EMLSAT00000001180, EMLSAT00000001180-697027 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001180
Unique NameEMLSAT00000001180-697027
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1195supercontigLSalAtl2s1195:1905..3020 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001180 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001180EMLSAG00000001180-683946Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005147EMLSAE00000005147-714075Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768323auto768323Lepeophtheirus salmonispolypeptide
EMLSAP00000001180EMLSAP00000001180Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001180

>EMLSAP00000001180 ID=EMLSAP00000001180|Name=EMLSAP00000001180|organism=Lepeophtheirus salmonis|type=polypeptide|length=371bp
MDVFEKVSGFFKKKQVEIDTNICKLXYRXXASXFFACSLAGLANHYFGEP
ISCNFHDKDINSDLAKDFCWIHGSNYFPEAFDGHLKCAVDPTGRNTESVT
DTSYYQWVTMVLFLQAIICIIPYKIWKLNEGGLIKSFGTSGTMTQMDVDE
MSLSATAQSMSRHFFNLRDRYTEYFSKFFIVEITFFLISWGHFFFIDWFL
DGNFLDYGSSAVQYYGMSPLDREHYANPLCSTFPTEVSCXVPTIGSAGTP
VSFNSMCVLSQNIVNEKMYVFIWFWLIFLMILSTLNVIVRIVYIVIPSYR
AAYVSQKVSRYQCREIKMLITKKLKTQDAFILSQLAKNMDPALFDEFIHY
LLRHLDNSEDDEEKALCTTPC
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mRNA from alignment at LSalAtl2s1195:1905..3020+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001180-697027 ID=EMLSAT00000001180-697027|Name=EMLSAT00000001180|organism=Lepeophtheirus salmonis|type=mRNA|length=1116bp|location=Sequence derived from alignment at LSalAtl2s1195:1905..3020+ (Lepeophtheirus salmonis)
ATGGATGTGTTTGAAAAAGTATCTGGATTCTTTAAGAAGAAGCAAGTGGA
GATTGATACAAATATCTGCAAATTGCWTTATCGTAYCMCCGCATCCWTTT
TCTTTGCCTGCTCTCTGGCTGGCCTCGCAAATCATTACTTTGGGGAGCCT
ATAAGCTGTAATTTTCATGATAAAGACATTAATTCCGACCTGGCCAAAGA
CTTTTGTTGGATCCACGGATCAAATTATTTTCCAGAGGCCTTTGATGGTC
ATTTAAAATGTGCTGTAGATCCCACAGGACGGAATACGGAGTCTGTCACA
GATACATCCTATTACCAATGGGTCACTATGGTTCTTTTCCTTCAGGCTAT
CATCTGTATTATCCCTTATAAAATATGGAAATTGAATGAAGGAGGTCTCA
TCAAGTCCTTTGGAACTTCTGGAACAATGACACAAATGGATGTGGATGAA
ATGAGTCTCTCAGCTACAGCTCAGTCCATGTCAAGACACTTTTTCAATTT
AAGGGATCGCTATACAGAGTATTTTTCCAAGTTCTTCATCGTGGAAATTA
CGTTCTTCCTCATTTCCTGGGGACATTTCTTTTTCATAGACTGGTTTTTA
GATGGAAACTTTCTAGATTACGGCTCATCAGCAGTACAATATTACGGAAT
GTCTCCTCTGGATCGAGAACATTATGCAAATCCACTTTGCTCCACATTTC
CTACGGAGGTGAGTTGTMCCGTTCCCACCATTGGCTCTGCGGGTACTCCT
GTTTCCTTTAACTCCATGTGTGTCCTCTCACAAAACATTGTCAACGAAAA
AATGTACGTCTTCATTTGGTTTTGGCTCATCTTCCTCATGATCCTCTCCA
CACTCAATGTTATAGTCCGCATCGTGTACATTGTCATYCCCAGTTATCGA
GCTGCCTATGTATCCCAAAAAGTAAGCCGCTATCAGTGCCGTGAAATAAA
GATGCTCATCACAAAAAAGCTCAAGACGCAAGATGCATTCATATTGAGTC
AACTTGCAAAAAACATGGATCCAGCGTTATTTGACGAGTTTATTCATTAT
CTACTTCGTCATTTGGACAACTCTGAGGATGATGAAGAGAAGGCTCTTTG
CACCACGCCCTGCTAA
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