EMLSAT00000001230, EMLSAT00000001230-697077 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001230
Unique NameEMLSAT00000001230-697077
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:54372..55068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001230 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001230EMLSAG00000001230-683996Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005361EMLSAE00000005361-714289Lepeophtheirus salmonisexon
EMLSAE00000005362EMLSAE00000005362-714290Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770797auto770797Lepeophtheirus salmonispolypeptide
EMLSAP00000001230EMLSAP00000001230Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001230

>EMLSAP00000001230 ID=EMLSAP00000001230|Name=EMLSAP00000001230|organism=Lepeophtheirus salmonis|type=polypeptide|length=174bp
MKILIVLGFLLDSSLGSGYRHHLNSYPSPFYPSHLTPQSEFYTSRHPFLH
SNNHLMLHQFHQSNSHPVPQTFHHSNSHPFLYPVPIQTSTPKPIIVVTPV
PVFVTPDSLFNSQRETFSSSSSNSGTNLNNGQFGNNLLNGKVHSTSFTPT
PSRFDNNSSDQFPNDQILSPYYHN
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mRNA from alignment at LSalAtl2s11:54372..55068+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001230-697077 ID=EMLSAT00000001230-697077|Name=EMLSAT00000001230|organism=Lepeophtheirus salmonis|type=mRNA|length=697bp|location=Sequence derived from alignment at LSalAtl2s11:54372..55068+ (Lepeophtheirus salmonis)
CAACAATTCACTCAGCATATTACAATATGAAGGTAAATCAGATCCAATGA
ATTGGGATTATATTTCATTATATCATTTCTTTATTCAGATTCTTATTGTC
CTTGGATTTCTTTTGGATTCCTCCCTTGGAAGTGGGTATCGACATCATCT
TAATTCATACCCTAGCCCCTTTTACCCATCGCATCTCACACCTCAGTCCG
AGTTCTATACTTCAAGACATCCATTTCTTCATTCCAACAATCATCTAATG
CTACATCAATTTCATCAATCTAACAGTCATCCAGTCCCCCAAACATTCCA
TCATTCTAACAGTCATCCATTTCTTTATCCAGTCCCTATTCAAACATCTA
CTCCAAAGCCTATAATTGTGGTAACCCCAGTTCCAGTCTTCGTTACTCCA
GATTCCCTATTCAACTCTCAAAGAGAAACTTTTAGTAGTAGTAGTAGCAA
CTCTGGAACTAATCTCAACAATGGACAATTTGGTAACAACTTATTGAATG
GAAAAGTCCATTCTACTAGCTTTACTCCTACACCCTCAAGATTTGACAAT
AACTCCTCTGACCAATTCCCCAATGATCAAATATTATCTCCATATTATCA
CAACTAAAACTATTGGATATTTTTGTCTAAATAATTGCAATTTCATTGTA
TCAAAGGCTTTTATTTATTTAACTCTATGTATTTATTATAATTGGAA
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