EMLSAP00000001139, EMLSAP00000001139 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001139
Unique NameEMLSAP00000001139
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length700
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361RRM_1coord: 300..374
e-value: 0.13
score: 21.3
coord: 113..185
e-value: 3.5E-4
score: 29.9
coord: 450..525
e-value: 13.0
score: 2.8
IPR000504RNA recognition motif domainSMARTSM00360RRMcoord: 300..374
e-value: 1.6E-14
score: 64.2
coord: 113..185
e-value: 9.4E-20
score: 81.6
coord: 450..529
e-value: 2.9E-10
score: 50.1
coord: 10..78
e-value: 0.012
score: 23.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 114..182
e-value: 2.3E-16
score: 59.0
coord: 451..515
e-value: 1.2E-11
score: 43.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 299..378
score: 14.607
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 449..550
score: 12.714
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 112..189
score: 16.313
NoneNo IPR availablePFAMPF14259RRM_6coord: 301..372
e-value: 3.3E-10
score: 39.6
NoneNo IPR availablePANTHERPTHR24012:SF233SUBFAMILY NOT NAMEDcoord: 73..521
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 73..521
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 108..194
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 5..83
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 297..388
coord: 446..515
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 104..199
e-value: 7.6E-25
score: 86.4
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 268..381
e-value: 2.8E-17
score: 62.3
coord: 4..84
e-value: 3.6E-5
score: 23.1
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 448..518
e-value: 7.5E-15
score: 54.5

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001139 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001139EMLSAT00000001139-696986Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001139 ID=EMLSAP00000001139|Name=EMLSAP00000001139|organism=Lepeophtheirus salmonis|type=polypeptide|length=700bp
MSDSKEHAYTLFVSKIPNYTKEEDFQALFPESYRCFITKSSFSKKFRVGY
VYYSSSELYQKALQSKYQLPNGPVLTVKPAHDKASSLSXKKEALKRXSQI
RFDRKVAKEKQSRIILRNLSFKASEEDIKTVFSKYGALKHINILTKPDGK
RVGCAFLQYENRPQAAKAIKAANGSNFMGRPVALDWAVPKKDFQATNSKT
EVEVKNKDVDHLMSAEEDNGFGRDDKNGSEDDEDGFDGEDENMSVDGEEK
YEDGFDGEDENMSVDGEEKYEDDSERDSEDDDKDSRPKWESGHDVDEGRT
VFIRNLSFDSLEEDLASLIEERYGEVVFAKFVMDKIKEHPKGTAFVKFVQ
TKSAERAVNDKEPLILDDRTVYLCMAMKKSDADSINKKKEMDKKLGKDKR
NLHLAREGLIREGTRXAVDVSKTDLHLRTKIQKWKTNMLKDLSCFVSPVR
LCVRNIPEDFNDKRLRNLFSKYGVLSEAKVIRDEKMNPAKGNAELGFVTF
KEHEHALNALRAVNNNPTIFRKDCRPIVEFSIENLKAIKAREKRLQKSRE
NNPNFKKINTSTQKTKPAQTLNKKMEDSGETVHGFMGXKNDPKQKNLXSH
IGPKVRSARPKISRKDLKKGAKRKVLEKKIRTVPIQHKKDKTDHEENNPE
KKKKNKKKVKPETLKELKEEKSFNSLVQNYKTKLLDNYEPMAKRRKWFAE
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