EMLSAT00000001217, EMLSAT00000001217-697064 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001217
Unique NameEMLSAT00000001217-697064
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:167499..170412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001217 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001217EMLSAG00000001217-683983Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005297EMLSAE00000005297-714225Lepeophtheirus salmonisexon
EMLSAE00000005298EMLSAE00000005298-714226Lepeophtheirus salmonisexon
EMLSAE00000005299EMLSAE00000005299-714227Lepeophtheirus salmonisexon
EMLSAE00000005300EMLSAE00000005300-714228Lepeophtheirus salmonisexon
EMLSAE00000005301EMLSAE00000005301-714229Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773720auto773720Lepeophtheirus salmonispolypeptide
EMLSAP00000001217EMLSAP00000001217Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001217

>EMLSAP00000001217 ID=EMLSAP00000001217|Name=EMLSAP00000001217|organism=Lepeophtheirus salmonis|type=polypeptide|length=803bp
MYIPSXHLPPSHLHHPSYSSSSNSSTSSSMHHHQPNFSALHHIDFRKVPQ
HHHSGRRKATTLDSDKRRILLDKMKKNSFFFGSGPFNAPPSNCGPCNGXS
TCCSDWDXVGPPLRYRNSSANSLNLFGGDEDDHLPLQVSSIDGIRISNNR
RSRSSDYDSKLSSRHLQDTVKNEISLNRLESSLTVHEKYRSSGKISNKFR
NKFMMGSNSNQSNSVTKGGNNDFFSSYGNSGEIIDTSSSISQCSKYRSSS
MSALNSVEDVSNDVKSHVHSSWQRDSGGAGTKNSIDLIDNKSDXEGDENL
PPSETRVIVESIPQHIELVEKDCQTEEIHKDEIVSEDERGSSKNEDHTGS
TCTNCDYDKDSGIANELGSDSISSGSDSGFHKLSSPINNKPCHCCYEGPA
LKVNQSTETDPLLTASPSKPPRSSRDRNKIERKHSRASSVDRREIFKKYI
NDINQLSHNIQLNDTEDPAPSSIRSVKSDDEDDSVSGSAIMNPTLKKEFR
LVRLLNVEQRTLGIFIARMEQQEVGCIGYYIAHINFDGIVHRDGRLMIGD
EIVNVNGRRXRGLPMDEAKALLNYKNDSSVDIVIARVITPSSTSKYSNIS
NSPLSLLANHNEEDLINLSSRPLLKSSSHEEVLPTVIRVNCRQLPNQPNF
CTLPRKDTILSGSNRKLPSIVTSPSPVSTTSIGTTGSPQIYRTIVYQKGP
GKKSLGFSIVGGRDSPKGSMGIFVKTILPTGQSAEDGRLQEGDEILAVNG
EILHGLNHGEAIAIFKRIKSGPVVLQIGRRKTNPSSPKSRSCDDLLDSHA
SSS
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mRNA from alignment at LSalAtl2s11:167499..170412-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001217-697064 ID=EMLSAT00000001217-697064|Name=EMLSAT00000001217|organism=Lepeophtheirus salmonis|type=mRNA|length=2914bp|location=Sequence derived from alignment at LSalAtl2s11:167499..170412- (Lepeophtheirus salmonis)
ATGTACATCCCTTCGCMTCATCTCCCACCCTCTCATCTCCATCATCCCTC
TTACTCCTCATCTTCCAATTCATCCACATCCTCCTCTATGCACCATCATC
AGCCCAACTTCTCAGCCTTGCATCATATAGACTTTCGCAAAGTGCCGCAA
CATCATCACAGCGGTAGACGGAAAGCTACAACCCTTGACTCCGACAAGAG
ACGTATCCTCTTAGACAAAATGAAGAAAAATTCTTTCTTCTTTGGCAGCG
GACCCTTCAATGCTCCACCATCAAACTGTGGTCCTTGTAATGGATMCTCT
ACTTGTTGCTCAGATTGGGACGKCGTGGGMCCGCCTCTTCGATATCGTAA
TTCTTCGGCAAATTCCTTAAACCTATTTGGTGGGGATGAGGATGATCATT
TACCGCTTCAAGTCTCTAGTATTGATGGAATCCGCATTAGTAATAATCGG
AGATCACGGAGCTCTGATTATGACTCCAAGTTGTCTTCGAGACATCTTCA
AGATACAGTCAAAAACGAGATTTCTCTAAATAGGCTTGAATCAAGTCTTA
GTATGTCAAATTATAAGAGTCATCAACAATTTCAGTCTTCTTCCTCTTCA
GCGTCATCGTATACAAGGAAAGGATTTATAATCCATATCTCTTTTTCCAT
GACCACAATTTATTGATTCATTTCTTCTTTGTTTTTTTTTCTTTGCAAAG
TTTTAAAAAGATTCTCCTTGAATTAAAAAGCACAATAGTAAAAAATGATA
AATTAACGAAAATATTTTTTTGAAAGTAAAGGAAAAAAAAGTTTAAATTA
CATAAGGAATTATGTTGAGGCTATGGAAAAAAAATGTTGAAATAAATGTC
TTTACAGCATAAAAAATAAAATTAAAGCAGTACATGAAAAGTATCGAAGT
AGTGGGAAAATATCAAACAAGTTTCGAAACAAGTTCATGATGGGCTCTAA
CTCTAATCAATCAAACTCCGTTACCAAAGGAGGAAACAACGACTTCTTTT
CATCGTACGGAAACTCAGGAGAAATAATTGATACATCTTCCTCCATTAGC
CAATGCTCCAAATATCGGAGTTCCTCAATGAGTGCTCTAAATAGTGTTGA
AGATGTGAGCAATGACGTTAAAAGCCATGTCCATTCTTCTTGGCAACGAG
ACTCAGGAGGGGCTGGCACTAAAAATAGTATAGACTTGATTGACAATAAA
TCGGACGRTGAGGGTGATGAAAATTTGCCTCCATCCGAGACTCGAGTGAT
AGTAGAGTCCATTCCTCAACACATTGAATTAGTTGAAAAAGATTGTCAAA
CTGAGGAGATACATAAAGACGAAATTGTTTCTGAGGATGAACGTGGGTCT
TCCAAAAATGAGGATCATACGGGAAGCACTTGCACAAATTGCGATTATGA
TAAGGATTCTGGCATAGCCAATGAGTTAGGTTCAGATTCCATATCCTCAG
GCTCTGATTCTGGGTTTCATAAATTATCTTCGCCAATAAACAATAAACCT
TGTCATTGCTGCTATGAAGGTCCTGCTCTTAAAGTCAACCAAAGTACGGA
AACGGATCCCCTTCTTACAGCTTCTCCCTCTAAGCCCCCTCGATCTTCAA
GAGATCGAAATAAAATTGAGCGAAAACATTCAAGGGCCTCTTCGGTGGAC
CGAAGAGAAATATTCAAAAAATACATTAACGACATTAATCAACTTTCCCA
TAATATACAACTGAATGATACCGAGGATCCTGCTCCTTCTTCAATTCGTA
GTGTCAAATCTGATGACGAAGATGACTCTGTTTCAGGCTCTGCAATAATG
AATCCTACACTAAAAAAAGAATTTAGACTCGTTCGCTTACTGAATGTTGA
ACAACGCACATTGGGGATATTTATCGCCAGAATGGAACAACAGGAAGTTG
GATGCATAGGATACTACATTGCACACATTAATTTTGACGGAATCGTTCAT
CGGTAAATCAATAGCATACACTTTTTTATTGTATTTGTAAAAGCAATAGT
TATTTTTCAGTGACGGTCGTCTTATGATTGGAGACGAAATTGTAAACGTG
AACGGACGGCGGKTACGTGGKCTTCCTATGGATGAGGCCAAGGCCCTTCT
TAATTATAAGAATGATTCTTCTGTAGATATCGTGATTGCTCGAGTCATAA
CCCCTTCATCGACATCAAAATATTCAAACATCAGCAATAGTCCTCTCAGT
TTATTGGCAAACCATAACGAAGAGGATCTAATTAACCTCAGCTCTCGTCC
TCTCCTCAAATCATCGTCTCACGAAGAAGTTCTACCTACTGTGATCCGTG
TCAATTGTCGACAACTTCCAAATCAACCTAACTTTTGTACTCTTCCTCGA
AAAGACACAATTCTCAGTGGTAGTAATCGTAAACTMCCATCCATAGTAAC
ATCCCCTTCCCCTGTTTCGACGACCTCTATTGGAACGACGGGGAGTCCAC
AAATCTATCGTACGATTGTCTATCAAAAGGGACCAGGGAAAAAGAGTTTG
GGCTTCAGTATTGTGGGTGGAAGGGACTCACCTAAAGGTAGCATGGGCAT
TTTTGTAAAGACTATTCTTCCCACGGGACAGTCCGCGGAGGATGGAAGAC
TTCAAGAAGGTGCGTAACACATTATTCAAAAGTATATTCTTATAAAATAA
TTTTATTATATTATATAGGGGATGAAATCTTAGCTGTAAATGGCGAAATT
CTTCATGGGCTTAATCACGGAGAAGCAATTGCCATTTTCAAAAGAATAAA
GTCTGGACCAGTCGTACTCCAAATTGGACGTAGAAAAACCAAGTAGGATT
CATTAAATAATATCATTTAATGAACCACCTATAAACCATATATTTTTCAG
CCCTTCTTCACCTAAGTCGAGATCCTGTGATGATTTATTAGATAGTCACG
CTTCCTCCTCGTAA
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