EMLSAT00000001218, EMLSAT00000001218-697065 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001218
Unique NameEMLSAT00000001218-697065
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:21782..22338 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001218 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001218EMLSAG00000001218-683984Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005302EMLSAE00000005302-714230Lepeophtheirus salmonisexon
EMLSAE00000005303EMLSAE00000005303-714231Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769531auto769531Lepeophtheirus salmonispolypeptide
EMLSAP00000001218EMLSAP00000001218Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001218

>EMLSAP00000001218 ID=EMLSAP00000001218|Name=EMLSAP00000001218|organism=Lepeophtheirus salmonis|type=polypeptide|length=166bp
MKILIVLGLLLGSSLASGYQHPLHSYPGPFYPSHFTPQSEFYTSRHLLPQ
SNSYPVPHQFHQSNSHPVPYPVPYPVPIQTSTSVPIIIATPVPVFITPNS
LFNSQRDIFSKGSSDIGTNIKSAQFGNSFLIGKVQSXSSTRTPTRLDNKS
SNRFPNNQIVTSYSRS
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mRNA from alignment at LSalAtl2s11:21782..22338-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001218-697065 ID=EMLSAT00000001218-697065|Name=EMLSAT00000001218|organism=Lepeophtheirus salmonis|type=mRNA|length=557bp|location=Sequence derived from alignment at LSalAtl2s11:21782..22338- (Lepeophtheirus salmonis)
ATGAAGGTAAACCAGATCAAATAAATTGTGATAATATTTCATCATATCAT
TTCTTTATTCAGATTCTTATCGTCCTTGGATTACTTTTGGGTTCCTCCCT
TGCAAGTGGATATCAACATCCTCTGCATTCATACCCTGGTCCCTTTTACC
CATCACATTTCACACCTCAGTCCGAGTTCTATACTTCAAGACATCTACTT
CCTCAATCCAACAGTTATCCAGTACCACATCAATTCCATCAATCTAACAG
TCATCCAGTTCCTTATCCAGTTCCTTATCCAGTCCCTATTCAAACATCTA
CTTCAGTCCCTATTATTATTGCAACCCCTGTTCCAGTTTTTATTACTCCA
AATTCTCTATTCAACTCTCAAAGAGATATATTTAGCAAAGGTAGTAGCGA
CATTGGTACTAATATCAAGAGTGCACAATTTGGTAACAGCTTCTTGATTG
GAAAAGTACAGTCTKCAAGCTCTACTCGTACACCCACAAGATTAGACAAT
AAATCCTCCAACCGATTCCCCAATAATCAAATTGTAACCTCATATTCTCG
TAGCTAA
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