EMLSAT00000001346, EMLSAT00000001346-697193 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001346
Unique NameEMLSAT00000001346-697193
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1228supercontigLSalAtl2s1228:17504..18509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001346 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001346EMLSAG00000001346-684112Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005859EMLSAE00000005859-714787Lepeophtheirus salmonisexon
EMLSAE00000005860EMLSAE00000005860-714788Lepeophtheirus salmonisexon
EMLSAE00000005861EMLSAE00000005861-714789Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769302auto769302Lepeophtheirus salmonispolypeptide
EMLSAP00000001346EMLSAP00000001346Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001346

>EMLSAP00000001346 ID=EMLSAP00000001346|Name=EMLSAP00000001346|organism=Lepeophtheirus salmonis|type=polypeptide|length=75bp
MRLMRTANIDGERDESHPTTFDNFKESSTFESLPGRIPKRRVGGSKKYRI
LLADVWEMEASLSATRINKKNYGIS
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mRNA from alignment at LSalAtl2s1228:17504..18509+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001346-697193 ID=EMLSAT00000001346-697193|Name=EMLSAT00000001346|organism=Lepeophtheirus salmonis|type=mRNA|length=1006bp|location=Sequence derived from alignment at LSalAtl2s1228:17504..18509+ (Lepeophtheirus salmonis)
ATGCGACTAATGAGGACTGCAAATATTGACGGTGAAAGGGATGAGAGTCA
TCCTACAACCTTTGACAATTTCAAGGAGTCTTCGACTTTCGAGAGCCTTC
CTGGAAGAATCCCTAAGTAGTTAGTAGTTGGATAGAAAGAGAAAAATCAC
AGAAAGAGAGAGAAATAATAGAACAMGGGAGCCAAGTGACTTACATTCAT
TTTTAATAGCCATTATCAAAGATAAGAATCTTACATATTTATAATTAAAA
TATTTAAAAAANCCTGGATTAATTATAATTATATGCTTTCAGATGGTATT
TAGAAGAAATACAAAGTACTGAGTCCTCTTTAAAAATATATTCCCTTTAT
AGCATCATTATTTGACGTATTTATTTAAGCCAATAGCATAAGCTATTTAT
AGAACATCAAATTGAACTCATCTAAAAAACAATACTTAGATGATTAAATG
AATATCTTTAAGATATTTTTTGGAAAATTAACAACATTTTGCTAATTATA
TTATATTATAAAATCCTCTCCTTCCTAAAAACATCATATTTTTATATTTT
TTCTTTTCCATTTTTACATAATATTTTATTAAAGATACTAACTAAATTCA
TTCGAAATGTCACAAATCACAATATTAAGGAAATGTAATTAATTTTTGAT
CAAACTAAGAAAATTACTCATTTCGCAAAATATCTAAAAATAATCCAAAA
AAATAACATAATTTGGCCAATTGCATGTACGCGTCAAAATGAGTCAACTA
GTAGGGCAGTCATGGTTTAATGCTATAGGCAGTCACAAAGAAAAAAAAAT
AATAAATAAAAATAGGCGTCGTGTGGGCGGTAGTAAAAAATATAGAATAT
TGCTAGCAGATGTATGGGAAATGGAGGCTAGTTTATCTGCCACGAGAATT
AATAAAAAGAACTACGGAATGTTAATTTTACAAACTTTACTTCTTATTCA
GAAATAATGTATAAATTTAGTAAATTTAGTATTAGTAAATTTTTTTTAGA
AGTTAG
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