EMLSAT00000001139, EMLSAT00000001139-696986 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001139
Unique NameEMLSAT00000001139-696986
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s118supercontigLSalAtl2s118:408640..410742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001139 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001139EMLSAG00000001139-683905Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004982EMLSAE00000004982-713910Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777388auto777388Lepeophtheirus salmonispolypeptide
EMLSAP00000001139EMLSAP00000001139Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001139

>EMLSAP00000001139 ID=EMLSAP00000001139|Name=EMLSAP00000001139|organism=Lepeophtheirus salmonis|type=polypeptide|length=700bp
MSDSKEHAYTLFVSKIPNYTKEEDFQALFPESYRCFITKSSFSKKFRVGY
VYYSSSELYQKALQSKYQLPNGPVLTVKPAHDKASSLSXKKEALKRXSQI
RFDRKVAKEKQSRIILRNLSFKASEEDIKTVFSKYGALKHINILTKPDGK
RVGCAFLQYENRPQAAKAIKAANGSNFMGRPVALDWAVPKKDFQATNSKT
EVEVKNKDVDHLMSAEEDNGFGRDDKNGSEDDEDGFDGEDENMSVDGEEK
YEDGFDGEDENMSVDGEEKYEDDSERDSEDDDKDSRPKWESGHDVDEGRT
VFIRNLSFDSLEEDLASLIEERYGEVVFAKFVMDKIKEHPKGTAFVKFVQ
TKSAERAVNDKEPLILDDRTVYLCMAMKKSDADSINKKKEMDKKLGKDKR
NLHLAREGLIREGTRXAVDVSKTDLHLRTKIQKWKTNMLKDLSCFVSPVR
LCVRNIPEDFNDKRLRNLFSKYGVLSEAKVIRDEKMNPAKGNAELGFVTF
KEHEHALNALRAVNNNPTIFRKDCRPIVEFSIENLKAIKAREKRLQKSRE
NNPNFKKINTSTQKTKPAQTLNKKMEDSGETVHGFMGXKNDPKQKNLXSH
IGPKVRSARPKISRKDLKKGAKRKVLEKKIRTVPIQHKKDKTDHEENNPE
KKKKNKKKVKPETLKELKEEKSFNSLVQNYKTKLLDNYEPMAKRRKWFAE
back to top

mRNA from alignment at LSalAtl2s118:408640..410742+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001139-696986 ID=EMLSAT00000001139-696986|Name=EMLSAT00000001139|organism=Lepeophtheirus salmonis|type=mRNA|length=2103bp|location=Sequence derived from alignment at LSalAtl2s118:408640..410742+ (Lepeophtheirus salmonis)
ATGTCGGATTCAAAGGAACACGCTTATACACTTTTTGTGTCTAAAATTCC CAATTATACTAAGGAGGAAGACTTCCAGGCCTTGTTTCCGGAGTCTTATC GATGTTTTATCACAAAGAGTTCTTTTTCCAAAAAATTTCGTGTTGGGTAT GTGTATTATTCGTCGTCAGAACTCTATCAAAAGGCTCTTCAATCCAAGTA CCAACTCCCAAATGGACCTGTCCTGACTGTTAAACCCGCTCATGATAAGG CTTCATCTCTTTCAAAKAAGAAGGAGGCCCTCAAACGTKCTTCTCAGATT CGATTCGATCGAAAGGTAGCCAAAGAAAAGCAATCTCGAATAATCCTTCG TAATTTGTCATTTAAAGCCTCTGAAGAGGACATTAAAACAGTATTTTCAA AGTATGGGGCTTTAAAACATATCAACATCCTTACTAAGCCAGATGGAAAA CGGGTTGGATGTGCTTTTCTTCAGTATGAAAATAGACCACAAGCAGCAAA AGCTATCAAAGCTGCTAATGGGTCCAATTTCATGGGTCGCCCCGTGGCTC TTGATTGGGCTGTTCCCAAGAAGGATTTTCAAGCAACTAATAGTAAAACT GAGGTAGAAGTTAAAAACAAAGATGTTGATCATTTAATGTCAGCAGAAGA GGATAATGGCTTTGGAAGGGACGATAAGAACGGATCTGAAGACGATGAGG ATGGATTTGATGGTGAAGACGAAAATATGTCAGTTGATGGAGAAGAAAAG TATGAGGATGGATTTGATGGTGAAGACGAAAATATGTCAGTTGATGGAGA AGAAAAGTATGAGGATGATTCTGAACGGGACTCAGAGGATGATGATAAAG ACTCTCGTCCTAAGTGGGAGTCTGGGCATGATGTAGATGAAGGAAGAACC GTGTTTATAAGGAATTTAAGTTTTGACTCGTTAGAAGAGGATTTAGCTAG TCTTATTGAAGAACGCTACGGAGAAGTTGTTTTCGCTAAATTTGTCATGG ACAAAATCAAAGAACATCCCAAAGGAACGGCTTTCGTTAAGTTTGTCCAG ACTAAATCTGCTGAGCGCGCCGTTAACGATAAGGAACCTTTAATTCTTGA TGATCGAACAGTTTACTTATGTATGGCTATGAAGAAGTCAGATGCAGATT CCATTAATAAGAAGAAAGAAATGGACAAGAAGCTGGGTAAAGATAAGAGA AATCTTCATTTAGCMAGGGAGGGTCTGATTCGTGAGGGTACTAGASCCGC CGTTGATGTGTCCAAGACAGATCTTCATCTCAGAACTAAAATTCAAAAGT GGAAAACAAATATGCTGAAAGATTTGAGTTGTTTTGTATCTCCAGTCAGA CTCTGTGTTCGTAATATACCAGAGGATTTTAATGATAAAAGGCTAAGAAA TCTGTTTTCAAAGTATGGTGTTCTTTCTGAAGCTAAAGTAATTCGTGATG AAAAGATGAATCCTGCCAAAGGAAATGCGGAACTAGGATTTGTTACTTTC AAAGAACATGAACACGCTCTCAATGCTTTGAGGGCTGTTAACAACAATCC TACTATTTTTAGGAAGGATTGTAGGCCCATTGTTGAATTCTCTATTGAAA ATTTAAAAGCAATTAAGGCTAGGGAAAAAAGATTGCAGAAGAGTAGAGAA AATAATCCTAACTTCAAGAAGATAAATACTTCTACTCAAAAAACTAAACC GGCTCAAACATTAAATAAAAAGATGGAGGACTCAGGAGAAACTGTGCATG GCTTTATGGGTAGWAAGAATGATCCCAAACAAAAGAATCTTCSGAGCCAT ATAGGCCCAAAAGTACGATCTGCTCGTCCTAAGATATCTCGCAAAGACTT AAAGAAAGGTGCTAAGCGAAAGGTACTTGAAAAGAAAATTCGGACTGTCC CCATTCAACACAAAAAGGACAAGACTGATCATGAGGAAAACAATCCTGAA AAGAAGAAGAAAAATAAGAAGAAAGTGAAGCCAGAAACGTTAAAAGAACT AAAAGAGGAAAAAAGTTTTAATTCTTTAGTACAAAACTATAAAACAAAAC TTCTAGATAATTATGAGCCTATGGCTAAAAGAAGAAAGTGGTTCGCTGAA TGA
back to top
Add to Basket