EMLSAT00000001345, EMLSAT00000001345-697192 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001345
Unique NameEMLSAT00000001345-697192
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1228supercontigLSalAtl2s1228:15906..17054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001345 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001345EMLSAG00000001345-684111Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005858EMLSAE00000005858-714786Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769240auto769240Lepeophtheirus salmonispolypeptide
EMLSAP00000001345EMLSAP00000001345Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001345

>EMLSAP00000001345 ID=EMLSAP00000001345|Name=EMLSAP00000001345|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MNNKRRDRNNYGVGGGGGGGYNFPSWNYGCTLENNTQTGAFETFYNGVRE
SKRHEVPIASPVPPPSLSLPSATTSSQKSGSTPSQNEDSQKKVLEEAPNE
QQQEDASPEKPIQEILEGRNAIVFCNEQSKLRNWSMEWEQVSEEGPPHMK
VFTWCLKIGDISVVASANSKKGAKNKAAEDMARKLDKLPKAKKRAHPFQM
MGYPPPMMYGMNPMM
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mRNA from alignment at LSalAtl2s1228:15906..17054-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001345-697192 ID=EMLSAT00000001345-697192|Name=EMLSAT00000001345|organism=Lepeophtheirus salmonis|type=mRNA|length=1149bp|location=Sequence derived from alignment at LSalAtl2s1228:15906..17054- (Lepeophtheirus salmonis)
ATGAATAATAAGCGCCGTGACAGGAACAACTACGGTGTCGGCGGAGGCGG
MGGCGGTGGATACAACTTTCCGTCATGGAACTATGGTTGCACACTTGAAA
ACAACACTCAAACAGGAGCATTCGAAACATTTTATAATGGAGTAAGGGAA
TCCAAGCGGCATGAAGTTCCTATTGCATCCCCAGTCCCTCCACCTTCACT
CTCTCTACCATCAGCGACAACATCATCTCAGAAATCTGGCTCAACTCCCT
CGCAAAATGAAGATTCACAAAAAAAGGTGCTGGAAGAGGCACCTAACGAA
CAACAACAAGAAGATGCTTCTCCAGAAAAGCCCATTCAAGAGATTTTAGA
GGGTCGCAACGCCATAGTTTTTTGTAACGAACAATCAAAATTGCGAAATT
GGAGCATGGAATGGGAACAGGTCTCGGAGGAAGGTCCTCCACATATGAAG
GTGTTCACTTGGTGCTTAAAAATAGGAGATATTTCGGTGGTAGCATCTGC
TAATAGCAAGAAAGGAGCTAAGAATAAAGCCGCTGAAGACATGGCACGGA
AGTTGGACAAATTACCTAAGGCAAAGAAACGAGCGCATCCCTTTCAAATG
ATGGGGTATCCTCCTCCCATGATGTATGGAATGAATCCTATGATGTARCC
TCCACACATGGTTCGATCTCCAMGGCAAAATCATCCACGKCCTGCCAAAA
AAAAGAAACCTAACAGAAACAATAAGGAAGGAAATGCAAGCTCGTCATCT
GTGGAAAATAAACCAAAATTACCTAATCCCTCACAAGATAATCCCATATC
TCAATTGTACGAATATTGCAAAAGGATCAAAGGGCCTGAACCTGTCTTTA
CGACTATTTCTGAAAAACCTATCGAGTCTTGTGTAACGGATCGAGGTTTT
TATCGAAAAAAGGTGGAATTTACATTACAGGTTGAGGTGGCTGGAAAAAA
GTATGAAGGAACAGCTATGACAAAGAAAGACGCGAAGCATAAAGCTGCTG
GAACTGCATGGGCTTCTATTGAGAATGAGATGAAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAA
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