EMLSAT00000001275, EMLSAT00000001275-697122 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001275
Unique NameEMLSAT00000001275-697122
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s120supercontigLSalAtl2s120:535922..536551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001275 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001275EMLSAG00000001275-684041Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005552EMLSAE00000005552-714480Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778453auto778453Lepeophtheirus salmonispolypeptide
EMLSAP00000001275EMLSAP00000001275Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001275

>EMLSAP00000001275 ID=EMLSAP00000001275|Name=EMLSAP00000001275|organism=Lepeophtheirus salmonis|type=polypeptide|length=209bp
MNHHHMENKVSESSSLPDNLDILSSPGNSSPQKNCSSPTPSKNNFLIQDQ
IFYEFPKGDGIYYTHKVLPDLSEKDVECSNTNDDSKLFFIPDKNKIRTSE
ECREIREKQLHLNSRLSSGDVWYRHYYPEGGWGYIIIFVCLVVSVLNCGL
QLSLCGTVLPIFSESSSSVEDSEEKKGVRTNVINLGRKLIIPYFIYNNII
VPWVLFMKQ
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mRNA from alignment at LSalAtl2s120:535922..536551-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001275-697122 ID=EMLSAT00000001275-697122|Name=EMLSAT00000001275|organism=Lepeophtheirus salmonis|type=mRNA|length=630bp|location=Sequence derived from alignment at LSalAtl2s120:535922..536551- (Lepeophtheirus salmonis)
ATGAATCATCATCACATGGAGAATAAAGTGTCTGAGAGTTCATCCCTTCC
CGATAATCTCGATATTCTCTCTTCTCCCGGGAATTCCTCTCCTCAAAAAA
ATTGTTCCTCTCCCACTCCTTCAAAAAATAATTTCCTTATTCAAGATCAA
ATATTTTACGAGTTTCCAAAGGGGGATGGGATCTACTATACGCATAAAGT
CCTTCCAGATCTCTCCGAAAAGGATGTGGAATGCTCGAATACGAATGATG
ACAGTAAATTATTCTTTATTCCAGACAAGAATAAGATTCGAACAAGTGAG
GAGTGTCGGGAGATACGAGAGAAACAGTTGCATTTGAACTCTCGACTATC
ATCTGGGGATGTTTGGTATCGGCACTATTATCCAGAGGGCGGCTGGGGCT
ATATCATTATTTTTGTGTGTTTGGTCGTGAGTGTACTTAATTGTGGATTA
CAGCTGAGTTTGTGTGGCACGGTTTTACCTATTTTTTCCGAATCATCATC
CTCAGTGGAAGACTCCGAGGAGAAGAAGGGAGTTCGAACCAACGTCATTA
ATCTCGGTAGGAAATTAATTATTCCTTATTTTATTTATAACAACATTATT
GTTCCTTGGGTTCTATTCATGAAGCAATAA
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