EMLSAT00000001298, EMLSAT00000001298-697145 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001298
Unique NameEMLSAT00000001298-697145
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1214supercontigLSalAtl2s1214:8142..9442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001298 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001298EMLSAG00000001298-684064Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005692EMLSAE00000005692-714620Lepeophtheirus salmonisexon
EMLSAE00000005693EMLSAE00000005693-714621Lepeophtheirus salmonisexon
EMLSAE00000005694EMLSAE00000005694-714622Lepeophtheirus salmonisexon
EMLSAE00000005695EMLSAE00000005695-714623Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768776auto768776Lepeophtheirus salmonispolypeptide
EMLSAP00000001298EMLSAP00000001298Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001298

>EMLSAP00000001298 ID=EMLSAP00000001298|Name=EMLSAP00000001298|organism=Lepeophtheirus salmonis|type=polypeptide|length=348bp
MSIFTFLGIFGVLLCISIGNEASSNFQRLVKREEESVGVKITQLESWELP
DEYVDNANKKEIKRFSLEMDKITLEVMSLDLVITSLKLPDDNASMSDVVL
GFDDVEGYMKNPAFSGVFISLSPDDMDHKSKPLRNWVSTHMKDKLVFSLI
KDEEVMVNAEFLLDAEGKLHITFQSLVSQPSFMDISLKQYFNLAGHASGI
SGLNEQIIQVNAAEVSETPEGNSFVDIDGNDLDLRIPQNIGFLISNENIT
LGRRFVIDRSLAIYDRFVTRISHGISRRFVEVYSNQPSFYFDVFNKTTSF
GKGSEEYEAKSGVEISTGTLFDEKELSIVIPGDVYKHIVVYRFGVDEF
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mRNA from alignment at LSalAtl2s1214:8142..9442-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001298-697145 ID=EMLSAT00000001298-697145|Name=EMLSAT00000001298|organism=Lepeophtheirus salmonis|type=mRNA|length=1301bp|location=Sequence derived from alignment at LSalAtl2s1214:8142..9442- (Lepeophtheirus salmonis)
AATATTACATCTTCCTCCTGTCGACATTCGTCTTTTGAACTCTTTTTTTA
CCGATCCATCAGTTTATTAGGAGTAATAATGTCTATATTTACCTTCCTTG
GTATTTTTGGTGTACTCCTTTGTATAAGTATTGGAAATGAAGCATCTTCT
AACTTTCAACGATTGGTAAAGCGAGAAGAAGAAAGTGTTGGAGTTAAAAT
TACTCAATTGGAGTCTTGGGAACTTCCTGATGAATATGTTGACAGTACTA
CAACTTGAATATACATATAATAAATATATATATTCTAATATTATTTCTTC
CTTAGATGCTAATAAGAAGGAAATTAAAAGGTTTTCCTTGGAAATGGATA
AAATCACTTTGGAAGTCATGAGTCTGGATCTTGTTATTACATCATTAAAA
GTAAGTACATTCCGCCATACAATGTGTTATGATCCTATTCCTTTCATCTA
CTCTTTCTCAGTTACCTGATGACAATGCTTCCATGAGTGATGTGGTTTTG
GGCTTTGACGACGTTGAAGGATATATGAAAAATCCCGCCTTTTCAGGAGT
CTTTATATCTCTTTCTCCCGATGACATGGATCACAAATCAAAGCCACTCC
GCAACTGGGTTTCCACTCACATGAAGGATAAGCTCGTTTTCAGTCTTATA
AAGGATGAAGAGGTCATGGTAAATGCTGAATTTTTGCTGGATGCCGAAGG
AAAACTCCATATTACTTTCCAAAGTCTTGTTTCCCAGCCTTCTTTCATGG
ATATTTCTTTAAAGCAGTACTTTAATTTGGCGGGTCATGCCTCTGGAATC
TCAGGATTAAATGAGCAAATAATTCAAGTCAATGCTGCTGAAGTATCCGA
AACACCCGAGGGCAATAGTTTCGTTGATATTGACGGAAACGATTTGGATC
TTAGAATCCCTCAAAACATTGGATTCCTCATTTCGAATGAAAACATCACA
CTTGGTCGTCGATTCGTCATAGATCGTTCCCTTGCTATTTATGACCGATT
CGTGACTCGTATCTCGCACGGAATCTCGCGTAGATTTGTAGAGGTTTATT
CAAATCAGCCAAGTAATGTTTTCATTTATTTAAATTTTCCCGCATAGATA
CTAATGCATCCTCTAGGTTTTTACTTTGACGTTTTCAACAAGACGACTAG
CTTTGGAAAAGGATCAGAGGAATACGAAGCTAAAAGTGGAGTTGAAATCT
CTACAGGAACTCTCTTTGATGAGAAGGAGCTCTCAATTGTGATCCCTGGA
GATGTCTACAAGCACATAGTTGTGTATAGATTTGGAGTTGATGAATTCTA
A
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