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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1186 | supercontig | LSalAtl2s1186:160345..169896 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001113 >EMLSAP00000001113 ID=EMLSAP00000001113|Name=EMLSAP00000001113|organism=Lepeophtheirus salmonis|type=polypeptide|length=564bp
MYIIRQIAQGIGGQSPWQSSALRTILPRGLMTNESILYVFFLLIISAAVE
TRGSGFRCGTGNHLACTPRNYSKFDLPVKKGVNHITVSIDIAEVLRINDK
DYSITFSGYFNVKWQESRIELSPDFGEEVAGPGVNTTNNPNIVVPMSTEF
VKDVWMPDIFIYSLKTYKVMDVLNKLAGLWIGADKTILYSQATHITFICP
MRFDKFPLDTQVCKFQVGSCSYDDTKMRFMTENAGYQSPKTANSIALDYD
IQIKMLSKEDQVFLGGGLGNFSLAGFELVLHRYVSTYIITYYLPSGLFVI
VSWISFLIPMDVIPGRMALLVTLFLVLVNIFNTVTTNTPKAEGLTAIEAW
MLACILFVFGALIEYXAILFKKQRHVSAQHKLNIRVVCKDNLKYEVHEQR
PPPTRDVKGTHTETLVGLFVIVSWISFLIPMDVIPGRMGLLVMLFLVLVN
IFNTVTTNTPKAEGLTAIEAWMLACILFVFGALIEYAAILFKKQRYVSAQ
NKLNIRIVWKDNLKYEVYEQRPPPSTLSLQHLAEEYWRIDKFFLISFPIL
FFIFNIIYWLSFVM back to topmRNA from alignment at LSalAtl2s1186:160345..169896+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001113-696960 ID=EMLSAT00000001113-696960|Name=EMLSAT00000001113|organism=Lepeophtheirus salmonis|type=mRNA|length=9552bp|location=Sequence derived from alignment at LSalAtl2s1186:160345..169896+ (Lepeophtheirus salmonis)
GATATACAGAAATCCACAGACTATTCAATGTAATCTACTAATCAAGTAAT
TTGAGCGAGTGTTGTTGCTTTGTGAATCACACATCCGAGTCCTTCTCTTT
CTTTCTTTTATTTCCTCTGCGGCATCTCTTCAATAATAGTACTACTACAA
CATACATATACTTAATACGACTGCTTCTTAGTTGCTATTGAAGCAAATAC
GACAACACGAAATATTCATAGCACGGGTGAGGACATACTAGCATACCGGT
CCGATTCTACAACACTCTGCGGTACTCTGGATTCAGAAGAGGATCCACGT
TAAAGAGAGAATGATCAGAAAGAAAAAAAACAATTATTTGTCGTCAAAAT
GAGTTGTTTTTATTAGGGAAAAAGAAAATAACTAATTAAATTTCGTCATT
GGCATCATCCTTCAGTTCATTATTATCCTCGTGTCCTACTCAACTCCTCC
TCCCGGTGGCGACACAAACCTTAGAGTCAACTAATACTTCTACTTCTACG
AGTACAAACACATACAGCTCATACTTTGTAAAGTGTGGTTCAGTGATTTG
ACAATTTTTCCTTTCATATTTTCTTTTTGACAAAAAAGTAAAGGAATTCT
TTATTTTTTACATACATACCTCCCCAATATAATTTGAAATATTAAAAGGA
GCTAAGGGTCATAAAATAGGCTTATAACACAATCCAATCATAAGGACTCA
CGTCTTCTTCCTACCAGCTTACTAAATGAGAGAGAATGGCTTTTTGCACA
CAGTCTATCTTTTATATTTAAAAATGAGATAAAGGTCTATGTGTAATATT
ATTATTATATTTAAAGAACTTGTTTAAAACAAGCCTATCAGACAAATTTA
TTTGTGCATTTATACAAAATGGCCCACATCTGTCACACACTTATTTATTT
ATGGCCCTAAATATAATAATGGAAGTAGTAAGGAGGAAGCTGGTTCCTAT
AAAAAGGTCCAAATGAAAGAAGGGAGAATGAGTGAGGTAGATACAGGGGC
ATAGAGAGAGAGAGAGAGAAATGGGAATGGAAAGAAACACAAACTACAAT
TTTTGATCTTTCCTTTTCTTATTTCTTTTTATAATAATAAATTGTTAATA
AATAAATAGTGACCGATTTCTTTTTCTATACATACAACATATATTGTAGT
TTCTTATTACAATAAATGTTATATATACATATATATATTCTTAGTCCATT
GCCTCTCTCTCAATTTCTCTGCTTCTTTGATGATGATAAGAAGAGTAGTT
GATTCTTCTCTTCTTTTATATTATACTTATGGTTGGATTATTTTTAAAGT
CCTTTTTACTCATGAGTAGGATGTTGATGATAGGGATTATTCATTAATCA
ATTTGGAGCATCAATTGATTCTTTCAACACCAACCCATCAAAGTGTCCAT
TTTGTCTAAATAAATAAATAGGCCGATAATGGTTTTTCCTTGCCTTTTCT
GTACCTTTTCTACCTAAATATATAGCATACAATCATTTTCTCTTTCCTTC
CCTCTTCTTGTAGTATATATGTTCTTCTTCTTCTTCTTATTATTATTGAA
AAAAGCCTTTTGTCAATTGGATTTTTACAAATTTTTTCATGTATTTTTTC
TGTCTTTCATCATGTTCTTTACCTCCTTTAAAGCTCTCTCTCTCCTCTTG
TATTCTTTCTTCCTTGTCTCTTCCTATATATATATATATATATATGTATA
CATACTAAAAAGAGAGTATATTATTAAGTGTATAAGNCCTATAAAAATGA
CATGAAAAAAATCTAAGCCATTCATTCAGAGAAAGAGCGGGAGGGCCTAC
TTTTTAGTTCTAGACAATGTTTTTGTTTTTACAACTCTGAGACACACTTT
TCAAAATATGTAATTAAATATACATTAATAATAACTATTACATACGTAAT
TAGTAATCTCATGTTTTAATTCCATAGCAAACAATTCAGAAAACGAATGA
AGGCCAGAGCAGAAAAGAAACGGAGAATGAATCTGATGAGCAGCACTTTC
TTCCTGTACGATTTCTTCACGCCGTCGTCAATTACACAGATTAACTCCTG
CTGATAAATAATACACACCTACATAATTCATTCAATATGTACATAATTCG
ACAAATTGCTCAAGGGATTGGAGGGCAAAGCCCTTGGCAATCCTCTGCCC
TACGAACCATACTGCCTCGAGGACTCATGACAAATGAAAGTATTCTCTAT
GTATTTTTTTTGTTAATAATTTCCGCAGCAGTAGAGACTCGAGGAAGTGG
ATTTCGATGTGGAACTGGAAATCATTTAGCTTGCACTCCTCGAAACTACT
CCAAGTTTGATCTTCCCGTTAAAAAGGGAGTGAATCACATCACTGTTTCC
ATAGATATTGCAGAAGTATTAAGAATAAATGATAAGGACTACAGTATTAC
TTTCTCGGGCTATTTTAATGTTAAATGGCAAGAAAGTCGAATTGAACTGA
GTCCAGACTTTGGAGAAGAAGTAGCTGGCCCAGGTGTCAACACCACGAAT
AATCCGAACATTGTTGTTCCCATGAGTACTGAATTTGTCAAGGATGTTTG
GATGCCGGATATATTTATTTATAGCTTAAAGACATATAAAGTGATGGATG
TTCTCAATAAACTTGCAGGACTCTGGATTGGTGCAGACAAAACCATACTT
TACTCTCAAGCAACTCACATTACCTTCATTTGCCCAATGAGATTTGATAA
ATTCCCTCTAGATACTCAAGTGTGTAAATTTCAAGTTGGTTCTTGCTCCT
ACGATGATACAAAAATGCGATTCATGACAGAGAATGCAGGCTACCAGAGC
CCCAAGACTGCCAACTCGATTGCTCTGGATTACGATATTCAAATCAAAAT
GTTATCTAAAGAGGATCAAGTATTCCTTGGTGGTGGCCTAGGGAACTTTT
CCTTGGCTGGATTCGAACTGGTGCTTCATAGATATGTTTCTACATATATC
ATTACTTATTATTTACCTAGGTGAGATAATAATTAATTAATTATTCATCT
TGCTTTCTGTACGAAAGTTAGTAGACCTACCTTACCTAACTATTGTTCAT
ATTTTCTCCCTGTTATTCATGCAGCGGATTATTCGTTATTGTGAGCTGGA
TCAGTTTTTTGATACCAATGGATGTAATCCCTGGAAGAATGGCTCTTTTG
GTCACTCTTTTTCTTGTCTTGGTGAATATTTTCAATACAGTAACCACGAA
TACTCCTAAAGCTGAGGGTCTCACTGCTATTGAGGCCTGGATGCTTGCCT
GCATTCTCTTCGTATTTGGAGCCTTAATAGAGTAAGTCCTCATTATTTAT
AATACTTTAGAAAGAGAAAGCTGTCTTTAATTTAATCCATGTCCTTTTTA
TCTGTCCTTTTTCTTTCCAGATATSCCGCCATACTTTTTAAAAAGCAACG
CCATGTCTCGGCTCAACATAAATTGAATATCCGGGTTGTCTGTAAAGACA
ATCTCAAGTATGAAGTGCATGAACAACGTCCTCCTCCGACTCGTGTGAGT
TTACAGNCAACTTGCAGAAGAATATTGGAGAATCGATAAATTCTTCCTCA
TTTCTTTCCCTATACTCTTCTTTATCTTCAACATCATTTATTGGTTGGCT
TTTATCATGTAATGCAGTCATTACACAACCAAACCACTCATAGTTACTCA
CACTCTTGTCAAAGAAAGAAAAAAGATGGACACATAAGGACAAAAAAAAA
TCATCTTCATTATTGTTGTACACTTTTTGTTGTTTTTGTATAAAAAAAAA
GTATCTGTGAAAAAAAAAATCAAACAAACAAATCAAAAAAACAAAAAACC
AAAAAAAAAACCAAACATAACTGTTTTTTTTTTATTTTAATTAATTTATT
TCAAAAAGTATATCTGATGTATCATTCGTTATTAAACTAACTAATCATTA
GCAAATGTTGCCATGAAAGAAGTCAATTTTTTCTAATTATCTTTGCTAAA
GAAACTTTATGACCGGCATATGACATTTATGGTAGGMCATAATATATTAA
ATATTCTAAATCATAAGCGCTTATATCAAAGATACTTTAGTGTGCTGATA
AATGTAATTGTATTTGTTGTTAATTGTTATTTATTAAATATAATTTTTTT
TTCATGAAAGGATGTAAAAGGAACACACACAGAAACATTGGTGTAAAAAA
AAAACTGGCTAATAACCAATCATTTGAGACTACTTGGAGAGAGACATTCA
TTCATATTTTATATCTTTTTAGGCCAATAACTTTTTTTTATTCAATTCAA
ATTGGTGAACCCATACGCCACCTACTACTAACTTAAATAATAATAAACTA
CTTAATTAATTATTATATATAAATAATTTTTTTTACTCAGAATGTTAAGC
TTTAAAAAACTAAATAAAAAATTATACAAATACCAAWAAGTTACAAACCA
TTAGGAGCAAACTACGTTTTTTTTTTTTTTTTTGATAAATCAGAGCCTCC
ATAGACGATGATGAATCCCTATAACTACCTAAATACGACTAATAACAACA
GCAAGGTTCCAATCCATGGTGCAAATAAATCTTTTTTTTTTGTTTTCTTG
AAAAGCAAGTTGAGACTTCTCTTAAATTATTTTTTTAAATATTATTTGTT
TGTTTGTTTCTAATTAATTTCATCATCATTTCATTTGACACCCACTATAG
TAAATATTTCCCCATTCTTGAATAAGAGCTGGCCCTTATTCATTCCAACC
CAAAGTAGAGAAACCATTAATAGTTAATTATCCATAACTAAGTAATTAAG
TATACCTCACTATTTTTTGGTTATATTGTTTGCTTTAAGTTTTTTTAACC
ATCATTTATTGTTATTTTCAGGGGCGTCCGCAGGATAATATATATATCTC
TGTTTTGGGAGAAAGGACTTGTTTTTTGGAATTTTTTTGAAAAAAAAATT
GCAAAAATTAAACTCTCGAAAAAAAATTCAAAAGTCTATTATGCTCTTCA
CAAAAAATTAAATTTCAAATAATAAATTTTGTTAGAAAAATTTCAAAAAT
CTATAGCAATTCCCAGAAAATTAAATTTTTTAGAAAAAAAAAAAAATATT
TTTAATTATTAATTCAAAAAAACAAAACAAATTTTATAGTTATTTACATA
AAACAAAACTTTTTGGACAGAAATTTCCAAAATTAAAGTTAAAATATTAC
AATTTTTTGGAAAAAAAATTCGAAAATCTACAGCTTTTCACAAAAAAATT
AAATTTCAAATATAACATTTTTCCGAAAAAAGTTCCTAAAATCCATAGCT
ATTGACAAAAAATTAAATTTTAGGAAATAAATTTCTAGTATCAATCAAAA
ATTTCTTAATTTTTTTTGGGGAGGGGCTACCTACATCCTTTCCATCCCAA
CAACACCCTTGGACGCTTCTGATTTTTTATCTCCTTAATTAATTAAATAT
TATTATTATTATTATTTATCAACTTGTTAAAGCAAAAAAAAAAAAAATCA
AATCAAAATCTTATTAGTAATATCGAGAAAAAAAAATGTGAAAATTTATG
TCCATACTAATAATATATAAATATAGCTAATTTGGCTATGCATGATGTAT
AGAAACAAAATACTCGGTCTATTGTTTTATTTACTACACACTTCCTAAGA
TGATGCCTTTTTTCATAAAAAATATATATATTTAAAAGGAAGGCTATGAG
TTTCCATAGATTGGTTTTCATTATATCAATGTAAGGTTAAGGGTACAAGT
ACATATTTTTCAAAAAAAAAACACACAATTTTTTGTTATATCTGTGGATT
TTTGAATTGTTTTCGAAAAAATATTAATATTTCAAATTAAAACTTTAAAA
TTTTTTGTTAATAAATGTGGATTTTGAATTTTTTTATAAATAGCCTAGGA
TTTTTGATATTTTTTTTCCAAAAATAAAATTTTTTGTGGATGGTTGTGGA
TTTTTATTTAAAAAATATGTGGATTTTGTTTTTTTCCATCAAAATTTAAT
TTTTCATAAACAACCAGTGGAAAAATTTAATATTTGATTTTTTTTTCCAA
AAATTAAAATTTTTGTGGATAGGMGTGGATTGAAAAAAATATATATATTT
CAAATTCATTTTTGGAATGTTTTCCCCAAAATTTTATTATTAAAAATTTA
ATTTTTGCAATTTTTTCCAAATAATTTAAAATTTAATTTTTGGAATTTTT
TCCAAATAATTTAAAATTTAATTTTTGAAATTTTTTTCCATAATTATTTT
GCGAATAACTGTAGATTTTAAATTTTTTTCTCAATAGTTTGATTTTTATG
AATAACCATGGTAAAAATTTAATATTTGAACTTTTTTTTCCAAAAATTAT
AACTTTTGTGGATAAGTGTGGATTTAAAAACAAAATTATATTTCAAATTW
ATWTTTGAAATTTTTTSCCCAAAAATGTTATATTAAAAGTTTAATTTCCA
AAGAATTTCCATATCTATGTGAATAGCTATGGATTTTTGATTTATTTTTA
TACGTTTTTTTTCGATTTCTTTTCTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCATATCTATGTGAATAGCTATGGA
TTTTTGATTTATTTTTATACGTTTTTTTCGATTTCTTTTCTAAAAAATTC
CGACAACCAATCTCCTTTTTTGAGCTCCCTTCATAATTTTACAATACATC
AGATATCTTCTTTATATAACATATATTATGCATATTTATGAAGGAGAAAG
AGTTATTTTAAGAATTCCAGAATGAATCAAAATGAGGTCTTTGGTAGTAT
ACACCTTTCTCCTTCCTATCTAGCCCACTGTTTTTAAAGCCATGAGTAAA
AGTAGGAATGAAAACGACATGAAAGTGTACCTTCTAACCATTTCTCTCTC
CCCCTCTCTCTTGAAATAATAGGAGAGAGATTCATTTAATACTTATAGGG
AGAGAGAGAGAGAGANGAGAGAGAGAGAGAGGCAAAACACTTTTCATGAC
TTCTCGTTCATGGATCAAAATCTTCTTCCCTTAGATTMTACACTCTTTCT
TCTTCTTCTCCTCCTTCAATGCGTGGAACCATTATTGTTTTGCCAGGATA
AATTCATGGGCTGTTTACTCTTCACTCTCTAAGTATGTAATTTAGTGTCT
TCAGCCATTTGAACGAATAATCAACCTCTACATACTTCCATGAACATCAA
CTAAATATATTATCATATGTGATCTTCAATCATTACAAGTTACAAGTACC
AATCACCATTCCAAATGAAGGATGTCCTGCGACGTCAAAACTACTCTCTT
TATCAGAGTGTGAATCTTCCTTCTGTTTCATTGACTCTTCAGTGGTGCTT
TTGTATTTTAGATTCATAGCATCATTCCCTGAGATTCATTCTGATATGCA
ACCATAACCATGTTGACTTTACAACAACAACAAAAAATAAAACAATTACT
CAACTTTCCCCTGCTACATTGCCATAAGTGGATGATGGTATCCTTTAGGT
GCGGAAATCCCAAGGCTCAAGCTCCTAAAAAGCGATCCAATTTAGAGCTT
ATACCTCTTTTCTTCCTTATCATTGTCGTGTCCTTACCAAAATTAGCAGA
GTCGAATGGATTTCGCTGTGGAACTGGGAATCATTTAGCGTGTATACCTC
GTAATTACTCAAAATTTGATCTTCCAATAAAGAAAGGAGTAAATCGAATC
ACGGTGTCCATCGATATTGCTGAAGTACTTCGAATAAATGATAAGGACTA
CAGTATTACTTTCTCAGGTTATTTTATTGCAAAATGGCAAGATAGACGCA
TACGATTAGGCCCAGATTTTGGTGAGGAACAAGCAGGATTGGGAATCAAT
ATCACAGAGAATCCAAATATCGCAGTTCCTGTCAATACTGAATTTATTAA
AGATATCTGGATGCCAGATATATTTATTTATAGTTTAAAGACATATAAAG
TGATGGATGTTCTTAATAAGCTTGCTGGTCTCTGGGTTGGTGCAGACAAA
ACCATACTTTACTCTCAAGCAACTCACATTACCTTTATTTGCCCAATGAG
ATTCGATAAATTTCCATTAGACAAGCAAGTATGCAAATTTCAAGTTGGTT
CTTGCTCCTACGATGACACCAAAATGCAATTTATGACTGAGAGWGCTGGT
TATNNNNNNTGACTGAGAGTGCTGGTTATCAAAGTCATAAAACTGCCAAT
TCAATAGCTTTAGATTATGACATTGCAATAAAACTTCTTTCAAAGGAGGA
TCAAGTGTTTTTTGATGGAGGCCTAGGAAACTTTTCCTTGGCGGGRTTCG
AACTTGTGCTTCATAGATATGTTTCTACCYATATCATTACTTATTATTTA
CCAAGGTGAGTGACATTGTTTAATGATTCGTTCTTCCCTTGAAGGAGTGA
CGAAACAAAATAATATATTTTTTTCTTTAAAGTGGTCTTTTCGTTATTGT
GAGTTGGATCAGCTTTTTGATTCCAATGGATGTTATCCCTGGTCGAATGG
GACTTCTTGTTATGTTATTTCTTGTCTTAGTTAATATTTTTAATACAGTG
ACAACAAACACTCCCAAAGCGGAAGGTCTTACTGCTATTGAGGCCTGGAT
GTTGGCATGTATACTCTTTGTCTTTGGAGCACTTATTGAGTAAGGATATT
CCTTGTCAACATATTAATTAAAACATGAAATATTATCACAACCCTAGGTA
TGCAGCTATACTCTTCAAAAAACAGCGCTACGTCTCTGCTCAAAATAAAT
TGAATATTCGCATTGTATGGAAAGACAATCTCAAGTATGAAGTATATGAA
CAACGTCCACCTCCGAGCACTCTTAGTCTTCAGCATCTTGCAGAAGAATA
TTGGAGAATTGATAAATTTTTCTTAATATCCTTTCCAATTTTATTTTTTA
TCTTTAATATCATTTATTGGCTCTCCTTTGTCATGTAGATTTTTGTTCCA
TTCTCATTGTCCTACGATTCTTTTTACCTGATACATCCTGGATCACTTTT
TGATTGATTCTTTCATGTTGAAAATGTTATGTAATGGATTCAACCTCTAG
TATATTTATTGTAACCTCATCTGACCCTTTTTACTGCAATTGATCTTTTA
TGTCGTGAATGCAGCATAACGCACAGACATACATATAGCCCATGTGAGGG
AAATTATACATAAAATATTCCACCTTAGCAATCAAATTCATTCTGTATAT
TGGAAAACACTTTGGAAAATTACAGTTTTATTGGTTCAAAAAATACAAAT
MCTCTATTTTGGTTCATTGASCTTCCGTAATACCATAGCCACCCCTGTGT
TCGTTTCCTTTCTTTCGAGAAATTAATTTATTACTCAGTCTTGTTTATAA
CATAATTATAATATTATCATCATTAATAGCCTGCCAAAAATTTGTTGTAC
ATAGACNATAGACTAATATAACAGTTCTCCCCCACCCCCCTTACATCGAC
TATTTTTGTCATACACAACCATAGAAGTCAATTTTAGTGTATTTTCATTC
TATTTAAAATATGTAAATCAAGATTTGAGTACATCCTTATCCTCACTTAT
TCATGACAGTACACTATTACGACGAGATCCCTTTTAAGTCCTCCTACTTT
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