EMLSAG00000001327, EMLSAG00000001327-684093 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000001327
Unique Name	EMLSAG00000001327-684093
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592848675|gb|GAXK01108869.1| (TSA: Calanus finmarchicus comp296545_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 75.485 bits (184), Expect = 1.243e-16
Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0

Query:   10 KAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQC 90
            KAA+P  N   C CQCSSL+F+DK  R+ GNC +    G +WCY+  ++A +  C D + S RFP   WSY +CATP   QC
Sbjct:  196 KAASPYTN---CDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYV--DSAHHSSCQDLHHSARFPQNPWSYEACATPDRHQC 426

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932367|gb|GAXK01026186.1| (TSA: Calanus finmarchicus comp18158_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 1.922e-16
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNC-RTTFNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            S+    T  KAA+P  N   C CQCS+L+F+DK    +GNC R    G QWCY+     R G C D S  STRFPGK WSY +CATP+
Sbjct:  205 SVKTTDTNTKAASPYTN---CGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVD---PRQGSCQDLSYTSTRFPGKPWSYEACATPA 450

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932369|gb|GAXK01026184.1| (TSA: Calanus finmarchicus comp18158_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 2.086e-16
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNC-RTTFNGGQWCYITDEAARNGDCPD-SNPSTRFPGKKWSYFSCATPS 86
            S+    T  KAA+P  N   C CQCS+L+F+DK    +GNC R    G QWCY+     R G C D S  STRFPGK WSY +CATP+
Sbjct:  205 SVKTTDTNTKAASPYTN---CGCQCSNLTFKDKYGNTHGNCKRVDHTGAQWCYVD---PRQGSCQDLSYTSTRFPGKPWSYEACATPA 450

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592848676|gb|GAXK01108868.1| (TSA: Calanus finmarchicus comp296545_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 3.176e-16
Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0

Query:   10 KAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQC 90
            KAA+P  N   C CQCSSL+F+DK  R+ GNC +    G +WCY+  ++A +  C D + S RFP   WSY +CATP   QC
Sbjct:  124 KAASPYTN---CDCQCSSLNFQDKYGRIQGNCNSADHTGARWCYV--DSAHHSSCQDLHHSVRFPNNPWSYEACATPDRHQC 354

HSP 2 Score: 74.3294 bits (181), Expect = 6.435e-16
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 0

Query:   10 KAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQC 90
            KAA+P  N   C CQCSSL+F+DK  R+ GNC +    G +WCY+  ++A +  C D   S RFP   WSY +CATP   QC
Sbjct:  512 KAASPYTN---CDCQCSSLTFQDKYGRIQGNCNSADHTGARWCYV--DSAHHSSCQDLQHSARFPQNPWSYEACATPDRHQC 742

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932379|gb|GAXK01026174.1| (TSA: Calanus finmarchicus comp18158_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 74.3294 bits (181), Expect = 3.383e-16
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0

Query:   10 KAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            KAA+P  N   C CQCSSL+FRD +  V GNC+T    G QWCY+   ++    C D  PS RFP   WSY +CATP
Sbjct:  109 KAASPFTN---CGCQCSSLTFRDTSGTVQGNCKTVDGTGAQWCYVDSSSSS---CQDLVPSERFPHNPWSYEACATP 321

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592906544|gb|GAXK01051831.1| (TSA: Calanus finmarchicus comp28981_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 7.286e-16
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0

Query:    7 TVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQ 103
            TV KAA+P  N+    CQCSSL+F D +  + GNC++    G QWCY+      +  C D   S RFP   WSY +CATP+  Q V          P 
Sbjct:  329 TVEKAASPYTNIG---CQCSSLTFIDSSGHIQGNCKSVDHTGAQWCYVDH---LHSSCQDLVHSARFPNNPWSYEACATPAVYQPVQAPYHQPAHLPH 604

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932381|gb|GAXK01026172.1| (TSA: Calanus finmarchicus comp18158_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 74.3294 bits (181), Expect = 8.286e-16
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
            S + ++T+ KA++P  N   C CQCSSL+FRD  N + GNC+T    G QWCY+    + +  C D  PS RFP   WSY +CATP+
Sbjct:   79 STTYSKTLNKASSPYTN---CGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVD---SSHSSCQDLVPSQRFPHNPWSYEACATPA 321

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932378|gb|GAXK01026175.1| (TSA: Calanus finmarchicus comp18158_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 71.2478 bits (173), Expect = 1.061e-15
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCAT 84
            S + ++T+ KA++P  N   C CQCSSL+FRD  N + GNC+T    G QWCY+    + +  C D  PS RFP   WSY +CAT
Sbjct:   79 STTYSKTLNKASSPYTN---CGCQCSSLTFRDSANIIQGNCKTVDSTGAQWCYVD---SSHSSCQDLVPSQRFPHNPWSYEACAT 315

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592932380|gb|GAXK01026173.1| (TSA: Calanus finmarchicus comp18158_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 71.633 bits (174), Expect = 3.749e-15
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0

Query:   15 ANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            A++  +C CQCS+LSFRD +  V GNC+T    G QWCY+   ++    C D  PS RFP   WSY +CATP
Sbjct:  178 ASSFTNCGCQCSNLSFRDTSGIVQGNCKTVDGTGAQWCYVDSSSSS---CQDLVPSERFPHNPWSYEACATP 384

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BLAST of EMLSAG00000001327 vs. C. finmarchicus
Match: gi|592953585|gb|GAXK01004968.1| (TSA: Calanus finmarchicus comp348412_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 69.3218 bits (168), Expect = 1.077e-14
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0

Query:   15 ANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFN-GGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP--STRQC 90
            A+   +C CQCSSL+FRD+  +V+GNC++  + G QWCYI+  +     C D   S +FP   WSY +CATP  S+ +C
Sbjct:  131 ASTYVNCGCQCSSLTFRDEYGKVHGNCKSVDDKGAQWCYIS--STHYSSCEDLQLSAKFPNNPWSYTACATPDLSSYEC 361

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001327 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:219743:221280:1 gene:EMLSAG00000001327 transcript:EMLSAT00000001327 description:"maker-LSalAtl2s1223-augustus-gene-2.67")

HSP 1 Score: 258.455 bits (659), Expect = 1.530e-89
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP 128
            SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP
Sbjct:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSDPNSP 128

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000005911 (pep:novel supercontig:LSalAtl2s:LSalAtl2s31:1336906:1338922:-1 gene:EMLSAG00000005911 transcript:EMLSAT00000005911 description:"maker-LSalAtl2s31-augustus-gene-12.7")

HSP 1 Score: 168.703 bits (426), Expect = 6.132e-54
Identity = 84/131 (64.12%), Postives = 103/131 (78.63%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPAN-NVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQV--FDTKINVKSAFKPSKXPSSDPNSP 128
            S SEAQTVLKAAAPA+ ++ DCFCQCSSL+FRD+NNRVNGNCRTTF G QWCYITDEAARNGDCPD+ PS R PGK+WS+FSCATP+ RQCV + + + GC        T+IN+KS+   +    +DP++P
Sbjct:   18 SKSEAQTVLKAAAPASTSINDCFCQCSSLTFRDRNNRVNGNCRTTFQGAQWCYITDEAARNGDCPDAQPSRRQPGKQWSFFSCATPTVRQCVNNFLSSAGCNVAFGGIGTRINLKSSSPQASSIDNDPDAP 148

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000858 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:143094:143555:-1 gene:EMLSAG00000000858 transcript:EMLSAT00000000858 description:"maker-LSalAtl2s1146-augustus-gene-0.4")

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-18
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0

Query:   20 DCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
            DC CQC SL FRD   +++GNC++T NG QWCY+  +  +   CPD   S RF G+ WS  +CATPS
Sbjct:   37 DCNCQCISLQFRDSKGKIHGNCKSTLNGAQWCYVKYD--KYSPCPDLGRSQRFSGRYWSNHACATPS 101

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:57010:58418:-1 gene:EMLSAG00000000366 transcript:EMLSAT00000000366 description:"snap-LSalAtl2s1053-processed-gene-0.45")

HSP 1 Score: 72.0182 bits (175), Expect = 7.155e-17
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0

Query:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCAT 84
            A AP N+  DC CQC +LSF D+  +  GNCR+TFNG QWCY+ ++   +  CP    STR+ GK +S  +C T
Sbjct:   23 APAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGXSS--CPXLKRSTRYRGKYYSNHACIT 94

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001837 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:72145:72812:1 gene:EMLSAG00000001837 transcript:EMLSAT00000001837 description:"maker-LSalAtl2s1318-augustus-gene-0.12")

HSP 1 Score: 70.8626 bits (172), Expect = 2.060e-16
Identity = 34/68 (50.00%), Postives = 40/68 (58.82%), Query Frame = 0

Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPS 86
             DC CQC SL FRD      GNC +T NG QWCY+  +  R   CPD   S RF G+ WS  +CATP+
Sbjct:   36 EDCNCQCMSLKFRDSRGTTYGNCESTINGAQWCYVKYD--RFSPCPDLQSSRRFNGRYWSNHACATPA 101

[Close]

BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000001834 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:34086:34563:-1 gene:EMLSAG00000001834 transcript:EMLSAT00000001834 description:"maker-LSalAtl2s1318-augustus-gene-0.14")

HSP 1 Score: 67.3958 bits (163), Expect = 3.704e-15
Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 0

Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCVLDAVRNGGCFPQVFDTKINVKSAFKPSKXPSSD 124
            C CQC SL FRD   R  GNCR+T NG QWCY+  +      CPD   S RF G+ WS  + ATP+    +  +V     FP          ++  PSK  + D
Sbjct:   38 CNCQCISLQFRDSRGRTYGNCRSTTNGAQWCYVKYDGF--SPCPDLRVSQRFRGRYWSNHAXATPAENSPIXRSV-----FPPFIPLXAXXPASSVPSKNVADD 134

[Close]

BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000000311 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:206967:207933:1 gene:EMLSAG00000000311 transcript:EMLSAT00000000311 description:"maker-LSalAtl2s1046-augustus-gene-1.15")

HSP 1 Score: 67.3958 bits (163), Expect = 5.549e-15
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0

Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            C CQ  SL+FRD    ++GNC++  NG QWCY+  +  R   CPD   S RF G+ WS  +CATP
Sbjct:   58 CNCQXISLTFRDSRGTIHGNCKSMINGAQWCYVKYD--RFSPCPDLRASQRFRGRYWSNHACATP 120

[Close]

BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000004889 (pep:novel supercontig:LSalAtl2s:LSalAtl2s257:179358:180381:1 gene:EMLSAG00000004889 transcript:EMLSAT00000004889 description:"maker-LSalAtl2s257-augustus-gene-1.12")

HSP 1 Score: 64.3142 bits (155), Expect = 2.476e-14
Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = 0

Query:    1 SLSEAQTVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            +LS AQ  +   AP+  V++C CQCSSL+F D   R+ GNCR+  + G +WCYI      +  C D+  S+RF   +WSY +CATP
Sbjct:    3 TLSSAQNGIILKAPSL-VQNCGCQCSSLTFADSYGRIQGNCRSADYTGARWCYI----PFSHTCNDAQYSSRFR-NQWSYEACATP 82

[Close]

BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000002406 (pep:novel supercontig:LSalAtl2s:LSalAtl2s145:1581187:1602244:-1 gene:EMLSAG00000002406 transcript:EMLSAT00000002406 description:"maker-LSalAtl2s145-augustus-gene-16.13")

HSP 1 Score: 56.9954 bits (136), Expect = 1.989e-11
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0

Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            R+C CQC  L + D+   ++GNC +T +G  WCY+  +  ++  C D   S  F  + WSY +C TP
Sbjct:   53 RNCLCQCIPLQYVDRKGIMHGNCTSTNDGALWCYV--KYQKSSPCGDLVKSDIFQDRYWSYHACTTP 117

[Close]

BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Match: EMLSAP00000002890 (pep:novel supercontig:LSalAtl2s:LSalAtl2s166:445712:450389:1 gene:EMLSAG00000002890 transcript:EMLSAT00000002890 description:"maker-LSalAtl2s166-augustus-gene-4.9")

HSP 1 Score: 53.5286 bits (127), Expect = 2.853e-10
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0

Query:   19 RDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATP 85
            ++C CQC+S +F D      GNC ++ F GG+WCY+         C D+ PS R+ G +WSY +C+TP
Sbjct:   32 QNCGCQCNSYTFSDIKGYTQGNCFSSDFTGGRWCYVD----YGNTCHDAVPSLRYNG-QWSYEACSTP 94

[Close]

BLAST of EMLSAG00000001327 vs. nr
Match: gi|155966304|gb|ABU41105.1| (hypothetical protein [Lepeophtheirus salmonis])

HSP 1 Score: 74.3294 bits (181), Expect = 1.204e-14
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0

Query:   11 AAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCAT--PSTRQCVLDAVRNGG 99
            A AP N+  DC CQC +LSF D+  +  GNCR+TFNG QWCY+ ++   +  CPD   STR+ GK +S  +C T    + +C+   + N G
Sbjct:   23 APAPINSQADCQCQCIALSFYDEYGQQQGNCRSTFNGAQWCYVENDGYSS--CPDLKRSTRYRGKYYSNHACITLPAYSPECLGFVIYNEG 111

[Close]

BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold82_size396747-snap-gene-2.41 (protein:Tk06844 transcript:maker-scaffold82_size396747-snap-gene-2.41-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 52.7582 bits (125), Expect = 2.138e-9
Identity = 25/71 (35.21%), Postives = 39/71 (54.93%), Query Frame = 0

Query:   21 CFCQCSSLSFRDKNNRVNGNCRTTFNGGQWCYITDEAARNGDCPDSNPSTRFPGKKWSYFSCATPSTRQCV 91
            C CQC++ +F+  +N ++GNC   + G  WCY+ D       C D   S+R  G  WS+ +C TP  + C+
Sbjct:  249 CDCQCNNYTFK-FDNTLHGNCLQPYKGALWCYVKDFGQST--CIDRLESSRVSGLFWSFQACGTPKYQDCL 316

[Close]

BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.30 (protein:Tk01607 transcript:maker-scaffold381_size190066-snap-gene-0.30-mRNA-1 annotation:"hypothetical protein AN3340.2")

HSP 1 Score: 49.6766 bits (117), Expect = 1.740e-8
Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 0

Query:   13 APANNVRDCFCQCSSLSFRDKNNRVNGNCRTTFNGGQ----WCYITDEAARNGDCPDSNPS-----TRFPGKKWSYFSCATP--STRQCVLDAVRNGGCFPQVFDTKIN 110
            AP+N V  C CQC + +++  +N+++GNC   F+  Q    WCY+   +   G+C D   S     +    +KWSY +C+TP  ++ QC     RN G F  V +   N
Sbjct:   38 APSNQVS-CNCQCDNYTYKGGDNQIHGNC---FSADQTKAKWCYVDQYS---GECDDIQYSKNRRDSHGNLRKWSYQACSTPERASHQC-----RNNGSFNSVINNNSN 134

[Close]

BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.32 (protein:Tk01608 transcript:maker-scaffold381_size190066-snap-gene-0.32-mRNA-1 annotation:"---NA---")

HSP 1 Score: 47.3654 bits (111), Expect = 1.367e-7
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0

Query:   13 APANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPD----SNPSTRFPG-KKWSYFSCATP 85
            AP+N V  C CQC + +++  +N+++GNC T     G+WCY+      N DC D     N    F   ++WSY +C+TP
Sbjct:   40 APSNRVS-CNCQCDNYTYKGDDNQIHGNCFTADHTRGKWCYLDQ---YNNDCDDIQYSKNRRDSFGNLREWSYQACSTP 114

[Close]

BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold381_size190066-snap-gene-0.31 (protein:Tk01605 transcript:maker-scaffold381_size190066-snap-gene-0.31-mRNA-1 annotation:"hypothetical protein")

HSP 1 Score: 45.4394 bits (106), Expect = 6.003e-7
Identity = 34/101 (33.66%), Postives = 47/101 (46.53%), Query Frame = 0

Query:    7 TVLKAAAPANNVRDCFCQCSSLSFRDKNNRVNGNCRTT-FNGGQWCYITDEAARNGDCPDSNPS-TRFPG----KKWSYFSCATPSTRQCVLDAVRNGGCF 101
             VLKA +   N+ +C CQC   ++RD   RV GNCR+       WCYI   A  +  C D   S  R       ++WSY +C+TP+    +      GG  
Sbjct:   37 IVLKAPS---NLINCGCQCDPYTWRDTLGRVQGNCRSADATKALWCYIPASAFTS--CADIRQSRNRLDNFGRPRRWSYEACSTPALTSPICLGFGQGGLL 132

The following BLAST results are available for this feature:

BLAST of EMLSAG00000001327 vs. GO
BLAST of EMLSAG00000001327 vs. C. finmarchicus
BLAST of EMLSAG00000001327 vs. L. salmonis peptides
BLAST of EMLSAG00000001327 vs. SwissProt
BLAST of EMLSAG00000001327 vs. Select Arthropod Genomes
BLAST of EMLSAG00000001327 vs. nr
BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000001327 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001327 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592848675\|gb\|GAXK01108869.1\|	1.243e-16	47.56	TSA: Calanus finmarchicus comp296545_c0_seq2 trans...	[more]
gi\|592932367\|gb\|GAXK01026186.1\|	1.922e-16	50.00	TSA: Calanus finmarchicus comp18158_c2_seq11 trans...	[more]
gi\|592932369\|gb\|GAXK01026184.1\|	2.086e-16	50.00	TSA: Calanus finmarchicus comp18158_c2_seq9 transc...	[more]
gi\|592848676\|gb\|GAXK01108868.1\|	3.176e-16	47.56	TSA: Calanus finmarchicus comp296545_c0_seq1 trans...	[more]
gi\|592932379\|gb\|GAXK01026174.1\|	3.383e-16	50.65	TSA: Calanus finmarchicus comp18158_c1_seq4 transc...	[more]
gi\|592906544\|gb\|GAXK01051831.1\|	7.286e-16	39.80	TSA: Calanus finmarchicus comp28981_c1_seq1 transc...	[more]
gi\|592932381\|gb\|GAXK01026172.1\|	8.286e-16	45.98	TSA: Calanus finmarchicus comp18158_c1_seq2 transc...	[more]
gi\|592932378\|gb\|GAXK01026175.1\|	1.061e-15	45.88	TSA: Calanus finmarchicus comp18158_c1_seq5 transc...	[more]
gi\|592932380\|gb\|GAXK01026173.1\|	3.749e-15	48.61	TSA: Calanus finmarchicus comp18158_c1_seq3 transc...	[more]
gi\|592953585\|gb\|GAXK01004968.1\|	1.077e-14	44.30	TSA: Calanus finmarchicus comp348412_c0_seq1 trans...	[more]

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BLAST of EMLSAG00000001327 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 14


Match Name	E-value	Identity	Description
EMLSAP00000001327	1.530e-89	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2197...	[more]
EMLSAP00000005911	6.132e-54	64.12	pep:novel supercontig:LSalAtl2s:LSalAtl2s31:133690...	[more]
EMLSAP00000000858	1.513e-18	50.75	pep:novel supercontig:LSalAtl2s:LSalAtl2s1146:1430...	[more]
EMLSAP00000000366	7.155e-17	47.30	pep:novel supercontig:LSalAtl2s:LSalAtl2s1053:5701...	[more]
EMLSAP00000001837	2.060e-16	50.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:7214...	[more]
EMLSAP00000001834	3.704e-15	38.46	pep:novel supercontig:LSalAtl2s:LSalAtl2s1318:3408...	[more]
EMLSAP00000000311	5.549e-15	47.69	pep:novel supercontig:LSalAtl2s:LSalAtl2s1046:2069...	[more]
EMLSAP00000004889	2.476e-14	44.19	pep:novel supercontig:LSalAtl2s:LSalAtl2s257:17935...	[more]
EMLSAP00000002406	1.989e-11	37.31	pep:novel supercontig:LSalAtl2s:LSalAtl2s145:15811...	[more]
EMLSAP00000002890	2.853e-10	41.18	pep:novel supercontig:LSalAtl2s:LSalAtl2s166:44571...	[more]

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BLAST of EMLSAG00000001327 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001327 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000001327 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1


Match Name	E-value	Identity	Description
gi\|155966304\|gb\|ABU41105.1\|	1.204e-14	42.86	hypothetical protein [Lepeophtheirus salmonis]	[more]

BLAST of EMLSAG00000001327 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 4


Match Name	E-value	Identity	Description
maker-scaffold82_size396747-snap-gene-2.41	2.138e-9	35.21	protein:Tk06844 transcript:maker-scaffold82_size39...	[more]
maker-scaffold381_size190066-snap-gene-0.30	1.740e-8	33.03	protein:Tk01607 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.32	1.367e-7	36.71	protein:Tk01608 transcript:maker-scaffold381_size1...	[more]
maker-scaffold381_size190066-snap-gene-0.31	6.003e-7	33.66	protein:Tk01605 transcript:maker-scaffold381_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1223	supercontig	LSalAtl2s1223:219743..221280 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1223-augustus-gene-2.67
Biotype	protein_coding
Evidence	IEA
Note	hypothetical protein [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000001327 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000001327	EMLSAT00000001327-697174	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1223:219743..221280+

gene from alignment at LSalAtl2s1223:219743..221280+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000001327-684093 ID=EMLSAG00000001327-684093|Name=EMLSAG00000001327|organism=Lepeophtheirus salmonis|type=gene|length=1538bp|location=Sequence derived from alignment at LSalAtl2s1223:219743..221280+ (Lepeophtheirus salmonis)
AGCCTCTCCGAGGCTCAAACAGTCCTCAAGGCTGCAGCACCAGCAAATAA
CGTACGAGACTGCTTTTGTCAATGTTCCAGTCTTAGTTTCAGGGATAAGA
ATAATCGTGTGAATGGAAACTGCAGAACGTGAGTTTATAAATATCCATTC
CATCATATTATAATTGATTTTTATATAAGTAATGAGTTTTTCATTAAGAG
CGCTTCAACTCTTATATAAATAAAACACAAACGGTTACAAATTTTACCAA
ATTTATTTTTTCAGTACAAATTGTAGACATATTGATTTGTTGATTTGTTT
GATGTGACCATAACGAGCACGTTTACAGAAGTCCAATCGTTGAACCCCTT
TTTTCCATTACTTTTTCTAATAAATTGATCGATATTGTAGCAATTTGACG
TTCGATATTTTCTCTGAGCTCTTCTGACGTCGCCAGATTATTAGTGTAGA
CTAATGACTTCCAAGGCCCAAAAGAAAATAATACAAAGGCGTTAAATCGC
ACGAGCGAGCTGGTCAATCAGCTGGTCATTTCTCGAAATAACACGCTCAT
CAAATTTGCTTTGCAATAAATCAATCGTAAAGTTTGCTGTTGACAAAGTG
GCACCGTCTTGTTGAAGCTACATGTCTCCCAAGTCCATTCCTTCCAATTG
GGGCAAAAGAAAAATCAGTTATCCTGGTATGATAGTGATTTCCATTTACA
GTAACGTGGCTATTATCATCATGAAGGAAAAAATATGGCCGAATGATTCC
TCCAGCATGAAGTTTACTGCAAACAGTAATTTTTTCGAGATGCAATGATA
TCTCGTGAATCCCTTGTGGATTGCTTTTTGACCAATAATGCATTTTTTGC
TTATTAACAAAGCCATTAACCCAAAAATGAATTTCATCACTCAAGATGAA
TTTATGTTCTTAATATTGCGACAATTTAACAGTCATTTTGATAATAAATT
TGGATAATTTGCAATCACTGATAGAGTGTATATTGTTCCATGATTAAAGG
TATACCAATGAAGTTCCTAAATTTACTTTCTAAATTACATATGGCATCTT
TTTCCCCCTAACGGGGAAAAAATGAAGCATCGGTTATGAAAAACCATTTA
AGACTTAACTAATTTATATTATTTATCCTTTTTAGAACATTCAATGGAGG
ACAATGGTGTTATATTACAGATGAGGCCGCTCGTAATGGAGATTGCCCAG
ATTCTAATCCTTCCACCCGATTCCCTGGAAAAAAATGGTCATACTTCTCT
TGTGCTACTCCAAGTACCCGTCAATGTGTCTTGGATGCAGTGGTAAGTTT
TTATCTGATTAAATGTAATTATTTAACCTATTATTATGGATTATTTTTTA
TAATAGAGAAATGGAGGCTGCTTCCCTCAAGTTTTTGATACAAAAATAAA
CGTCAAATCCGCCTTCAAGCCATCTAAAMCTCCATCATCCGATCCTAACT
CTCCTTAAAAATATATCCCTACCTGAAATTGTACCTTCAAATTATAGATA
TATTATATATATATAGATAAATAAAAATTATAGCGACA

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