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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
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Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
Publication |
|
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NAC 140114 |
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both |
-Missing-
-Missing- |
14.01.2014 - 15:00
21.01.2014 - 11:30 |
Molecular characterisation and functional... more |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1223 | supercontig | LSalAtl2s1223:101928..105095 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001317 >EMLSAP00000001317 ID=EMLSAP00000001317|Name=EMLSAP00000001317|organism=Lepeophtheirus salmonis|type=polypeptide|length=1055bp
MRLLLISCLFLAVIGLSLSERPIKLRLSSSATRRQSSSSSSSIVGDSEPL
TRSTRQLASLRTRKRIRRPPRLNDDEDEDVSEGQESRDVFSSRFAPSRGS
PRREDDDDDDEEDKKPVRSRSRGGGSAFRSRGGRPSLSSKSSSRSSLAPK
LTAPNDDGYKIVCYYTNWSQYRPKIGQFLPEDIDPHICTHVIFAFGWIKN
GKLTSFETNDVSTDGKIGLYDRVVGLKSKNPKLKVILAIGGWSFGTSKFK
KMAETRFSRQTFIFSAISFLRKHDFDGLDIDWEYPKRPDKENFVALLKEL
RQAFEYEHEETKNDRLILSAAVPVGPDNVRGGYDVPAVSKWLDFFNLMAY
DFHGKWEKQAGHNAPLYAPSSDSEWRKQLSVSFAAQMWTKLGAPKNKMVI
GMPTYGRSFTLASKRNYIVNSPSKDGGKTGEYTREAGFLAYYEICEMLLK
GANYIWDDEXPYLVKGDQWVGFDDERSIRHKMNWIKTSGFAGAMVWSIDM
DDFNGTICGSGVKYPLVGAIREELMGVPRDTVAPGIEPDDIDWETVAPNR
LTPYVPEEDPQRIDIADLLGQVSKGNKKNRLPALLQNANTLPENLREPQI
FCYFTNWSYKRPGMGKFTPEDLDPKLCTHIVFAFATISNNKLTASEDRDI
GDAFTEGTYDRIMLLKEQNPDLQILLALGGWSFGSEPFRKITENIFRMNG
FVYDSIEFLRRYNFDGLDIDWEYPENEDDKAAFVNLIKELRLAFEGEHKS
AKKPKLLLTAAVPANYKAISAGYDVPELSKYLDFLNVMTYDFHGQWENEV
GHNSPLFPLNSASNKEKKLTVDYAVKEWVRKGAPLEKINVGMPVYGRTFK
LKDNAKFDIGAEAVSGGDAGRYTGEEGFLSYYEICDFLHQDNTTLVWDNE
QQVPFAYRGDQWVGFDDERSLRTKVDWLKTEGFGGIMIWSVDLXDFRGYC
GTGKFPLIKAMKKELQDYAVELKYEGPYETPRAGEEPEEEKQVCDEDEGH
VSFHRDKNDCKMYFVCQGTVQHHKTCPSGLVFNENENVCDWPSAVEECAH
LLPEK back to topmRNA from alignment at LSalAtl2s1223:101928..105095+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001317-697164 ID=EMLSAT00000001317-697164|Name=EMLSAT00000001317|organism=Lepeophtheirus salmonis|type=mRNA|length=3168bp|location=Sequence derived from alignment at LSalAtl2s1223:101928..105095+ (Lepeophtheirus salmonis)
ATGAGGTTACTTCTCATTTCCTGCTTGTTTTTAGCAGTAATAGGACTGTC
ACTCTCTGAGCGACCCATTAAGCTCAGATTATCTTCCAGTGCTACAAGAA
GGCAGAGCAGTAGTAGTTCCAGCAGCATCGTGGGGGATAGCGAACCCCTC
ACACGTAGTACACGCCAACTTGCCTCTCTCCGAACAAGAAAAAGGATCCG
TCGTCCTCCAAGGCTCAACGACGATGAGGATGAGGATGTCTCAGAAGGTC
AAGAGTCTCGTGATGTTTTCTCTTCAAGATTTGCTCCATCTCGAGGAAGT
CCTCGCCGTGAGGACGATGATGATGATGATGAGGAAGATAAGAAACCTGT
GAGGTCCAGGTCTCGTGGAGGAGGAAGTGCATTCAGAAGTCGAGGAGGAC
GGCCTTCCCTCTCTTCAAAAAGCTCATCCCGAAGTTCCCTTGCTCCAAAG
TTAACAGCTCCAAATGATGACGGATATAAAATCGTTTGCTACTACACAAA
TTGGTCACAGTACAGACCCAAAATTGGACAGTTCTTGCCTGAAGACATTG
ATCCTCATATTTGCACTCACGTGATCTTTGCCTTTGGTTGGATCAAGAAT
GGCAAGTTAACTTCCTTTGAAACAAATGACGTTAGTACAGACGGAAAGAT
CGGTCTCTATGATCGTGTTGTGGGACTCAAGTCCAAAAATCCTAAGCTCA
AAGTTATTTTAGCTATTGGAGGATGGAGTTTTGGTACTTCTAAGTTTAAA
AAAATGGCGGAAACCCGATTTTCCAGGCAAACATTCATTTTCTCTGCCAT
TAGTTTCCTTCGTAAACATGATTTTGATGGACTTGATATTGATTGGGAGT
ATCCAAAGAGACCCGACAAGGAAAATTTCGTTGCTCTTCTTAAGGAACTT
CGACAGGCTTTTGAATATGAGCATGAAGAAACTAAGAACGATCGTCTCAT
ACTCTCAGCTGCAGTACCTGTAGGCCCTGATAATGTGAGAGGTGGATATG
ATGTTCCCGCAGTGAGCAAATGGCTTGATTTCTTTAATTTGATGGCCTAT
GATTTCCATGGTAAATGGGAAAAGCAGGCGGGTCACAATGCTCCTCTCTA
TGCTCCAAGCTCAGATTCTGAATGGAGAAAACAACTCTCTGTCAGTTTTG
CTGCTCAAATGTGGACAAAGTTAGGTGCTCCCAAAAACAAAATGGTCATC
GGAATGCCTACTTATGGACGTTCTTTCACTCTTGCCAGCAAACGCAATTA
TATTGTCAATTCACCTTCAAAGGATGGAGGCAAAACAGGAGAGTATACTC
GTGAAGCCGGATTCTTGGCCTACTATGAAATCTGTGAAATGCTTCTTAAG
GGTGCCAATTATATTTGGGATGATGAAANTCCCTACTTGGTGAAGGGAGA
TCAATGGGTTGGATTTGATGACGAACGCTCTATTCGACACAAAATGAATT
GGATCAAGACAAGTGGCTTTGCAGGAGCCATGGTATGGTCCATTGACATG
GATGACTTCAATGGAACTATTTGTGGATCTGGTGTAAAATATCCTCTTGT
TGGAGCTATTCGTGAAGAACTAATGGGAGTACCCAGGGATACAGTTGCAC
CAGGAATTGAGCCTGATGACATTGATTGGGAAACTGTTGCTCCAAATCGA
CTCACACCATACGTTCCAGAAGAGGATCCTCAAAGAATTGACATTGCTGA
CTTGTTGGGACAAGTGTCTAAAGGAAACAAGAAGAACAGACTGCCTGCAC
TTCTTCAAAATGCCAATACCCTTCCTGAAAATCTTCGTGAGCCCCAAATA
TTTTGCTACTTCACTAACTGGAGCTACAAGAGACCTGGAATGGGCAAATT
CACTCCCGAAGATTTGGATCCCAAACTCTGCACGCATATCGTATTTGCCT
TTGCTACCATATCAAACAACAAATTGACAGCATCAGAGGATCGAGACATT
GGAGATGCATTCACTGAAGGAACCTATGATCGTATCATGCTCCTTAAAGA
ACAAAATCCAGATTTGCAAATCTTACTTGCCCTTGGAGGATGGTCCTTTG
GCTCTGAGCCCTTCCGTAAGATCACAGAGAATATTTTTAGAATGAATGGA
TTCGTATATGACTCCATTGAGTTCCTTCGTCGTTATAACTTTGACGGGTT
GGACATTGACTGGGAGTATCCTGAAAATGAGGATGACAAGGCTGCTTTTG
TTAATTTAATCAAAGAACTTCGTCTTGCATTTGAGGGTGAGCATAAATCT
GCCAAAAAGCCAAAACTTCTTCTCACAGCTGCTGTACCTGCCAACTACAA
AGCCATCTCTGCGGGCTATGATGTCCCAGAGCTCTCCAAGTACCTTGATT
TCCTTAATGTGATGACGTATGACTTCCACGGTCAATGGGAGAATGAAGTG
GGACACAACTCCCCACTCTTTCCTTTGAATTCTGCCTCTAATAAAGAAAA
GAAGCTGACGGTGGACTATGCTGTAAAGGAATGGGTTCGTAAAGGCGCTC
CACTTGAAAAAATTAACGTGGGAATGCCGGTTTATGGTCGGACCTTCAAG
CTTAAGGACAATGCCAAGTTTGACATAGGTGCAGAGGCCGTTTCTGGAGG
AGATGCAGGTCGCTACACGGGAGAAGAGGGATTCCTTTCCTACTATGAAA
TCTGCGATTTCCTACATCAAGACAACACAACCCTCGTTTGGGACAATGAG
CAACAAGTTCCTTTCGCCTATCGTGGAGATCAATGGGTGGGCTTTGATGA
CGAACGATCTCTACGTACCAAAGTCGACTGGCTCAAAACAGAGGGCTTTG
GGGGTATCATGATCTGGTCAGTGGATTTGGKCGACTTCCGTGGCTATTGT
GGAACTGGAAAATTCCCTCTTATCAAAGCCATGAAGAAAGAACTCCAAGA
CTACGCCGTGGAACTCAAATATGAAGGACCTTATGAAACTCCCCGTGCAG
GAGAAGAGCCAGAAGAGGAAAAACAAGTTTGTGACGAGGATGAGGGTCAT
GTCAGCTTCCACAGAGATAAAAATGACTGTAAAATGTACTTTGTGTGTCA
AGGAACGGTTCAACATCACAAGACTTGTCCCTCCGGACTAGTCTTTAACG
AAAATGAAAATGTTTGTGATTGGCCTTCCGCTGTCGAAGAATGTGCGCAT
CTTCTGCCAGAGAAATAA back to top
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