EMLSAT00000001259, EMLSAT00000001259-697106 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001259
Unique NameEMLSAT00000001259-697106
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1206supercontigLSalAtl2s1206:15499..16283 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001259 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001259EMLSAG00000001259-684025Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005481EMLSAE00000005481-714409Lepeophtheirus salmonisexon
EMLSAE00000005482EMLSAE00000005482-714410Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769206auto769206Lepeophtheirus salmonispolypeptide
EMLSAP00000001259EMLSAP00000001259Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001259

>EMLSAP00000001259 ID=EMLSAP00000001259|Name=EMLSAP00000001259|organism=Lepeophtheirus salmonis|type=polypeptide|length=108bp
MKIMPGFDVSNQHHRMIAAPLDWFKLHDKSIEDLVRTYXLVSYIIVALIV
LIVLCMFYYYQQKIVSALMKGRIRRGKTIGPPYQKMDSQLEDYPNEIIPS
WRFKDLFI
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mRNA from alignment at LSalAtl2s1206:15499..16283+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001259-697106 ID=EMLSAT00000001259-697106|Name=EMLSAT00000001259|organism=Lepeophtheirus salmonis|type=mRNA|length=785bp|location=Sequence derived from alignment at LSalAtl2s1206:15499..16283+ (Lepeophtheirus salmonis)
TTCTGGAGGCACTGTCAGATAGAGTTAATTATTTTCCGCAAAGTTTCATT
CAATAGATAATAATTATTATAACAATTGTTGCGTATGATTATGTCACTTG
CTTTAATGATATAATATTCGAATCACACATACATATCTTACGTGTACATA
ATGCATATAATGGTAGCAAACAAATTAGTTTCTCTCCAGTAACTCACATC
TCCAGTATCCAATCAATTCAAGTTTCATCGAAGATAAATGTGTAAATTTT
TAAATATAAATACAAAATCTTGACCATGAAAATAATGCCTGGATTTGATG
TGTCCAATCAGCATCATCGAATGATTGCTGCGCCTCTAGATTGGTTTAAA
CTTCATGATAAATCTATAGAAGATCTTGTTCGAACTTATMCTCTAGTATC
CTATATTATAGTGGCCTTGATTGTCCTTATTGTATTATGTATGTTTTACT
ATTATCAACAAAAGGTAAGTTTATACAATTAAATAATCTTAGTTAATTAA
AAACATTATATCATTCTAGATAGTTTCGGCACTCATGAAAGGTCGTATAC
GGCGTGGTAAAACGATTGGACCCCCATACCAAAAAATGGATAGTCAATTG
GAGGATTATCCAAATGAGATTATTCCTAGTTGGAGATTTAAAGATTTATT
TATCTAGATATTTATTTCCAGTTGTATTGTTTAGTTTCCATATCATTAGA
CCAAAAAATATATAAATTTTATATCTAAGAATGTATTTAGTTTTTTTATT
ATATCCTATGATTACTTTCGTTTCAATCCCAACTC
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