EMLSAT00000001442, EMLSAT00000001442-697289 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001442
Unique NameEMLSAT00000001442-697289
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1246supercontigLSalAtl2s1246:230055..233072 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001442 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001442EMLSAG00000001442-684208Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006257EMLSAE00000006257-715185Lepeophtheirus salmonisexon
EMLSAE00000006258EMLSAE00000006258-715186Lepeophtheirus salmonisexon
EMLSAE00000006259EMLSAE00000006259-715187Lepeophtheirus salmonisexon
EMLSAE00000006260EMLSAE00000006260-715188Lepeophtheirus salmonisexon
EMLSAE00000006261EMLSAE00000006261-715189Lepeophtheirus salmonisexon
EMLSAE00000006262EMLSAE00000006262-715190Lepeophtheirus salmonisexon
EMLSAE00000006263EMLSAE00000006263-715191Lepeophtheirus salmonisexon
EMLSAE00000006264EMLSAE00000006264-715192Lepeophtheirus salmonisexon
EMLSAE00000006265EMLSAE00000006265-715193Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774942auto774942Lepeophtheirus salmonispolypeptide
EMLSAP00000001442EMLSAP00000001442Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001442

>EMLSAP00000001442 ID=EMLSAP00000001442|Name=EMLSAP00000001442|organism=Lepeophtheirus salmonis|type=polypeptide|length=429bp
MKILFNLFFVTVFSNFYTPVNSGATILDSTNIDETLANNELVLINFYADW
CRFSNMLSPIWDEAANKISEAFPKPGKVVVGKVDCDSQANLGTRFHITKY
PTLKYVRNGIVAKKEYRGSRTAEAFLKFAEDQLIDPVKEYTDLQVLTKLE
DAKRYLIGYFDTKESKEYEHFRRVASNLKDDCEFHAGFGEVTAQMHPADQ
SIIAFRPNKAHSSEDDESFKGDLKKYESLNIMLFFFILCLIIGSTCSYDE
FSIWAVDKCTPLVRSITFENAEELTEEGLPFLILFHDPEDHKSIKQYTDI
IQTNLLSEKQNVNFLTADGVKFAHPLHHLGKSKEDLPLIAIDSFRHMYLF
PKYEDIFVDGKIKQFLQELYSGKLHREFHYGPDTTSTENSTGQKVPQKKG
SNKEGTPPPSQFQHLGPSKNRYTLLRDEF
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mRNA from alignment at LSalAtl2s1246:230055..233072+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001442-697289 ID=EMLSAT00000001442-697289|Name=EMLSAT00000001442|organism=Lepeophtheirus salmonis|type=mRNA|length=3018bp|location=Sequence derived from alignment at LSalAtl2s1246:230055..233072+ (Lepeophtheirus salmonis)
ATTTAACGCTTCTAGCTGGCAGAAAAAATCCAGGACAAAGTACCTTGTAC
ATATATTCATCACGTGGTCTTCGTTTCACCACTTAGTTAAAAAGCTTCTT
AACTCTACATAAACGTAACATTAAAATATTTATTAACATATTCATTTAGT
GTATTTACCTTTAAGCTGCTTCAATAGATAGATTATTTTGTCTTAGAGGA
TCATCGTCATCAATCCTAACTTCGTCGTCATCAGTTGAAAGGGGACAAGT
TACTGGGGGTTTCTTTGACGGTGGACTCAGTGGAGTAGTGGCTTAAGGTC
TATTGGGTGGYCAAGGYTATATATAKGTGGAATAGTCCACATTTCTACCA
TTATGAAGATCCTTTTTAACTTATTTTTTGTTACTGTAAGTAATGGAGTG
GAGTTGTGTCACTCCTAGTATTTGTCACACTGGATGTAATAGACGTCACT
TCGTTGTCATTCATGAGTATCTCACTCCATAACAAGAGTGTTCATCCACT
TTTTTTCTATTCAGCTTCTAACTTATGGACCTCTCAATTGAATATTCTCC
TTTGAGTTGCTTCTAAAGTTGAAAATCCTTCATTTCATGAATCAAGAAGC
AAGATTAAATAATTATCTCCTATTCCTTTTCTTTCTAAAATAATTGCTTT
ATGTGGCTTCTTATACATTTCATAGTGAATCAAAAATGGCTCTACTAAGA
GCACCTTTGGGCAGTTGCAGAATACCCCTATTCATGAGCTATCTTAAGCT
ATACATTGTATATCATTAATTTCCCAATCATGAAAAGAACTGCACATGTA
AAAGTATTTATAATTACAAGACTCACAGGAACAAGTTTAAAGTAAATACA
TTTGTATAGTATTCATAGATGATTAGCCTAATTACTCTTTACATTATTAT
ATATTTCGATGTCTCTATACATTTGTACACACTTGTTATAATAATGTATG
TACAATTGTGAATGTACAATATTTGTTCACATTATTTTTCAAACTTCTAT
ATTACTTATATTTTTTTATTTAGGTCTTCTCAAACTTTTACACTCCTGTG
AATAGTGGTGCAACAATCTTGGATAGTACGAATATTGATGAAACCTTGGC
AAATAATGAGTTGGTCTTGATCAATTTTTATGCGGATTGGTGCCGATTCA
GTAATATGCTATCTCCCATTTGGGATGAGGCTGCAAACAAAATTTCTGAA
GCCTTTCCAAAACCAGGGAAAGTCGTCGTCGGAAAAGTGGATTGTGACAG
TCAAGGTTATTATTATAGTATTTATTATTATTTATAATTCATTATGTATT
AATTTTAGCTAATTTGGGCACCCGATTTCACATTACTAAATATCCAACGT
TGAAGTACGTACGAAATGGTATTGTGGCTAAGAAAGAATACCGAGGCTCT
CGAACGGCCGAGGCTTTTTTGAAGTTTGCTGAAGATCAATTGATTGATCC
TGTTAAGGAGTATACTGATCTGCAAGTGCTTACCAAGTTGGAAGTAATTT
GATTCATTCCATTATTAAAACTACAAAATATTTAATTTTTTTTTTATCAC
ATTAGGATGCCAAACGATATTTAATTGGATATTTTGATACTAAGGAGTCG
AAAGAATACGAACATTTCCGCCGGGTCGCTTCAAATCTTAAAGATGATTG
CGAATTCCATGCTGGTTTTGGAGAGGTAAATTAAATTCAAAATATTGCCT
TATTCATTTTGACAATTTATTTTCATGTATTAAGGTAACTGCTCAAATGC
ATCCTGCTGATCAATCCATCATTGCTTTCCGTCCAAATAAAGCACACTCC
TCCGAAGATGATGAGTCGTTCAAGGGTGATCTTAAAAAGTATGAGTCTCT
AAATATTATGTTGTTCTTTTTTATATTATGTCTTATTATTGGATCTACTT
GTAGTTATGACGAGTTCAGTATTTGGGCTGTTGATAAGTGTACTCCACTA
GTGAGGAGTATTACATTTGAAAACGCTGAGGAACTTACGGAAGAAGGTCT
ACCATTCTTGATATTATTTCATGATCCTGAAGATCACAAAAGTATTAAAC
AATATACGGATATAATTCAAACGAATCTGCTCTCTGAGAAACGTAAGCTT
TTAAATAGTTTACTTTCCGTTCTCCCTTACATTGATTATAAAATATTACA
GAAAATGTAAACTTCCTTACTGCTGATGGTGTTAAATTTGCTCATCCTCT
GCATCATTTGGGAAAGTCAAAGGAAGATCTTCCACTCATTGCTATTGACA
GTTTTAGACATATGTATTTATTTCCCAAGTATGAGGATATTTTTGTCGAT
GGTAAAATTAAACAGGTATTAATGTTTGTTTGTTTTTGAATTAACATTGA
TGCAGATTTTTACTTTGTTTTTAGTTTTTGCAAGAGCTTTATTCTGGGAA
ATTACACAGGGAGTTTCATTACGGTCCCGATACTACTAGCACGGAAAATT
CTACAGGCCAAAAAGTATGTGATTCCTATCCTGTTACTTTATTTCCAATG
ATGATGATAATTTTTATTAATTATTTTTTAGGTACCTCAAAAGAAAGGCT
CTAATAAAGAGGGAACTCCACCACCATCTCAATTTCAACATCTTGGTCCT
TCTAAGAATAGATACACACTGTTGCGCGACGAATTTTAAACTTTTTTAAA
ACTATCCTGCTGTGATTAATATTATTATTATTATTACTTTACTATTTTAG
CTTGATTCCAATCATGTAAATTTCTCTATGTAAATGATTATGAGTTTGTA
CAGTAAAAGGGCAACATAGTTTTTCCTTTGCGTTTATATATATATATAGT
ACATTGATATACAATATTGGAAGGTATGTATTTGATTGATAGTGGTATTA
GTGATGAGAAAGGTTATTACAAATGTATCATGATTCATGAAATATATTTG
AGACTAACTAATGATTTTAAATGCTTTGGGCATTCCATCCACTTGAACAT
TAAGTATGTAATTTAATATATACTATGTATTCAAATGTTAATCGAGCTAA
TTTCTATTTCTCTTAAAT
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