EMLSAT00000001127, EMLSAT00000001127-696974 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001127
Unique NameEMLSAT00000001127-696974
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s118supercontigLSalAtl2s118:294859..295984 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001127 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001127EMLSAG00000001127-683893Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004941EMLSAE00000004941-713869Lepeophtheirus salmonisexon
EMLSAE00000004942EMLSAE00000004942-713870Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775993auto775993Lepeophtheirus salmonispolypeptide
EMLSAP00000001127EMLSAP00000001127Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001127

>EMLSAP00000001127 ID=EMLSAP00000001127|Name=EMLSAP00000001127|organism=Lepeophtheirus salmonis|type=polypeptide|length=351bp
MSPNSASEGRSMESNEIGGHCSSTLSNGPERVGVEQGSPFSNEIHLKLMD
KIALALGTLFLVPIRGLLVLASLGLGWLVAKIGLYGLTGEXIEGRARKGW
RRTLLSYYGIIAKMVFWSAGFQISVKGEQASRSEAPILVGAPHSSFLEGV
IIVMCGSSPVSRHENRHAILISSIQLFFQTIFVDRRKSDSRKETMEMIRK
RSLDPDNDYTQLFLXPEGTNTNRKVLIRFKVGAFAPGVPVQPVLIRYPGY
DRIDAITWTYNQSHSYAYSVWLLLAXPINRVEVEFLPVYHPSQEEKDSAE
LYAKNVQKIMANKLGIRATDITYSKYYEEYVNGYELQNSTNNNSSSMKKE
I
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mRNA from alignment at LSalAtl2s118:294859..295984-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001127-696974 ID=EMLSAT00000001127-696974|Name=EMLSAT00000001127|organism=Lepeophtheirus salmonis|type=mRNA|length=1126bp|location=Sequence derived from alignment at LSalAtl2s118:294859..295984- (Lepeophtheirus salmonis)
ATGTCTCCGAATTCCGCCTCCGAAGGGCGAAGCATGGAAAGCAATGAAAT
TGGAGGGCACTGCTCCTCGACTCTCAGCAATGGTCCTGAGCGTGTGGGCG
TGGAGCAGGGAAGTCCCTTCTCCAATGAAATCCACTTGAAGCTCATGGAC
AAAATCGCGCTGGCACTGGGAACTCTGTTCCTTGTGCCAATTCGAGGACT
ACTCGTCTTAGCCTCTCTCGGTCTAGGATGGCTTGTTGCGAAAATAGGGC
TTTATGGACTCACTGGCGAGGYTATCGAAGGTCGAGCCCGCAAAGGTTGG
CGTAGAACTCTACTCTCCTATTACGGCATAATTGCCAAAATGGTGTTTTG
GTCTGCCGGGTTCCAGATAAGTGTTAAGGGAGAGCAGGCATCACGCTCTG
AGGCTCCTATCCTGGTTGGTGCTCCTCACTCCTCCTTTCTAGAGGGGGTT
ATTATCGTCATGTGTGGAAGTTCACCAGTTTCAAGGCATGAGAATAGACA
TGCCATACTCATCTCTTCCATTCAACTCTTCTTTCAAACTATTTTCGTAG
ACAGGTTCGTCAAAATAAATAGGTCTACTTCTTAATCATAAATCATAATT
AATAAACCCATTCCTTATTTCCAGACGGAAAAGTGATTCTCGCAAAGAAA
CGATGGAAATGATTCGAAAGCGCTCTCTGGATCCCGACAACGACTACACT
CAACTCTTCTTARGCCCAGAAGGCACGAATACCAATCGAAAGGTTCTTAT
TCGATTCAAAGTGGGGGCTTTTGCGCCTGGTGTACCTGTTCAGCCTGTTC
TAATACGATATCCAGGCTATGATAGGATAGATGCAATCACGTGGACCTAT
AATCAATCTCACTCTTATGCTTATTCAGTCTGGTTACTATTGGCTAYACC
CATCAATCGGGTGGAAGTTGAATTTCTTCCCGTTTATCATCCCTCTCAGG
AGGAAAAAGACTCTGCTGAGCTCTATGCCAAGAATGTGCAAAAGATCATG
GCTAATAAGCTTGGGATCAGGGCCACGGATATTACGTATTCAAAATATTA
TGAGGAGTATGTTAACGGCTATGAACTGCAAAATAGTACGAATAACAATT
CTTCATCCATGAAAAAAGAAATCTAA
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