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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s1193 | supercontig | LSalAtl2s1193:106505..110732 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001159 >EMLSAP00000001159 ID=EMLSAP00000001159|Name=EMLSAP00000001159|organism=Lepeophtheirus salmonis|type=polypeptide|length=1123bp
MSSSFYSPFLYGIYSSMLEPSPRYSPSVGGLVDSHRNLDTAVDLSRKSVP
PPPDIEPDEPEDSEDEAPLDLKVRTVNMSESLSPPPVSTTPLQRAEFLRI
AEMVSQGKNSASRPLLPPSNNHSLHHRGSRESSLERELASRCEYCGEESE
SPDFIPSDHGQGICQRGSLACSLCPKTFTQWAQLNDHKKNHHQKLKQRHY
PCQSCGKVFTSASNRNMHQRIHKGVRPFQCTPCGVYFRQKAHLQKHQKTQ
GHLQASELKEKNRLLECPPNNNNNNNKNSGTPHGEEESGSAGEEGECNIS
SSSSTTTSSVGNSLADDSSIPPPDSSTSQQLKRSSPKRKQLRPRRTPDES
SSSTPVRRRRNSSSTSSSTLKCDESILLENKIRSFVHYNESSHGYECQEC
SFSSHELSTLKGHVRGIHLRWDEEDSLKCRDCVISFPREFNLRIHNKKHE
NESGALHCDVCDAIFKVPHFLLKHMEDDHLACPSCGCIQDDKDSLLRHSR
DCLEDSCYYEDDEEEMEEDLISVMDEDDSGVGVGNESILPSPSPLXSTPN
IISKENRDAKKRKVDSLAESIRLKQELQRNNNNNVQKGSKRPFLSPIPGR
TKTDMSNIRALLSRPPDPPSGLNALMNHITSKISPNNYHHLHENNKHXKP
GGLSPPASPPPPNTTTISGSMSVKLVKGPPNHSHHHHHHEDHNMGLDLTV
GRRHRHDSLEEDHHHPKLSVGFSNNSFRSAVGRSFPPSHPSFPPHLNSFS
FFGLPPPGADPAFAENLLKLAAGLPAAPLHPPLHRPQDLKLPSPSSSSSL
PNSYIISAALGSSSLPTVFPGLPPTLIPTRPHPPSSLHEKDLTGGIGSRS
SSLMEARSNSSSSSSAPSSSNKPFRCTFCRKEFGHLSSLDSHMEHMHSGE
SKHTCEACGKSFSSKSNLTAHKKIHSGERPFECLVCHKRFRQKAHLQKHE
TTHSSATPYKCSICDKAFGHPSNLNTHMATHSNIRPYSCSECGKSYKDSA
SFKRHRASHSGSGSPPQVGSNSSLEGGNNINNPCSSCNESFMDLSSLRKH
MESVHPGGDPCDSIGEEDEHDEEESISTSGETPHGKNLANDSSGYSXSLE
NNNNTTTKGIDXTANEIKMDDSK back to topmRNA from alignment at LSalAtl2s1193:106505..110732- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001159-697006 ID=EMLSAT00000001159-697006|Name=EMLSAT00000001159|organism=Lepeophtheirus salmonis|type=mRNA|length=4228bp|location=Sequence derived from alignment at LSalAtl2s1193:106505..110732- (Lepeophtheirus salmonis)
ATGTCCTCTTCTTTCTATTCCCCATTCCTCTACGGAATATATAGCAGTAT
GTTAGAACCTAGTCCACGCTACTCCCCCTCAGTCGGAGGCCTAGTTGATA
GTCATCGTAACCTCGATACAGCCGTTGATTTAAGCCGTAAATCTGTACCT
CCACCCCCGGATATTGAGCCGGATGAACCTGAAGACTCTGAGGATGAAGC
CCCTTTGGACTTAAAAGTATGTAATTATTATTCTATTTATAGCGTTTATT
ATGTCTACTTATGTTCTCTATTATGTTTAGGTTCGCACTGTAAATATGAG
TGAGTCTCTCTCTCCCCCCCCAGTATCTACGACTCCTCTACAACGAGCAG
AGTTCCTTCGCATTGCTGAAATGGTGAGCCAGGGTAAAAATTCAGCATCA
CGACCACTGCTGCCTCCCTCCAATAATCATTCTCTCCATCATCGTGGCTC
ACGAGAGAGTAGTCTGGAAAGAGGTAAGAGAGGATGATACAATGAACGAG
GTCGGGCATCACATATGTATATATGTTAAATTATCTCTTACAGAACTTGC
AAGTCGATGTGAGTATTGTGGAGAGGAGTCCGAGTCTCCTGACTTTATTC
CTTCAGATCATGGCCAAGGGATTTGTCAAAGGGGCTCCCTTGCCTGCTCC
CTCTGTCCCAAGACCTTCACACAATGGGCTCAGCTCAATGACCACAAGAA
AAACCATCACCAAAAACTGAAACAGAGACATTATCCCTGTCAATCCTGCG
GAAAGGTAAGGCTTTTATTTATTTTATCTACGGATGAGTTCCTATGCTGA
ACGTGGATAACGTGGATACATATTATAATCAATCAATTAACTAATAAGTT
ATTGTCTCTTATCCTTTCATTTCTTCCTTCTATTTTTTGTCTTTTTTAAT
TCCATTGCTGCTTTCGCAAATTACTGGGATGACCTCTGGAATACAGAGAG
GGTAAACGGTGCTGTGTTATTAGTGGCTATAGGMACTTACTTCCTTCTCT
CTCTTATCTTTTGTCTTACTTAACTAGTTGATAAAATTCAAATTAAATAA
GTTTATTTACCACTTCTTTTTTTTTTGTTCACCCTTAGGTATTCACCTCA
GCCAGCAACAGAAACATGCATCAGCGAATTCATAAAGGAGTACGGCCTTT
TCAGTGTACTCCATGTGGTGTGTACTTTCGCCAAAAGGCTCACTTACAAA
AGCATCAAAAGACTCAGGGCCATCTTCAAGCCTCGGAACTCAAAGAAAAA
AATAGACTTTTAGAATGTCCACCAAATAATAATAATAATAATAACAAGAA
TAGTGGTACACCACACGGTGAAGAGGAGTCCGGCTCTGCTGGCGAAGAGG
GCGAATGTAACATTTCTTCCTCCTCATCAACAACGACATCTTCTGTAGGC
AACTCTCTTGCAGATGACTCCTCCATCCCTCCACCTGATTCTTCTACATC
TCAGCAGCTTAAACGCTCTAGTCCCAAAAGAAAACAACTTCGTCCAAGGC
GTACTCCAGATGAGTCTTCCTCATCCACTCCCGTAAGAAGAAGGAGGAAC
AGTAGTAGTACAAGTAGCTCTACTCTCAAGTGTGACGAAAGCATCCTACT
CGAGAATAAAATTCGATCCTTTGTACATTATAATGAGTCATCACACGGCT
ATGAGTGCCAGGAGTGCTCTTTCTCTTCCCACGAACTCTCTACTCTAAAG
GGCCACGTTCGTGGAATTCATCTCCGTTGGGACGAAGAAGATTCCTTAAA
GTGTAGGGACTGTGTCATCTCCTTCCCTCGAGAGTTTAATCTTCGAATTC
ATAACAAGAAGCATGAAAACGAGTCAGGAGCTCTACATTGTGATGTGTGT
GATGCCATTTTCAAAGTATGCAATCAAATCTACTTCTCTCTAAGCTAGTC
CCTTCTTTACAATGAATCCTTTTTTTCCTCCTCCTTTTCAGGTCCCACAT
TTTCTTCTCAAGCACATGGAAGACGATCATCTTGCTTGTCCCTCCTGCGG
TTGCATCCAGGATGATAAAGACTCTTTATTGAGACATTCCCGGGATTGCC
TAGAGGACAGCTGCTATTATGAAGATGATGAAGAAGAAATGGAAGAGGAT
TTAATCTCAGTCATGGATGAAGATGATTCCGGAGTAGGAGTTGGAAACGA
GTCCATCCTTCCCTCTCCCTCTCCTCTCKCTTCCACTCCCAATATTATTT
CGAAAGAGAACCGAGATGCAAAGAAAAGGAAAGTGGACTCCCTTGCAGAG
TCAATTCGTCTAAAACAGGAACTCCAGAGGAACAACAACAACAATGTCCA
GAAAGGAAGTAAAAGACCCTTTTTGAGTCCTATCCCTGGCCGAACAAAAA
CAGACATGTCCAATATTCGTGCTTTACTCTCAAGACCACCGGATCCTCCC
AGTGGACTTAATGCACTTATGAATCACATCACCTCCAAAATAAGTCCAAA
TAACTACCATCACCTACACGAAAACAACAARCATCRCAAGCCCGGAGGAT
TGAGCCCKCCTGCCTCACCGCCACCACCGAACACAACAACCATTTCGGGC
TCAATGAGTGTCAAACTAGTCAAAGGCCCTCCTAATCACTCTCACCATCA
TCACCATCACGAGGATCACAACATGGGATTGGATTTAACAGTGGGTCGGC
GTCATCGACATGACTCCTTGGAAGAAGATCATCATCATCCTAAATTAAGT
GTTGGCTTTAGTAATAATTCTTTCCGGAGTGCTGTCGGAAGGAGTTTTCC
ACCTTCTCATCCTTCGTTCCCTCCGCATCTAAACTCTTTTTCATTCTTCG
GACTACCTCCTCCAGGAGCAGATCCAGCATTTGCAGAAAATTTACTCAAG
TTGGCAGCAGGACTACCCGCAGCACCACTTCATCCACCCCTCCATCGGCC
TCAAGATCTTAAACTTCCAAGTCCTTCATCATCATCTAGTCTACCCAATT
CGTACATTATTTCGGCAGCCCTTGGTTCATCCTCACTTCCAACTGTATTC
CCGGGTCTTCCTCCTACTCTAATACCGACCCGGCCTCATCCTCCATCTTC
TCTCCATGAAAAGGATCTAACAGGTAAGAATCAAAAACCCTCCTCCCTCA
CTACTCTATAATGTGTACTAATCATCCTTATCTTTACTTAATTAGGAGGA
ATAGGCTCCAGATCCTCATCTCTCATGGAGGCCAGATCCAATTCAAGTTC
CTCTTCCTCTGCTCCTTCATCCAGTAACAAACCCTTCCGTTGTACTTTTT
GTCGGAAGGAGTTTGGGCATTTATCCAGTTTGGACTCTCATATGGAGCAT
ATGCACTCTGGGGAGTCTAAACACACCTGTGAAGCCTGTGGGAAGTCCTT
TTCTTCCAAGTCTAACCTTACAGCCCACAAAAAAATCCATTCTGGTAAGA
CATGGATTTTTTTATATAATACACATAATATAAAACTTCTGTATTATACC
TAAGATTAAGAATGTCCTTCAATTATCATTATGAATCATCTTTTTTTCTT
TCATTTTTTAGGAGAGAGGCCGTTTGAATGCCTGGTGTGTCACAAGAGAT
TTAGACAAAAGGCTCATTTGCAGAAGCATGAAACAACTCATAGTTCCGCA
ACTCCTTATAAATGTAGTATCTGTGACAAGGCATTTGGGCATCCATCCAA
TCTAAACACACATATGGCAACACATAGTAATATCAGGTAATAATGATTGA
CCATGAGGAAGAAAATATATCTTCTTTTCTCCATTATCCTGCGTCTCTCT
TGACGCAGGTATGTACATTCATACAATCCATGACGCAATTCTATTTATAT
GTTATTTCAGGCCTTACTCCTGCAGCGAATGCGGAAAATCATATAAAGAC
TCAGCAAGTTTCAAGAGGCACAGAGCAAGTCACTCTGGCTCTGGTTCTCC
ACCTCAGGTTGGCTCCAACTCTTCTCTTGAAGGAGGGAATAATATTAATA
ATCCATGTTCCTCATGCAACGAATCCTTCATGGATTTAAGTTCTCTTCGA
AAACACATGGAGTCTGTTCATCCAGGAGGAGATCCCTGTGACTCTATAGG
GGAGGAGGATGAACACGATGAAGAAGAATCAATTTCTACGAGTGGTGAAA
CCCCTCATGGAAAAAATTTGGCCAATGATTCTTCAGGGTATTCCTNTAGC
CTCGAAAATAATAATAATACGACAACAAAAGGGATTGATKCCACCGCTAA
TGAGATCAAAATGGACGATTCCAAATGA back to top
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