EMLSAT00000001327, EMLSAT00000001327-697174 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001327
Unique NameEMLSAT00000001327-697174
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1223supercontigLSalAtl2s1223:219743..221280 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001327 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001327EMLSAG00000001327-684093Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005795EMLSAE00000005795-714723Lepeophtheirus salmonisexon
EMLSAE00000005796EMLSAE00000005796-714724Lepeophtheirus salmonisexon
EMLSAE00000005797EMLSAE00000005797-714725Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774746auto774746Lepeophtheirus salmonispolypeptide
EMLSAP00000001327EMLSAP00000001327Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001327

>EMLSAP00000001327 ID=EMLSAP00000001327|Name=EMLSAP00000001327|organism=Lepeophtheirus salmonis|type=polypeptide|length=128bp
SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQW
CYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGC
FPQVFDTKINVKSAFKPSKXPSSDPNSP
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mRNA from alignment at LSalAtl2s1223:219743..221280+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001327-697174 ID=EMLSAT00000001327-697174|Name=EMLSAT00000001327|organism=Lepeophtheirus salmonis|type=mRNA|length=1538bp|location=Sequence derived from alignment at LSalAtl2s1223:219743..221280+ (Lepeophtheirus salmonis)
AGCCTCTCCGAGGCTCAAACAGTCCTCAAGGCTGCAGCACCAGCAAATAA
CGTACGAGACTGCTTTTGTCAATGTTCCAGTCTTAGTTTCAGGGATAAGA
ATAATCGTGTGAATGGAAACTGCAGAACGTGAGTTTATAAATATCCATTC
CATCATATTATAATTGATTTTTATATAAGTAATGAGTTTTTCATTAAGAG
CGCTTCAACTCTTATATAAATAAAACACAAACGGTTACAAATTTTACCAA
ATTTATTTTTTCAGTACAAATTGTAGACATATTGATTTGTTGATTTGTTT
GATGTGACCATAACGAGCACGTTTACAGAAGTCCAATCGTTGAACCCCTT
TTTTCCATTACTTTTTCTAATAAATTGATCGATATTGTAGCAATTTGACG
TTCGATATTTTCTCTGAGCTCTTCTGACGTCGCCAGATTATTAGTGTAGA
CTAATGACTTCCAAGGCCCAAAAGAAAATAATACAAAGGCGTTAAATCGC
ACGAGCGAGCTGGTCAATCAGCTGGTCATTTCTCGAAATAACACGCTCAT
CAAATTTGCTTTGCAATAAATCAATCGTAAAGTTTGCTGTTGACAAAGTG
GCACCGTCTTGTTGAAGCTACATGTCTCCCAAGTCCATTCCTTCCAATTG
GGGCAAAAGAAAAATCAGTTATCCTGGTATGATAGTGATTTCCATTTACA
GTAACGTGGCTATTATCATCATGAAGGAAAAAATATGGCCGAATGATTCC
TCCAGCATGAAGTTTACTGCAAACAGTAATTTTTTCGAGATGCAATGATA
TCTCGTGAATCCCTTGTGGATTGCTTTTTGACCAATAATGCATTTTTTGC
TTATTAACAAAGCCATTAACCCAAAAATGAATTTCATCACTCAAGATGAA
TTTATGTTCTTAATATTGCGACAATTTAACAGTCATTTTGATAATAAATT
TGGATAATTTGCAATCACTGATAGAGTGTATATTGTTCCATGATTAAAGG
TATACCAATGAAGTTCCTAAATTTACTTTCTAAATTACATATGGCATCTT
TTTCCCCCTAACGGGGAAAAAATGAAGCATCGGTTATGAAAAACCATTTA
AGACTTAACTAATTTATATTATTTATCCTTTTTAGAACATTCAATGGAGG
ACAATGGTGTTATATTACAGATGAGGCCGCTCGTAATGGAGATTGCCCAG
ATTCTAATCCTTCCACCCGATTCCCTGGAAAAAAATGGTCATACTTCTCT
TGTGCTACTCCAAGTACCCGTCAATGTGTCTTGGATGCAGTGGTAAGTTT
TTATCTGATTAAATGTAATTATTTAACCTATTATTATGGATTATTTTTTA
TAATAGAGAAATGGAGGCTGCTTCCCTCAAGTTTTTGATACAAAAATAAA
CGTCAAATCCGCCTTCAAGCCATCTAAAMCTCCATCATCCGATCCTAACT
CTCCTTAAAAATATATCCCTACCTGAAATTGTACCTTCAAATTATAGATA
TATTATATATATATAGATAAATAAAAATTATAGCGACA
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