EMLSAT00000001248, EMLSAT00000001248-697095 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001248
Unique NameEMLSAT00000001248-697095
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1202supercontigLSalAtl2s1202:153682..156705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001248 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001248EMLSAG00000001248-684014Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005439EMLSAE00000005439-714367Lepeophtheirus salmonisexon
EMLSAE00000005440EMLSAE00000005440-714368Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773397auto773397Lepeophtheirus salmonispolypeptide
EMLSAP00000001248EMLSAP00000001248Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001248

>EMLSAP00000001248 ID=EMLSAP00000001248|Name=EMLSAP00000001248|organism=Lepeophtheirus salmonis|type=polypeptide|length=934bp
MGESVESVRRQKLINTFRHSKAKIKEWEKEFTLKNRDSQSLGPPKVRTSL
KRKKRGASSSLIGNLHDEENTEEDKEDMKDEEGDSDVFTEIPSSASQLKV
APSSEKSTIALTRRIDGPNTTTITKPQDSEEEEETPQSKRPRLEQDPSPS
TQEVQSSMKDKLLSKKNSWNENYRRINLKKKCFTRFNKGIARKREANANK
SKFRSKGKSYQPSQSKKNLKLPPTSDMSSSIVIPEPLLPVVEIEATSKLR
SMSDEDLDTMVHEALISFGHSEFRRGQKEAIFRILRGEXTLVVLSTGSGK
SLIYQIPAYLLAKEDSRLTIVVSPLVSLMEDQLRNMPTLIQADLFHSDLG
RTQLVKIKDGLRENKLAILFMTPETLFSQLKTLKEFIPRLGFVCIDEAHC
MSQWSHNFRPAYFQLGGAIRESLKATTILGLXATATEKTITTIAERLQVD
SEGGIIKGTVLRKNLLMSVSKDFRRDEALIEMLNSEKFSALGSIIIYCTR
REECERVAAIIRTRRRGENSSKNNIIASSFHAGLSHAKRKRIYNDFISGK
LKIIVATIAFGMGINKSDIRGVVHYNMPSTLESYVQEIGRAGRDENESYC
HLFMDAKGKDLNELKRHVFSNSVDRVIVRKFVGCIFNDKTFTRDKEEYRD
VVLSTFKLIELLDMPEENITTLMCYLENHEKQWIRVGRQISDVVKIQIYG
STDKIRNSVPDHRILDYIILNKTSDTSYRVTEMAKELQVTCEHVWDALAR
LKYAGVTIDYGQPGFHLRVRNDVSENDLDDIQNLLCDKIFQREKNEINKL
ZRTFRTFLNVSHDTWRTCIESFDHGNCDKLNAYINDYFSEQAEETTQVSD
SLSSSTVDEIPIRQQIRQFLSIYSDQSWTGRSIARVFHGIPSPNFPAQTW
YRARGYWKAFMDIDFNAILRLATKEIVGMRTGLS
back to top

mRNA from alignment at LSalAtl2s1202:153682..156705+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001248-697095 ID=EMLSAT00000001248-697095|Name=EMLSAT00000001248|organism=Lepeophtheirus salmonis|type=mRNA|length=3024bp|location=Sequence derived from alignment at LSalAtl2s1202:153682..156705+ (Lepeophtheirus salmonis)
ATGGGGGAATCCGTGGAGAGTGTTCGTCGTCAAAAGCTTATTAATACCTT CCGTCACTCCAAGGCCAAGATCAAAGAGTGGGAAAAAGAATTTACATTGA AGAATAGGGGTGAAAAAGCGTCCTTGCTCAAGGCTCCCAAAGAAATTCAA GTCTGCTATAAAAACTGTAAGAAGATTCAATATTTCCTGGATAAGCCAGA CTTGGRCGTCCAGAATCCTCCTTCCTCCTCARCRAGCACAMGGGGATCTC ATCTGAATGTASCTGCCAATAGAAAGGCCTCCAAGAGGCAAGAAAGCTCT GAGCGTCTGTCTTCGCTTGTTCTTCTAGATTCCCAATCCTTGGGTCCTCC AAAGGTTCGCACATCTCTCAAACGAAAAAAAAGAGGGGCTTCATCATCCT TGATAGGGAATTTACATGATGAAGAAAACACGGAAGAAGACAAGGAGGAC ATGAAGGATGAAGAAGGAGACAGTGATGTATTTACCGAAATCCCCTCCTC CGCGTCTCAGTTAAAAGTGGCTCCTTCATCGGAGAAATCCACAATAGCAT TGACAAGGCGTATAGACGGACCCAACACTACAACCATAACGAAACCCCAA GACTCTGAAGAAGAAGAAGAGACACCCCAAAGTAAAAGACCACGATTGGA GCAAGATCCCTCTCCTTCCACCCAAGAAGTTCAGTCATCTATGAAGGACA AACTTTTATCTAAAAAGAACAGTTGGAATGAGAATTATCGACGAATTAAT TTGAAGAAAAAATGCTTTACGCGTTTCAATAAAGGCATTGCCAGAAAAAG AGAGGCGAATGCGAACAAAAGCAAGTTTAGATCTAAAGGCAAAAGTTATC AACCATCTCAGTCCAAAAAAAATCTCAAGCTTCCCCCTACGAGTGATATG AGTTCCTCCATTGTCATTCCTGAGCCTTTACTGCCTGTTGTAGAAATTGA AGCAACCTCAAAGCTTAGATCTATGTCCGATGAGGATTTGGATACGATGG TTCATGAAGCTCTAATATCCTTTGGTCATTCAGAATTTCGCCGAGGACAA AAAGAGGCTATTTTTCGGATATTAAGGGGAGAGMCAACTCTTGTTGTTTT GTCAACTGGATCTGGAAAGAGTTTGATTTATCAGATACCTGCATATCTTC TTGCTAAAGAAGATTCCCGTCTTACCATTGTTGTTTCACCCCTTGTATCA TTGATGGAAGATCAATTACGAAATATGCCTACTCTGATTCAAGCAGATTT GTTTCATAGTGATCTCGGTAGAACTCAATTGGTAAAAATTAAAGATGGCC TTAGAGAAAATAAATTAGCTATTCTGTTTATGACTCCAGAAACTCTTTTT TCCCAATTGAAAACACTCAAGGAGTTTATTCCTCGTCTAGGCTTTGTCTG TATCGATGAGGCACATTGTATGTCTCAATGGTCGCATAACTTTCGTCCAG CATACTTTCAACTTGGGGGAGCAATTAGGGAGTCATTGAAAGCCACTACT ATTTTAGGACTCKCAGCCACTGCCACAGAGAAAACGATTACTACAATAGC TGAAAGATTGCAAGTTGATTCTGAGGGAGGAATAATCAAGGGAACTGTTT TAAGAAAAAACTTACTCATGTCTGTCTCCAAAGATTTCCGTCGTGATGAA GCTCTTATAGAAATGTTGAATAGTGAAAAATTTAGTGCTCTTGGATCAAT CATAATATACTGTACTCGAAGAGAAGAGTGTGAACGTGTAGCTGCAATTA TTAGAACGAGAAGACGAGGTGAGAATTCCTCCAAGAACAACATAATTGCC TCTTCATTTCATGCGGGATTAAGTCATGCAAAAAGGAAAAGAATATATAA TGACTTCATTTCTGGAAAATTAAAGATTATTGTAGCAACGATTGCTTTTG GAATGGGGATCAACAAGTCGGACATCAGAGGAGTCGTTCATTACAATATG CCTTCAACTCTTGAGAGTTATGTTCAAGAGATAGGAAGAGCTGGTAGAGA CGAGAATGAGTCTTATTGTCACTTATTCATGGACGCCAAAGGCAAAGATC TCAATGAGCTCAAAAGACATGTTTTTTCAAATTCAGTGGATCGAGTCATA GTGAGAAAATTCGTTGGCTGCATATTCAATGACAAGACTTTTACTCGTGA CAAAGAGGAGTACCGGGATGTTGTACTTTCAACGTTTAAGCTCATTGAGC TTTTGGATATGCCTGAAGAAAACATCACAACCCTCATGTGCTATCTTGAA AATCATGAGAAACAATGGATACGGGTCGGGCGTCAAATCAGTGATGTCGT TAAAATTCAAATTTATGGAAGCACTGATAAGATTCGAAATAGCGTACCGG ACCATCGAATTCTAGATTACATTATACTTAATAAAACGTCTGATACTAGC TATCGAGTAACAGAAATGGCCAAAGAACTTCAAGTCACCTGTGAACATGT ATGGGATGCCTTAGCAAGGCTTAAATATGCAGGCGTGACTATAGATTATG GTCAACCAGGATTTCATCTGCGAGTACGGAACGATGTAAGTGAAAACGAC TTGGATGACATTCAAAACTTGCTCTGCGACAAGATATTTCAAAGGGAAAA AAATGAGATAAACAAACTTSAAAGGACTTTTCGTACTTTTCTTAACGTAT CTCATGACACCTGGAGAACTTGCATTGAGTCTTTTGACCATGGTAATTGT GATAAGTTGAACGCTTACATCAATGATTACTTTTCTGAACAGGCTGAGGA GACTACCCAAGTTTCAGATTCCCTTTCTTCTTCCACTGTGGATGAAATAC CAATTAGACAACAGATTCGTCAATTTTTGTCCATTTATTCTGATCAAAGT TGGACTGGAAGATCAATAGCAAGAGTTTTTCACGGTATTCCTAGCCCTAA TTTTCCGGCACAAACATGGTATCGAGCTCGAGGGTATTGGAAAGCTTTTA TGGATATAGACTTTAATGCTATTCTTCGACTTGCTACAAAAGAAATAGTT GGGATGCGTACAGGTTTATCCTGA
back to top
Add to Basket