAAAGCCAAACAATGAGGATGGGAAT ATTTCCTTTTGTCGGGCGTATTTCAACTTTTTGAAGCAAGAGGATGTGTT TAATTTTACGGAAAGGTTTGATGGATATGTATTTCTGGATAAGCAAGGTG AGGAATGTCTCAAAGTCCTCCCTTATTTAAGACTCTAATAAATGATCATC CACAGGGAATGAATATCCAGCAATTGTGGAATTTGCTCCTTATCAAAAAG TGTCCAAAGTGAAAACAGATCAACGTCCAGACGCAAAGTGTAATACCCTT GACACGGATAAGGAGTATTTGGCCTTTGTTGAGGCATATGAAAACAAGGA AAATGAGAATATTGCGCATCCTACACCTGAACAATACTTGGAAGAAATTG AAAATCGTGAAAAAATTAGTGAGTCACTATTGATGGATGATTTTAGTCAT ATAGAGCGTATTCTTGTCAGCATTGTTGATGTCCACCAAATTGTATAACA ATGTAACCCATTTTTTCATTAATATTAAGGAAAATAGTGAACCATTGGAT GTTCAAATGGGAGCATCAAATAAAAGGCCTAAACCCCTTACTGTATATCA AAAATCTATCCCTCTGGTGCATAGTTTATATATATTAAAAATAATTGATT ACATCGTTATACAATCTTATTTCCGTATTTTAATAACAATTAATTACTAC AGTGAAAAAGATTAGATATTTTTCTCTAATAATCCTACTTTTTTCGTTCC TAATCGATCAAAAAATAATAATAATTTTACAAACTTGGAATTAATTTTTA GGATTATTAATTAAAATTTCAATGTTTATCGTGTGCATCAAGTAGTATTC AGTGCGGATGTTAAGTCTTTTTTATTCTTAAAACCATTTGATGAAGTTTC ATCACAATGTATAAAAATTTTTAGCTAGCATTTTATAAGCCATTTTGATC ATTATTCAACAACTAGGTATAATTAATAATTCATTAGAACTTACATTATA GTTGTTCGGATAAATTGGGTAATGTGTTAATTATTTATAACCTTTGATTT TGTCACTTATTTTATTATTCATTTATTAATTTAGAAGAAACAAGCACTCC ACTTTTGGAATTCTTAGCTCTAAAGAAAATTAATAAAAAGGGGAAATTTA GGGAAAAGAAATCTCGTCGTCAAAGAATGGGAGATGCTGGACATAAGCAT GAAAAGGGATGGCGAGGCAAAAATGATTCAAAGGAATCCAATGAGCCAGG AGAAGAACCCGTGAAAAAGAAGCGTAATGATGATGAAAGAAGGAGTCGAC GAAATAGAGAAGATAAAAAACATGCTTCAGATTCCAAAGATGACTCATCA AGAAAAAATTACACGGAGGACTCTGGACATGGTGAAAGAACTAGACGCCA TAATAGAGATGAGAATAAGAATGGATCAGAGTCGAAGGAAGAGCCTTCTA GAAAAAAAAATACTGATGATGAATCAGATAGAAGTTGGCGTCAGTCTAGA GAGGATAAAAAAGAATCCTCTGAAGGAAAGGAAGAAGTAGTGTCATCTAA GCGATACTCAGATCGACGGCATGACGATAGAGGTCGTTGGGGTGAGAGAT CAAGGAACAAGTACAAGGATAATGACGCAGGTTTGGTATTACTGCTCAAT TTAGGTTTTTGATTGAATGGAATTCGTATTTGATTTCTTAGGTTACTCTC AACCCATAACCGTACTTCAAAAAGATGATTTCCCAGCCATAAATTCAGGA TCCAAAGATAATGAGAACGATAGTGGTGGAAATACTAAGTCCAAGAATTC AAAAAGAAGTAACACAGAGAGAATAAAAAACAAAGAGCGACCTGCAATAC AAATTTATAGACCCGGTATGGGGAAATTCAGTTCTCAAACCATCAAGTCA GACTCTGCGAAAGAAGATGAAGGTGGGAAATGTGACGAGCCCCAGGATTC AGGGAATAAGAGCTCAAAGTCTTTTAAGAAATATTCTCATAAACAATATT ACGCAGGTGGTGGGGCACGTTTTCGTCGTACCGAGAGAAAAGAGAGCAAT GATTAACAACAATGGTCTTATTTTTAAAGATCTGGTTTTCGAAGTTTGTA TCTTTTCTTAATGTGTGTCTCATTTATAAGTAGAGGAAAATGATTTGACG TGTTACGTTATGATTGATACGTTGATATTTTTCTCGGGTCTGGAGGATTC TTGTAAATTAGGAGTTTAGTTTGCRTCAAAAGAAATCATTTTAACTGTCT TAGGTTAAACATGCCTTACTAATTTGATGTACGACATTTCCAAGAGGATC TTTTAACTTGTATTACAGTGCGTCAACCTTATATATATATTTTGTAAATA TACCCAACACATGTTTGTATTACATCATATATCCAAAATATTTAATAAAT GTATTAAAAATGATAATCATTTGATGAATTTGTATTTTGTTTCTATAAAT AAATATTATGTGTCACTTCTCCAAAGCTTAATGGTTTTGTCATTTTCGAG TGCAGCGGACGCTATAATATTCTCAGTTGGGTGACAAGCGGTACTTAAAA CGACATCAGTGTGTCCTTGCAATTTTTGGACAATTTCTTTAGTTTGTAAA TTCCAAATATAAACCATATTGTCCTCTGAGCCTGATACAATCCACTTTCC ACCCGTGACACTAAAATTTGCGAAAACACAATACTTTTCATTTCGATGCC CAGAATAGGTTTTAAGACATTTTCCTTTGGAATATTCCCACAATTTAAGG GTATTGTCCAATGTTGCTGCTAATATATATTTTCCATTGGGACTGAATTT TACAAAAGAAACAGGGGGATTGTCGTTGTCGATCAGAGTCTTGAGACATT GACCTGATGCTGTATCCCAAATTCTGCAMAAGCCATCATATGAAGAGGAA ACAATGAGAGATCCGTCTCGATTAAAATGAACTGCAGAGACCGGGTCTGA GTGAGCTGGAAGTGTTTTCAAGCATTTACCGGTACGCACATCCCAAATAC GAACACTCTCGTCGAAGGAGCCAGAGACCACCAAATTACTTTGGGGATTA AAGTTACAACAAAATACATAATTGGAGTGACCTGAAAACAAACAAACAAA CGTGAATGAATACACTGAGATAGTGAATTGCTTTTTCTCTCTCAATTTGG GATTCGAACCTTTTAAGGTCTTGAGGCATTTCCCTGAGGAAAGTTCCCAG ATTTTTAATGTTTTATCATCAGATGCAGACACAAGGAGTCGAGAGTCAGA GCTCCAAGCTACGTCCGAAATTCCCAGTTTATGACCGGATATTGTCTTTT CAAATTTTCCGTCATAGGAGCCCCAAACTTTGATCAATTTATCCGCCGAA GAAGAGGCCAACCATTCGCCATTCGGACTGAATTTCACGGCTGAGACACC CTTGGTGTGACCTGCCAAAGTAAACTTTAAACTGTAGTTGGGTCGTAGTC CGGATTTGCTGCTGCCTCCTTGAGAAGAAGAAGAGTGATCCATTTCCTTT CCAAAGGCCTTCACTACTCACACTTATCTTAATTAATAATTACTCCAATT TTCCGCCACTCAAAATAACACGATTTTCATATTATAACGAAAGAAAAAGA AGA
back to top
Add to Basket