EMLSAT00000001235, EMLSAT00000001235-697082 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001235
Unique NameEMLSAT00000001235-697082
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:296044..301669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001235 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001235EMLSAG00000001235-684001Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005385EMLSAE00000005385-714313Lepeophtheirus salmonisexon
EMLSAE00000005386EMLSAE00000005386-714314Lepeophtheirus salmonisexon
EMLSAE00000005387EMLSAE00000005387-714315Lepeophtheirus salmonisexon
EMLSAE00000005388EMLSAE00000005388-714316Lepeophtheirus salmonisexon
EMLSAE00000005389EMLSAE00000005389-714317Lepeophtheirus salmonisexon
EMLSAE00000005390EMLSAE00000005390-714318Lepeophtheirus salmonisexon
EMLSAE00000005391EMLSAE00000005391-714319Lepeophtheirus salmonisexon
EMLSAE00000005392EMLSAE00000005392-714320Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776004auto776004Lepeophtheirus salmonispolypeptide
EMLSAP00000001235EMLSAP00000001235Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001235

>EMLSAP00000001235 ID=EMLSAP00000001235|Name=EMLSAP00000001235|organism=Lepeophtheirus salmonis|type=polypeptide|length=121bp
MSVRIYIFDAIGFLNLMMWVTLRNTTLKIGGNEPLRKINVNIKRIVKFKQ
ESINMKEIFTHKGNVIESQSQVVSRRFRVQVKYRVIDSEIKLSGKSRVQV
STSDGSIYVLAYELFCRPNIL
back to top

mRNA from alignment at LSalAtl2s11:296044..301669-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001235-697082 ID=EMLSAT00000001235-697082|Name=EMLSAT00000001235|organism=Lepeophtheirus salmonis|type=mRNA|length=5626bp|location=Sequence derived from alignment at LSalAtl2s11:296044..301669- (Lepeophtheirus salmonis)
ATGTCGGTATGTTTAAAAAAAGAAACCGAAAAACAATATGGTATTCCCGA CAGTTTGTAGGAAAGCAGCTTAGCTGTAATGACGTTTCAATAGATCAGCA CTGAATCGCTATTAATTAAAGGAAATATACAAAAATAACACCCTGTATCT TGCCAGGACATATATAGGAATTACGTCCATGTTGACCCTCAATTCTTCTC CAATTCCAACAAGGACTTGAACTTAAAACTCCCTACAAATTCTCAGTCTT ACTTTTTGTCATTCACACACTTGGGATTACTTTATACTTAAATCTTTTCT CCTCAAGAATGAAAAAATAAAAACAATGTTCAGGTTACAACTACAAAAAG TCAAATACTTATCTAAGGTTATATTTTATACAACTCTACAAAGGTTAACA AACCAACGAATGAGTATTTAATTATAATATGAATTAATATTGGATCTGTC ACGAATGTATGACTTAAAATCTATTTTTTTCGCCCTATAATATAAAATAA ATTATATAATTTGTACAATCCCTTGCTGGAATTCCGTGGGATCTCAAAAA TGTAAAAATTAACTTTTCGGGAAATGAAAAAAAAAGTAAAAACATTTTTA GATCCAGAATTTAGATGCATAAAATGTATGCCTGTATTGAAATAGAATTT GATGGAAATGTTTAGGTCGTTAACTACTTTTAGATACTTATATTGTATGC TTATATAAGAAAGAGAAAGGCATAGTACTTTTTTAATAATAAAAAAAGTA TACGTGATTTTCAAAACATCTCTATTGTTTTATTTTTGATGCATTTTATT CATATAACGATAACCTTCTTATGTCACGTAATCTCTTTATTCACTCAATA CAAGCAAGTAAAAAAAGTTGTATTTATATTTGCCCTGTTTTTGGATTAAT ATCCCTCCTTCATAAAACCATTTTCTGCMGGAGACAATYAAAACTGARTT TGGTTTGATARCACAKAAGCCATTTTAATGTAAAAATGGGATTTTGTGCC CAAATTTGCCCCTTTTAGACCTCATGTACTCTCCCAAATATGATGTTATC AGTATTTAGAGTATAATTAAAAAAATACTTAATACTGACTAACTAGTTAT AATAATAACATCAAAAGAACAATTTCTTACTCAACTTACATCCAAAGATA TCGTTTAAAAAAGAAAAGAAAAAAACACTGAGAATTCATAAAGTTGGATT AAGTTAAGTCAGTGTTTTATTATAAGAAAAGTGTTTTTGTATCTAGGGGA AAATATAGAACCAAAAATGGAACAACTTAATATACTGATTAGGGATGAGT ATCGGCCTGAAAATCCTACKCCAGTCGGTAACCTATGTAATTTTAACCTA TTCGGCCCAAATTCTCTCTGTACCAGTCTATTCAGTTTACAGTAATGATT TAACGTCTTTTTTCTATATTAATTGAGACAAAAATAAATTTGGCCTTTGA AAAATTCCCTTCTTAAGACCGAACTGAAAAAAAAAAAAAATACATATTTA ACAAAAAAATGTTTAACCATTTCAATCTCTATACATTTTCTTTTTTTTTT ACAGGTAAGAATTTATATTTTTGATGCGATAGGATTCCTAAACGTAATGA CCAAACATTTATATATTCTTTTTTTAAAATAATGTACGAATATATATGTG TAAAGCTTTAACTCACTGATAAAGTATATAAAATATTACAAAATTTAGCA TAAATAATAAGAATAATAAATAGGTAGGTGGCCTCCAAGGGAAAATAAAG ATGGCATAATTAAAAATTTGCATATAATAATATAATTAATAAAATTCTTT TATTTTTCCTTCCTAATTCTTCGAAATATATTTTTTAAATATGGATATGA AAAAAAGAAAAAATATTCTGCATCTCGAGTTCTTCAAATGAAGAAATATG AATAATATTTAGCAAAAAATAGTATTACTCATATTTTTTTTGTATGTAGA TATGCTTCACACATATACAACTCATCAACTGAATATATTTGGCTTCTCCT TTTAATTTAAATTGTATTTTTTTACCCTCATAATGACCACTAGTTAAATG CGTAATCATATTTTTTGAAATTAGAATCAGGGACTATTTATAAGAACGAA AAAGTTTTTTTTTGAAAATCTGATAATTTTTTAGTTTTTGGTTAGAAATC AAGAATTTTTGACTGACTGTTTCTAAAAAAATGAATGATTTTATCCATAA AAAACTTCTACAAGTAGATTTGTAACTTAAAAAATAGGTGGTTTTATAAT TTTTTTAATGAGGCAATACATTTGCAACACATTGGAAGGTCATAAGTAAG AAATTCACATATTTTCTGTTAAATAATCCAATAATAATTTATTTGCAATA ACATCCATGAAGTTTTTGAGCCAAAAAATTGATAAACTGCTCAAATCAAG GATAAACTCATTTATGAAATATAATACGCATGAAGTTACAGGGTTAAAGC TTCTGTTCAATTAATTTTGAAACGTCCTTTTGTTGTTAGATTCGAAAATA TTCTACATAGGAGTAAGATTGTGTTGATTTTAAATTTAGGATCAAAAATC AAATTCCAGTTTCACAGATTGGTCTCAAAAACAAAAAAATGATGTTATCA ATATAGTATTTTTTATCATCTTTATCGAAGTAATCAGAATTATCATTATT TGACTAGAACTGTATTGCTGTTGCATTACAATAATTTTGCTGATGTTTCT ACTGCAAATCGAATGAGTTAAATTACATAAATTATTCTTTACTAGTTGAT GATGTGGGTTACTTTACGAAGTGAGTTTTGGAATTGCGAATACATTTTAA CAAACAATCCAAATTGATTCAGCTTTGAACATAAAAAGTTAAGTGTTCAG TCTCAAGGACTGATGTGATAGATACTTCTTATTTTTATTCTTCTGTGGAG TGAACCAAGTTTTTGGGACAGGTACTTCATAATATCCTAAGGATATGATT TTAAGAACTCAATATACCTACATACATATAAAGTACGTCAGTGATTGACG TGTTTCCAAAGTTACTTTCATTTTATAGTTTCTTTACGTAAACAGTCAAC TTTTCTTCCCACAGAATGTCCTATTTTTTGGCAATTAAAAAATGTCTGAC TTTGTAGATCAAAATATATATTTAGAAGGTCTTTCAAAATATACCCCTAG AATAGCTTTTAATTTTTTTCTATAAGACACAACGCTAAAAATAGGTGGAA ATGAGCCTCTTAGAAAGGTGTGTCAAACATTCGGCCTTTAAACTATATGT AATTGGGGATACATCGGAGACACTATTATGAAATACTGAACTGTGAATAA GACTTTTTAATAAAACACACTTTAGAGAAAAATAAAAGTACACCATTCTA TTTTTATTTACTGATTTGAGATCCACATTGAGATCCAATAAACTTAAATG AGCTGGACATCCCTGCTTCAAGGGATCATTCATCTCTAGTCTCCGTCCTT CATTTTTAGCATTATGTCCGTAAAAAAATATAATTCACCACAGTTGGCAA GTGGATGAAACCACAAATTTAAAGAAAAAACTAATTTGAAAGACCTACAT ATATACAATATCAGTGTTTTAATATATTAAGTACTTACAATATAAAAAGG TAGACACTATTTTCTGGTCATAAAATAAGTATACATAGGTAAGCTCTTAC TATAATCTAAATTATGTTTTTATATACTGCATTATATATGTAATTCCTTG AATGATTCTAATTAAGCTGAATGAATATGTATTAACTTTACATACTATTC GAGAAATTGTATCCTTTGCTAACCTTGCCAATAAGGTTATCATGCATATA CTTAATTTGTATATACATAGGTATAGTTTTAAACCATAAAGAGATTAAAC TTCACATCAAAGCCTTGATAAATAGTTTTATAACACTTAAAAAGTCTACA TACATAATATGTAACTAATTTCTTCATAATTTGCAAAATACAGCGTTTTA TTACTTATTATCACAGTACATCATGTATGTATTTATGTGCGTACATTGTT TTCAGATAAACGTCAATATCAAAAGGATCGTCAAATTCAAGCAAGAGTCC ATTAATATGGTATATAAATTTATATAATGGCAATAAATTAACTTAACGGT CGTGAACAAATACAGTTCATCTTCATAATTAGCTCCACACAATGATATAA TTGGACATTAATTGATCGGGTTGTATAGCACGAGGTCATTTTGCAATAGT TGCGGTAAATCCCTTTAATAATATGTTCAAATATCTATATAAGAAAGAGA TTTTTACGCATAAAGGAAATGTCATTGAGGTATTTTCAAGTGTATTTCCC TGACGGACTACAACTTATAAAAGGTATGAAAATGTTGTGCACAAACTCTA ACAATTAGATAATACAAATTAAAATACACACCCACCAAAAAAAAAAAAAT GAAATGAAGTTTTAAGTGACTTTTGATCAGACTTATACTAGTTTGAATAC TTGAATAATTTTATCGAGTTCAGTTCAAGTCCTCAGAAATGAAAATATAC TTTGAAGAGTATTTTTAATAATTTTGAGAAAAATAGAGTCAAAGTCAAGT TGTGAGTCGTAGGTTTAGAGTCCAAGTCAAGTATCGAGTCATTGATTCCG AGATTAAATTGAGTGGCAAGTCTCGAGTCCAAGTCTCAACTTCTGAGTAA TAAACATTTTTATTCGTAAAATTAAAACCCATTGGATACAGGTCGTTTGA AAAGTTCGTAGCTTAACATAGTAAAACACGTTTAATTTTAAAATTTGATT TATTTATTCAATGTAATAACTTTTGAGGGGATTTCAACAATTTTAACCAC CATACAATTTTTCAATGCCATTTTTACGGTAAGATTTATCTTTAGTCTCA AAACATGCTTCAGTTTCATGGATTACCTCTGATTTTTTTCCAGCAAGCAT ACTTTTGCTATCTACTAATATGAAAAAGTAACTGGGGCCAGATTTTAAGA ATACGGTATACTTATAAATTCGTAGCCCAATTTTGCCATCGTTTTCAGTG ATTTGTGACACAGTTTTTCATTGTCTTAATGAAACATAACCTTTTTCATC ACTAAATGGAGTTGTTTGTTGCTACTAGTTTTTTTTTCATGGATTGTGAG CTCAGAAACTTTGCACAAAGATTGTACATGTCTAAATATTCATGCACAAT ATGTCAAAAACGTTCATTTGATATCTGTAGTGTCTCCGATATGTCGATCA AACTCATTTAAAGATAATTCAAAGTTATATTATTTTGTCGGTAACAACCT TCTTCGGACTACGTGTATCGTCTTTTACACACATTTCGCCTCGTTTAAAT TTCGAAAACCATTATTCAACGGTTGATTTTGCTGATTCAGAGTCCAAATA ATGTTTATTAAGTCAAGCCTTGGGTTCAACAGTTTTTTCCCTACTAAAAA GAAATGCTTCATTAACAAAAGAAATTCTTTTTTATTCATGTTTTATACAA TAACAAAAGTTTCTCACTACCAATGCTACATCTCGCAAACCAATCATCCG ACAGCTGACAAACTTGTACACCTATCGTTTGAAGGTTAATACTAACTAAA AACCATTTTATTTAATTCTAGTGGATCCATCTATGTATTAGCCTACGAAC TTTTCTGCCGACCTAATATACTGTAG
back to top
Add to Basket