EMLSAT00000001310, EMLSAT00000001310-697157 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001310
Unique NameEMLSAT00000001310-697157
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1219supercontigLSalAtl2s1219:26590..28273 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001310 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001310EMLSAG00000001310-684076Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005745EMLSAE00000005745-714673Lepeophtheirus salmonisexon
EMLSAE00000005746EMLSAE00000005746-714674Lepeophtheirus salmonisexon
EMLSAE00000005747EMLSAE00000005747-714675Lepeophtheirus salmonisexon
EMLSAE00000005748EMLSAE00000005748-714676Lepeophtheirus salmonisexon
EMLSAE00000005749EMLSAE00000005749-714677Lepeophtheirus salmonisexon
EMLSAE00000005750EMLSAE00000005750-714678Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769734auto769734Lepeophtheirus salmonispolypeptide
EMLSAP00000001310EMLSAP00000001310Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001310

>EMLSAP00000001310 ID=EMLSAP00000001310|Name=EMLSAP00000001310|organism=Lepeophtheirus salmonis|type=polypeptide|length=237bp
MNIWIASICIFALATSVSTQSCQTASGACVFPFKYLGVTYSACTLQDSAI
PWCATSVDGATNYASYDYCPASCAPCQTVDGVSCVFPFVYQSTSYSNCTN
ADFGSTFWCATAVGAGNVYTSYGTCSAECLSSSSGSTACKTTSGVSCVFP
FTYNNVEYASCTLVESSFPWCATSVNNGEYNGSYGYCEASCEVGATVQTT
TTTXXXXTTTTTTSTTTNPKASFTKTTTVSTKIGSKG
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mRNA from alignment at LSalAtl2s1219:26590..28273+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001310-697157 ID=EMLSAT00000001310-697157|Name=EMLSAT00000001310|organism=Lepeophtheirus salmonis|type=mRNA|length=1684bp|location=Sequence derived from alignment at LSalAtl2s1219:26590..28273+ (Lepeophtheirus salmonis)
CTACAAAAAATCATTTAATATCTAATTCTTTAGGACTCAACATCAAAATG AACATTTGGATTGCTTCAATTTGTATTTTTGCGCTAGCAACTTCTGTGTG TAAGTTAATAAATACTCGTTGTTTAAAACTGACAAATATTCCCATATCGT TTGTGAATTAAAGTATAATTTTCAAAAAATGAGTATTCAAATTGTAATAC CTTTTAGCTACTCAGTCGTGTCAGACTGCTAGTGGAGCCTGTGTCTTTCC ATTCAAATATTTAGGAGTAACGTACAGTGCATGTACTCTCCAGGATTCGG CTATACCTTGGTGTGCTACCTCAGTAGATGGAGCCACAAATTATGCAAGC TACGATTATTGCCCTGCAAGTTGTGCACGTAAGTTAAAAGAACAATACTC TGTAAAATATTTGTATTTTATACTCAACTGTGCTTACAGAATCTCCAACA ACAACAAAATCCGGTGGTGAGTTAAGACTTTTATATGTATGTAGGGTAGA CCGAAAAAAACAATTGCAACAGTCCTTTTTCTCGAACATCACAATTTTAC ATTATAATAAAACCATTGTGAAAAAAAAGTATATCATTTCTAAAAAAAAT TCCATGAGAATTTGGATAAAAATGATTGAAAAGGGTAACAGTCATTTTTG AAAGGAAAAAAAACATTTTCATAATGTAGTCAGTTTTTTATCGTATTCTA CAAACTTTTGATCATTTGGTTATTAGTTGATAAATGTATATTATTCCATA TTCATTGAGGATACACTTTTGCGGGTCTAAATCAAACTAACTCTTAGTAA ATGGGACAAAACTAATAAATTCCCTGGTCCCCTTAATTATGTCTTTAATC AACATAGTTGTATGTATCTCTTTCATTTTCAGCATGCCAAACAGTTGATG GAGTTAGCTGTGTATTTCCTTTTGTGTACCAAAGTACATCATACAGTAAT TGTACAAATGCAGATTTTGGATCCACGTTTTGGTGTGCCACTGCTGTTGG GGCTGGAAATGTTTACACCTCCTACGGAACCTGTTCCGCAGAATGTCTAT GTAAGTTCAACCTTTGCGCGCTAAATCTACACATTTTACATTTTAAGTCA AATCACTTATTTACTCAACATTCTTTTTGTTCCTATAGCTAGTAGCTCGG GCAGCACTGGTAATAACATAAATACTACTCTAAAAAAGGACTAAGTACAT TTATTATTTTTATGTTTAGCTTGTAAGACAACTTCTGGTGTCAGCTGTGT GTTTCCCTTTACTTACAACAACGTTGAATATGCATCCTGTACTTTAGTGG AGAGTTCTTTTCCTTGGTGTGCGACGTCTGTCAACAATGGGGAATACAAT GGTAGTTATGGATATTGTGAAGCTAGTTGTGAAGGTTTGTCATAAATTTT TTTATCTACACAAATGTTAAATTATATCTTGATTCATTCATCCATTTTTA GTGGGAGCAACAGTACAGACGACTACAACCACAKCGKCCKCTKCAACCAC AACAACCACAACAAGTACCACTACCAACCCAAAGGCATCATTTACTAAAA CGACCACAGTATCAACAAAAATTGGTTCAAAAGGTTAAACACCCAGTGAT ATTTTATCATTCTGAATGTATTTTGATATGTTTATGTATAATAAAGCCCA AAATGGGACTAGTTGTTTCTAAATTACATCTTAA
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