EMLSAT00000001338, EMLSAT00000001338-697185 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001338
Unique NameEMLSAT00000001338-697185
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1223supercontigLSalAtl2s1223:326354..328131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001338 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001338EMLSAG00000001338-684104Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005831EMLSAE00000005831-714759Lepeophtheirus salmonisexon
EMLSAE00000005832EMLSAE00000005832-714760Lepeophtheirus salmonisexon
EMLSAE00000005833EMLSAE00000005833-714761Lepeophtheirus salmonisexon
EMLSAE00000005834EMLSAE00000005834-714762Lepeophtheirus salmonisexon
EMLSAE00000005835EMLSAE00000005835-714763Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776408auto776408Lepeophtheirus salmonispolypeptide
EMLSAP00000001338EMLSAP00000001338Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001338

>EMLSAP00000001338 ID=EMLSAP00000001338|Name=EMLSAP00000001338|organism=Lepeophtheirus salmonis|type=polypeptide|length=99bp
LPNGIPVVQWLILPRRILRVLSIRLRIGSSIYDETQKKITDRTFLRSTIY
NVSLFRLISSIGFAECQLLYYHEESRILEVSSEWYPRCPVVNPTTKNLE
back to top

mRNA from alignment at LSalAtl2s1223:326354..328131-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001338-697185 ID=EMLSAT00000001338-697185|Name=EMLSAT00000001338|organism=Lepeophtheirus salmonis|type=mRNA|length=1778bp|location=Sequence derived from alignment at LSalAtl2s1223:326354..328131- (Lepeophtheirus salmonis)
CTTCCGAATGGTATCCCCGTTGTCCAGTGGTTAATCCTACCACGAAGAAT CTTGAGGTATGTATTATATAGCTTTTTTAATCATGAGTTATTGAATGATG ATTTCCTATGTATCAATTGGTTAGAACTGGAGTGTTACGATGAAGCCTGT TAACTAGGGCGAACTGATTATTTGTCATAAACTTATTATTTCATTGTTTC TAGTTCGAGTAACTAATTTCTTGTTTCTTTCATTATAGGGTACTCAGCAT AAGATTACGAATTGGATCATCCATTTATGACGTAAGTTCAACTATTTTTG CATTTTTTATCCATTGAAATCCCAGCTCCTCACCTCAGGTTCTGGATTTA ATTTATATCCGAACCCTGAGCTTTTCTATGAGTCTAGGGAAGAATAAAAT ATTTAATCTCTCTTAAAACACATGTTCGTTCTTTATGAGCGGGGGTGCAC CTGAAGTTAGATACAGCGTCTTTTACAATTTTCGAACTGAAGAATTTAGT TGTTCTTTCATTTCCTTCATTAATTCTTTTTTTTCTTTCTGATATAGATT ATGTCAAGGTTTCCCNTGTTGTAATTACAAGAGTGTTTTATCCTGTATTA ACCATAGAATTGCATGTTCTTGAGGTATGTATTATATACCCATTTTGAAT AAATGTAATTGAATGATGATTTCCTATGTATCAATTGGTTAGAACTGGAG TGTTACGATGAAGCCTGTAAACTAGGGCGAACTGATAATTTTTTGTAGAA CATTTAACATTTCCGTGATTCTATTTCGTGCGACTAATTTTTCGTTTTTT CCTTTTTAGGAAACTCAAAAAAAGATTACTGATAGGACCTTCCTCCGATC AACCATTTACAATGTAAGTTCAATTATTTTTGCGTTCTCTATCTTGTGAA ATCCCAGCTCCTCACCTCAGGTTCTAGATTGAATATATATCTGAACCCTG AGCTTGTTCCATGAGTTTAGGGAAGAATAATTAGATAAATCTCTCTTAAA ACACATGTTCGTTCTTTATGAGTGGGGGTGCACCTGAAGTTAGATATAGC GCCCTTAAAAATTATCTCATTGAGGAATGTAATTTTTTTTTATGTCTTGA ATACATACTTATTTTTTTGGTATTATATAGGTTTATTCCGGTTGATTTCC TCCATTGGATTTGCAGAGTGTCAACTTCTATATTACCACGAAGAATCACG TATTCTTGAGGTATGTATCATGTAGCTATTTTTGGCATCTGTTATTAAAT GATGATTTCCTATGTATCAATTGGTTAGAACTGGAGTGTTACGATGAAGC CTGTAAACTAGGGCGAACTGATTATTTTGAAATTAACTATTAATATTTTC ATGATTCTATTTCAATTACTAATTTCTCGTTTCTTTTTTCCTAACAGGAT ACTCAACACAAGTTAATAAATCGGATCTTTCCCTGATGAGCTATTCACGA TGTAAGTTCAACAATTTCGCATTCTTTATCTATTAAAATCCCAGCTCCTC ACCTCAGGTTCTGGATTTAATTTATATCCGAACACTGAGCTAATCTATGA GTTGAGGGAAGAATAAAATAATTAATCTCTCTTTAAAACACATGTTTGTT CTTTATGAGCGGGGGTGCACCTGAAGTTAGATACAGCGCCTTTTGAAACT CCTGGAATTAAAGAATTTAACTGGTCNTTCATTTCCTTAATTCACTCTTC TTCTTTTTAATTATTTAGGTTTCTTCCGAATGGTATCCCCGTTGTCCAGT GGTTAATCCTACCACGAAGAATCTTGAA
back to top
Add to Basket