EMLSAT00000001136, EMLSAT00000001136-696983 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001136
Unique NameEMLSAT00000001136-696983
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s118supercontigLSalAtl2s118:383449..387031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001136 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001136EMLSAG00000001136-683902Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004970EMLSAE00000004970-713898Lepeophtheirus salmonisexon
EMLSAE00000004971EMLSAE00000004971-713899Lepeophtheirus salmonisexon
EMLSAE00000004972EMLSAE00000004972-713900Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777115auto777115Lepeophtheirus salmonispolypeptide
EMLSAP00000001136EMLSAP00000001136Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001136

>EMLSAP00000001136 ID=EMLSAP00000001136|Name=EMLSAP00000001136|organism=Lepeophtheirus salmonis|type=polypeptide|length=1103bp
MKSRQYEDIVIDKPKGHSKDDRLSLKSSYDEVSVNFGKPVIHGSKSESTS
DCIFDSVTFQSPIEDLSPASREAVRQGIMPPVPAPRPSKLTQQSNEIYEN
VEILLQNQELLSKRIPRREEIYEDIDFPHRSPPSPPPRNTILIPEQPHLF
NSTIPDDLSGAKPKHNHISKLKTIDIRNAVEQWYEEAEEELERDLSIDLS
VLDQERGMSKKNPAPTLLRDFDPVLEEVESVNNSLSSNSLVDIMKDPLKS
EIEIIHNESENIYVAXPRRXASSESLDLPAPLIPPPPLPELEPPPLPPNK
PKTSESSTDILTEEEEVESKLRRLFKSEDKISTTSSSTTSSIDYESALKV
SSESASHLPPQRSFSAANLNLTKMASHLKRKMSDRVFMRKSDSWRRSPLI
ESENSTTTGAKSHSGVLSLWSGNKKAYQPKWCVLGNGNFQYFNDEDSLVI
PKELITLSSLLCLNKIKKDSDSDGFYCFDMSYCSLLSGKYSTKTFGARTY
HEREVWLERIVQSLNYKLSNHSMTQSTRLGWAYLKIGFAGTWNSTWISLA
NRSLSYFSLHEGMWEVMDLRKTKNISLKEGAEYLEPPFTSYPVLVIDFVD
RSLYIAVNSKIECNNWWLEVQSKAFTNGNTLVDQQMTLEEIPVIVDKCTK
HIFSHGCLSEGIYRQSGVKTKIDRLLNEFKRNAWTVQISKNDYSEHDVAN
TLKRFMRTLEEPLLTEGLRGNWMKNSCTKDIIDKKKGYRALLRKLPVINY
NTLRRLISHLSAIASQCDKNLMTNCNLASIWGPTLLTVDGQKANDFARTS
GESDVCRDLIEHYSELFDVKPEELKRERLFTEVLTQISTNHDAGQHGHLK
RSGEAMDNSEESSSHFRDLRIWVYIDTKTSENCVGLVVQPSMKALEMTQR
VLQKTQREGVNNLFLHEVVMEGALERPLHHSEVMLDVNLRWGSWSTEDRK
NNCLLLKRNTLYEQALPRAIPPLNFYAKAYFGENKARSKFSKHLFSMNNA
KVTYYKTGGDSMELGTWPIEDIKWYIGAEEKRKAPFRLNITFIEKDVPVC
RTKDHPYFGHTISFEHTEDFISWIXAMLVAEHPNNVSVPASLIVLNNNER
KID
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mRNA from alignment at LSalAtl2s118:383449..387031-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001136-696983 ID=EMLSAT00000001136-696983|Name=EMLSAT00000001136|organism=Lepeophtheirus salmonis|type=mRNA|length=3583bp|location=Sequence derived from alignment at LSalAtl2s118:383449..387031- (Lepeophtheirus salmonis)
ATGAAATCCAGACAATATGAGGATATTGTCATAGATAAGCCTAAAGGTCA TTCAAAAGACGATCGACTCTCCTTAAAGTCATCTTATGATGAGGTGTCAG TTAACTTTGGAAAACCAGTGATTCATGGCTCCAAGAGTGAGAGTACCTCG GATTGTATCTTTGATTCTGTCACTTTTCAGTCACCTATCGAGGATCTTTC TCCAGCTTCTCGTGAAGCAGTTCGTCAGGGGATCATGCCTCCAGTTCCTG CTCCCCGACCTTCGAAGCTCACGCAGCAGTCAAATGAAATCTATGAAAAT GTCGAAATACTCTTGCAAAATCAAGAACTCTTAAGTAAAAGGATTCCAAG AAGGGAAGAAATTTATGAAGACATTGATTTTCCTCATCGATCTCCACCTT CTCCGCCTCCTCGTAACACTATACTCATTCCAGAACAACCTCATCTATTC AACTCAACAATTCCAGATGATCTTTCAGGGGCTAAGCCCAAGCACAATCA TATCTCAAAGCTCAAAACAATTGATATTAGAAATGCCGTAGAACAATGGT ATGAAGAAGCTGAAGAGGAACTAGAGAGAGATTTATCTATTGATCTCTCT GTTTTAGATCAGGAGAGGGGAATGTCAAAAAAAAATCCTGCTCCAACATT GCTCAGGGATTTTGACCCTGTTCTTGAGGAAGTGGAGTCTGTTAATAATA GTTTATCCAGTAATTCTCTCGTAGACATTATGAAGGACCCTTTAAAGAGT GAAATAGAGATAATCCATAATGAGTCTGAAAATATATATGTGGCTTMTCC CAGACGAAWCGCTTCATCCGAATCGTTAGACTTACCAGCACCCTTAATTC CTCCTCCACCATTACCTGAGTTAGAGCCTCCTCCTTTACCTCCAAATAAG CCTAAAACGTCAGAAAGCTCTACTGACATTTTAACGGAAGAGGAAGAAGT CGAGTCGAAGTTAAGGAGGCTCTTTAAGAGTGAGGATAAAATATCTACAA CCTCATCGTCAACCACTTCCTCTATAGACTATGAGAGTGCTCTTAAGGTA TCAAGTGAATCAGCATCACATTTGCCTCCCCAGAGATCTTTTTCTGCTGC AAATTTGAACCTCACCAAAATGGCCTCACATTTGAAGCGTAAGATGAGTG ATCGAGTTTTCATGCGAAAGTCAGATTCATGGCGTCGTAGTCCCTTGATA GAATCGGAAAATTCAACCACAACAGGTGCTAAATCGCACAGTGGTGTACT TTCATTATGGTCAGGAAATAAAAAGGCTTATCAACCTAAGTGGTGTGTCC TTGGTAATGGAAATTTTCAATACTTTAATGACGAGGATTCTTTAGTGATA CCTAAGGAATTAATCACCCTAAGCTCTCTTTTGTGTCTTAACAAAATTAA AAAGGATTCCGATTCTGATGGTTTTTACTGTTTTGATATGTCATATTGTA GCTTGTTATCTGGAAAATACTCCACGAAAACTTTTGGAGCTAGAACGTAT CATGAACGTGAAGTCTGGTTAGAGAGAATAGTTCAATCTCTTAACTATAA ACTTAGTAATCATTCTATGACACAGTCAACACGTCTAGGATGGGCCTATC TTAAAATAGGATTTGCAGGAACCTGGAATTCTACTTGGATATCTTTAGCT AATCGAAGTTTAAGCTATTTCTCTTTACATGAGGGTATGTGGGAAGTAAT GGACCTTAGAAAAACTAAAAATATTTCATTAAAAGAAGGAGCAGAATATT TAGAACCGCCTTTCACTTCTTACCCAGTTCTGGTCATTGATTTTGTGGAT CGCTCTTTATATATAGCTGTGAACAGCAAAATAGAGTGTAATAATTGGTG GCTTGAGGTGCAAAGTAAAGCATTTACCAATGGAAACACTCTAGTAGATC AGCAAATGACTTTAGAAGAAATTCCAGTGATCGTGGATAAGTGTACCAAA CACATTTTTTCACATGGATGTTTGTCAGAAGGGATCTATCGACAGTCAGG AGTAAAAACCAAAATTGATAGGCTTTTGAATGAATTTAAAAGAAATGCAT GGACGGTTCAAATATCTAAGAATGACTACTCTGAACATGACGTTGCGAAC ACACTTAAGCGATTTATGCGAACTCTGGAAGAACCTTTATTGACGGAGGG TCTCAGGGGTAACTGGATGAAAAATTCTTGTACCAAAGATATTATAGATA AGAAAAAGGGGTAAGCAATCCAAGTGGATCTTTTTTTTTAGAATTAGAGC AATTATCTTCGTATAAATCTAGTTATTTCTATCTTTTGTAGTTATTAATA TGCACACATTTACAAACGAAAACTGTTTTATTTTTTAGATACAGAGCACT CCTAAGGAAGCTTCCAGTTATCAATTACAATACTCTTCGTAGATTAATAA GTCATTTAAGTGCTATTGCATCTCAATGTGATAAAAATCTAATGACTAAC TGCAATCTTGCCTCAATTTGGGGTCCAACTCTATTAACTGTCGATGGACA AAAAGCCAATGACTTTGCTCGGACGTCAGGAGAGAGCGATGTTTGTCGAG ATTTAATAGAGCACTATTCAGAACTCTTTGATGTTAAGCCAGAAGAACTT AAAAGAGAAAGGCTCTTTACAGAGGTTCTCACACAAATTAGTACCAATCA TGATGCAGGACAACATGGACATCTAAAGAGATCTGGTGAGGCAATGGACA ATTCTGAGGAATCATCTAGCCATTTTCGTAAGTGTTCGTTGCTTGGTTTG ATTATTTGTTTTGTGTTTTGTCTGTCTTCACCTTATTTARAGAGTTAACA ACTAAGTAACGAATACTTCCTTAGTTTCTTCCATAATTAATTGTTATTTT TTCCCCTTTGTTAATAACAGGTGATTTACGAATTTGGGTGTATATTGATA CTAAAACAAGTGAAAATTGTGTTGGTTTAGTTGTTCAGCCTTCAATGAAA GCTTTGGAAATGACACAAAGAGTCTTGCAGAAAACACAACGGGAAGGAGT TAATAACTTGTTCTTGCATGAAGTCGTTATGGAGGGTGCTTTAGAAAGAC CTCTTCATCATTCAGAGGTTATGTTAGATGTAAATCTTCGTTGGGGTTCT TGGAGTACAGAAGACAGAAAAAATAATTGCCTTCTACTCAAAAGGAATAC TCTTTATGAGCAAGCTCTACCTCGAGCCATTCCCCCTCTTAATTTTTATG CTAAAGCTTACTTTGGAGAGAATAAGGCTCGATCAAAATTCTCGAAACAT TTATTTTCCATGAATAATGCTAAGGTTACTTACTATAAGACAGGAGGGGA TTCAATGGAATTAGGAACATGGCCAATTGAAGATATAAAATGGTATATTG GTGCTGAGGAAAAACGGAAGGCTCCCTTCCGGCTTAATATAACCTTCATT GAGAAGGACGTTCCCGTGTGTCGAACAAAGGATCATCCTTATTTTGGCCA TACAATCTCTTTTGAACATACTGAAGACTTTATTTCTTGGATTNCAGCCA TGCTCGTTGCGGAACATCCTAATAATGTATCCGTTCCCGCTTCTCTTATA GTATTGAATAACAATGAAAGAAAAATTGATTGA
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