EMLSAT00000001237, EMLSAT00000001237-697084 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001237
Unique NameEMLSAT00000001237-697084
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1201supercontigLSalAtl2s1201:76114..76652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001237 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001237EMLSAG00000001237-684003Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005404EMLSAE00000005404-714332Lepeophtheirus salmonisexon
EMLSAE00000005405EMLSAE00000005405-714333Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771470auto771470Lepeophtheirus salmonispolypeptide
EMLSAP00000001237EMLSAP00000001237Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001237

>EMLSAP00000001237 ID=EMLSAP00000001237|Name=EMLSAP00000001237|organism=Lepeophtheirus salmonis|type=polypeptide|length=159bp
QYEHGTNGWTIGILDGNSFNIVTRNSAPVCPEGINGAYDRDITLDTTFNI
ACHSEKVKVDCCPKVKVSSSSIISKVQGAHLGEYVMKGKHNGYPMYYKQY
RDIESFLFYRKTGLPMDGWMINSDGPRSQHFSITTHSETYCPNEIKTGYN
LXQGRRCHL
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mRNA from alignment at LSalAtl2s1201:76114..76652-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001237-697084 ID=EMLSAT00000001237-697084|Name=EMLSAT00000001237|organism=Lepeophtheirus salmonis|type=mRNA|length=539bp|location=Sequence derived from alignment at LSalAtl2s1201:76114..76652- (Lepeophtheirus salmonis)
CAATACGAACACGGCACAAATGGCTGGACAATTGGAATCCTGGATGGAAA
CTCCTTTAACATTGTCACCCGTAACTCTGCTCCAGTTTGTCCAGAAGGGA
TTAATGGAGCATATGATAGAGATATTACTCTGGATACAACTTTCAACATT
GCTTGTCATTCTGAAAAAGTAAAAGTGGATTGCTGTCCCAAAGTAAAGGT
GTCAAGTTCTTCAATAATTTCAAAGGTTCAAGGTGCTCATTTGGGTGAAT
ATGTCATGAAAGGAAAGCACAATGGCTATCCCATGTATTACAAGCAGTAT
CGTGACATTGAAAGCTTCTTATTCTATAGAAAAACCGGTAAGATAATTAT
TAAAGTTCATTCAAGAGCTTCTTAAGTAAATTTGTCTTGTTTTTAGGATT
ACCAATGGATGGATGGATGATTAACTCTGACGGACCCAGGTCTCAACATT
TTTCCATTACAACACACTCTGAAACGTATTGTCCCAATGAAATAAAAACT
GGGTATAATCTTGNACAAGGACGAAGATGCCACCTTTAA
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