EMLSAT00000001185, EMLSAT00000001185-697032 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001185
Unique NameEMLSAT00000001185-697032
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1197supercontigLSalAtl2s1197:125747..128100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001185 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001185EMLSAG00000001185-683951Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005158EMLSAE00000005158-714086Lepeophtheirus salmonisexon
EMLSAE00000005159EMLSAE00000005159-714087Lepeophtheirus salmonisexon
EMLSAE00000005160EMLSAE00000005160-714088Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772797auto772797Lepeophtheirus salmonispolypeptide
EMLSAP00000001185EMLSAP00000001185Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001185

>EMLSAP00000001185 ID=EMLSAP00000001185|Name=EMLSAP00000001185|organism=Lepeophtheirus salmonis|type=polypeptide|length=372bp
MASFLENNLPSFAVVVGEEGDVVNGRQMPQKKSSYTDKRLIAFDDIFQRI
ISGVHILKARRIEDWDHALCWRRAKEFETRTKRHNFELKQKVHMVKSKGC
SNNSMHCNQALRVGRNILTSYIHYLPLSSNQLSPDGILTSFNLLIDLFDK
FEGGESLIHKIEEIKELIGKDSIDTKSKDAKKLIADLALLKFGKKPNPIK
NVKSNVLLQERIQRSRSIRYGNLKNNLRSSKEDNYKQTAQISSLPQEEPS
FSRSQSNNDQFSVKILLSRIAELESGIENVMVNSSSVSYIKNKNGPLSEM
KDEDISKGTSSVDITDTSLKEIQSLWKPGTHMCDFLQIELCINQILDEIL
LELSEEMTSPTLIFDILKRELL
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mRNA from alignment at LSalAtl2s1197:125747..128100+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001185-697032 ID=EMLSAT00000001185-697032|Name=EMLSAT00000001185|organism=Lepeophtheirus salmonis|type=mRNA|length=2354bp|location=Sequence derived from alignment at LSalAtl2s1197:125747..128100+ (Lepeophtheirus salmonis)
AAAAAAATGCGATAGAAACATTGGAAAAGCCTTTCTATATTAATATAATA
TAATGAAAATGAAAATATTATACCTTTAATCGATATAATTTGAGGTACTT
GGATCATAGAATGACTTGATACGTCCTTTTCTTGACCTTCCCTAATCATT
TACCCTCACTTCATTTTGTAAGGTAACGTAATGATCATTGATCCTCATCT
TGGCTTTTAAAGAAAGAATGAATTTATTCAGGTTTTATCTTAATAATGAC
TAACTGAGAATGATGTTTTCTTTTTGTAGAGTTAATTTCCGAAGAAGAGC
CTCATGCCGTCCCGTGCTGAAGATATTCTCAAGGGGTTTCGCGTCAATTG
GATGAATCTAAGAGATGCGGATACGGGGAAAATCCTTTGGCAAGGGAACG
CGGATCTTTCAGTCCCAGAGGTTGAACACGAAGCTCGAGTGCCAAAAAAG
ATACTCAAATGCCGTGCCGTGTCAAGGGAAATCAATTTCTCATCTTCCGA
GCCTATGGAAAAATTTAGATTAGAACAAAAAGTGCTTTATAGGGGTCGTT
GTCTAGAGGAATGGAACTTTGACTTTGGATTCGTCATTCCAAACTCCACA
AATACTTGGCAAAGTCTAATAGAAGCTGCCCCAGAGTCACAAATGATGCC
CGCTCGAGTCCTTAATGGAAATGTTGTGATTGAGACCAAGTTCTTTGATG
ATAATTTAGAAGTGTCTACTTCTAAAGTTAGACTTTACTACGTTTAAAAA
ATAAATTAGTTTCACTCCCAACCCTACCCCAATTCACATTTATATTACAT
GTACTTATTTCCGTCCACATCCAATGGCCTCCTTCCTAGAAAATAATCTT
CCCTCTTTTGCTGTTGTTGTTGGAGAAGAGGGAGATGTCGTGAATGGACG
GCAGATGCCACAGAAAAAGTCATCTTATACCGATAAAAGGTTAATTGCAT
TTGATGATATATTTCAACGAATAATATCTGGGGTTCATATATTGAAAGCT
CGGAGGATTGAGGATTGGGATCATGCTCTTTGTTGGAGGAGAGCGAAAGA
ATTTGAAACTCGAACAAAGAGACATAATTTTGAGTTGAAGCAAAAAGTAA
GTCATTTTATTGAGTTTTTGATAAATTTTACATTATGATTGCTTTATATT
TCAGGTACATATGGTCAAGTCAAAAGGATGCTCAAATAATTCCATGCATT
GCAATCAAGCCCTTCGTGTTGGAAGAAATATATTAACATCCTATATTCAC
TACCTTCCTTTATCCTCTAACCAACTCAGTCCTGACGGGATTCTTACTTC
GTTTAATCTCTTAATTGATCTTTTTGATAAATTTGAGGGTGGAGAATCAT
TGATTCATAAAATAGAAGAGATAAAAGAGCTGATTGGAAAAGACAGTATT
GACACTAAAAGTAAGGATGCCAAAAAATTAATTGCTGATCTTGCTCTACT
CAAATTTGGAAAAAAACCAAATCCTATTAAAAATGTCAAAAGTAATGTCC
TGCTGCAGGAACGAATACAACGCTCCAGATCAATACGCTATGGGAATTTA
AAAAATAATTTACGTAGTTCCAAGGAAGATAATTATAAACAAACAGCTCA
GATATCCTCTCTGCCTCAGGAGGAACCATCCTTCAGTAGATCTCAATCAA
ATAACGATCAATTCTCGGTAAAAATTTTGCTTTCTCGCATTGCTGAACTT
GAATCTGGCATCGAGAACGTAATGGTCAACTCCAGTAGTGTTAGTTATAT
TAAAAATAAAAATGGGCCTCTTTCTGAAATGAAAGACGAGGATATTTCCA
AAGGAACCTCGTCAGTGGATATAACTGATACTTCTCTCAAGGAAATACAA
TCCCTCTGGAAGCCTGGAACCCATATGTGCGACTTTTTACAAATAGAACT
GTGCATTAATCAAATTCTAGATGAAATTTTGTTGGAGTTATCGGAAGAAA
TGACTTCACCCACGTTGATATTTGATATTCTTAAAAGAGAGCTTTTGTAA
AGGTTATTGATTTGAATTCATGTATTTTTCTTCTTCTTTCAAATAACGTC
TTTGCAATTGATTTAATTATTTCATGTTTTTTAGTATATAATTATATATA
TATGTTATATATATTCTCTACAATGATCATAGATTGATCTGTTTTGCAAG
ATTATAGTTTCAATCGACCGGTGATTCACTTATTTGACATGTATAATTTT
CCCCTCTGAATTGACTACACATCATTCTATTCTTGAAAAGAATCAATTCT
TTTCAATAAATCAGAAATTGCCAACTTTTTTTATTTATTATTAATATATT
CAGTATCTCGGGTGTACCAATGAGGTTTTGTTTTTATCTATGTTTACATC
CGCG
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