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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1249 | supercontig | LSalAtl2s1249:141241..147078 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001465 >EMLSAP00000001465 ID=EMLSAP00000001465|Name=EMLSAP00000001465|organism=Lepeophtheirus salmonis|type=polypeptide|length=1439bp
MTNNVNKTVKSMKKNPLDVEAGKYRLWEKNRRDRFNAGLETLSASLPDYE
SGVSKWPKADIVERAINYIKALQAQRIPDDLQRRIKGLKRQNSKLREIIR
SKLAKEMDQKEFSKLNLQEIQSLXNKYEEAKANKENHPEKPAFLPTGDDH
SYSLCSHDSSEPDLEVASEEVVEESSQEITQTTLSSSSPPTPTTTNXPLV
NSLTLKPXTILSTPSGTLLNPTTWTVPHHSFIAIDPNPIISTVPYMMRPL
MKLALPRLSSRVPYIKKSQKKVVENNAKKNNKICKGLEKMNTTSVQVETS
QENVEEIIDLTPSEKSDDYMDECDKNDSSESLDLPSTHLDEFDLKASSTL
PDAILASEDPEEIDKKEKTDGSSKKDEKEYVKTSGEIVDTKDKSEESSSS
SPVTKPQEVIQIKKKSQAASGKSFDKSGGNGKSKSKSSYSIAALCQISVN
IGGDPLVASETMVNSPGVVSLNSFGTASPSVXPAPSTPPAPTPPIDKKEA
DKVIQXLKPVPPSVIKQAIDSKITGVCLAPPPPPPPLSDSCKVKSIMTPH
NTIPKKEIPSSTCVKKNEINFKEVDSSKKSIAAPLPPTKDSRLIELQYTN
HNKSIEKVQSYKKDPSMVQEVKCSSTVGSSTHITENSQNNSGSNTTASNT
KQWTQESQIHSSTHYQHALQSSTVTHIFPPPAPKTNPCNNNPSLALKESG
SQNIGKNSHYNKVVSTSLTGAVQSQQSHSHHQQQRQQSQVIHHQQQYIQG
YTTTTTNNNNQAPIQNSLLQQPQQQIHEHQEFHYGNNTTILNEFLGHPLQ
TALPSSTPSASSAALQFHQGTGNSGXSSNEALHRYNYSSITPSNPYQAHH
HHHHQSTTAIXPAANNPGTDYHHHNHHSTSGQGNSSTNGSSSANNQVHTA
NHQRQLNEQLQSSQNDQYFPYNRSYYTSTQNQYDLHASSSTSKQQHPQQQ
KVSQQLVQQQQQQLLQQHQQQLQAVASLQMNSTAMMQPNTFSVNQLVSNA
SSSSSKXQRKGSKRASTSSSYEVSNKKSTRNPGVASTNVSQSSXADKDSS
SRPKEDKKLLKVGPSSSRSSSTLSLKVPSSSLPRKGNYSAESLIMDPSQY
THNIAALEYQQMQQHQHQTNKTKMDFSSGWTTTPPSTTPSMMFPSIECTT
SAATQFCSMSPSPFPQDLEFSMFISGNDASSYVSPSVAAKNNFKASASVV
ASGHNKMNNNSQHHQNLLFDNSNIFPLPNLTPPTAVEDPYASFMNSSSHH
HHGAYNASSTTSNQKQSYNKHFGSVGNSGRFHSDYSTALNTTNSSTSSTS
NNNNSNQVAASSSSLVNFNLSTIFPEINDKFASSALVPPLTIPPPPIPPS
TSTSTSHSSSSQTLSSSSSSTKAASTIIPSVSSTNFRQAPASTSELLPHS
IAMLGHGNSGQTASMAFSGGGNISGLNFQHPNQQTSSHQ back to topmRNA from alignment at LSalAtl2s1249:141241..147078+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001465-697312 ID=EMLSAT00000001465-697312|Name=EMLSAT00000001465|organism=Lepeophtheirus salmonis|type=mRNA|length=5838bp|location=Sequence derived from alignment at LSalAtl2s1249:141241..147078+ (Lepeophtheirus salmonis)
CAATAACAACGTGAGAATGATGACGATTTTTGAACTGAGAGGAAAACAAA
AAAGAAGCTCTGGAAATGGAATCAATTAAACTTCAGAGACTACTCGTACT
ACAGAAAGATCAATGGAACAATTCCTAGATTGTCGAAATTAATGAATTAT
TTAAGACGTGTTTGTCCGTCCTTCTTTTTGAGAACAAAATGTGAATCCTT
TAGATTGAATAAATCATTATGACAAACAACGTCAACAAAACAGTAAAGTC
AATGAAGAAAAATCCTCTGGATGTGGAGTAAGTTTCGTTTACAGTAGTGT
ATACGTCTTATTTACTTTTGTACCTTTCTTTCACATATTTATTTGTTTTT
CAGAGCAGGGAAATATCGACTTTGGGAAAAAAACCGTCGGGATCGTTTCA
ATGCTGGTCTCGAGACCCTATCCGCCTCCTTGCCAGACTATGAGTCTGGA
GTTAGTAAATGGCCAAAGGCAGATATTGTCGAGCGTGCTATTAATTACAT
CAAGGCACTCCAAGCTCAAAGGATCCCGGATGACCTTCAACGGAGAATTA
AAGGTCTTAAACGACAAAATTCAAAGCTGAGAGAGATTATACGCTCAAAG
TTAGCTAAGGAAATGGATCAAAAAGAGTTCTCTAAGCTCAACTTGCAGGA
AATTCAGTCTCTTATRAATAAATATGGTACATAGTATTCTATCAGAGCTC
ATAATCTGTAGTTACTTGAATTTTGCTCATGTCATTTATTAATTGATTTC
TAATTTTTGCAGAAGAAGCTAAGGCAAACAAAGAGAATCATCCCGAGAAA
CCAGCTTTTTTACCAACTGGAGATGATCATTCATATTCATTGTGTAGTCA
TGATTCATCTGAACCCGATTTAGAAGTAGCTTCTGAAGAAGTAGTTGAAG
AGTCATCGCAAGAAATAACACAAACTACCTTATCATCCTCATCACCTCCA
ACCCCCACAACAACAAATKCCCCATTGGTTAACAGTTTGACTTTAAAACC
AMTTACAATTCTATCCACTCCATCTGGAACACTTCTTAATCCAACTACAT
GGACTGTTCCTCATCATTCCTTTATTGCAATTGATCCCAATCCAATTATT
TCTACTGTACCATACATGATGAGACCCTTAATGAAGTTAGCCTTACCTCG
TTTATCATCTCGTGTTCCTTACATTAAGAAATCTCAGAAAAAGGTTGTGG
AAAATAATGCTAAGAAAAATAATAAAATATGCAAAGGATTGGAAAAAATG
AATACAACTTCTGTGCAAGTGGAAACCTCCCAAGAAAATGTGGAAGAGAT
TATTGATCTAACACCTTCTGAAAAAAGTGATGATTATATGGATGAGTGTG
ACAAAAATGATTCATCAGAGTCGTTAGATTTGCCTTCTACTCATCTAGAT
GAGTTTGACTTAAAAGCTAGTAGTACTCTTCCAGATGCAATTTTAGCATC
AGAGGATCCAGAGGAAATTGACAAGAAAGAGAAAACGGATGGATCCTCCA
AAAAGGATGAAAAAGAATATGTTAAAACCTCAGGTGAGATTGTTGATACT
AAAGACAAATCTGAAGAATCTTCTTCATCGTCACCGGTTACCAAACCTCA
AGAAGTTATTCAAATTAAAAAAAAGAGCCAAGCCGCCTCTGGTAAAAGTT
TTGACAAGTCAGGAGGAAATGGGAAGTCAAAGTCAAAAAGTAGCTACAGT
ATTGCTGCTCTGTGTCAAATTTCTGTCAATATTGGTGGAGACCCTCTTGT
AGCTTCTGAAACAATGGTTAATTCTCCTGGTGTTGTCTCATTGAATTCAT
TCGGGACTGCAAGTCCCTCAGTAKCCCCTGCTCCTTCAACKCCTCCTGCC
CCTACACCACCCATTGACAAGAAGGAAGCGGATAAGGTTATACAGYAACT
KAAGCCTGTACCTCCTTCAGTTATTAAACAAGCTATTGATTCTAAAATAA
CAGGAGTTTGCTTGGCTCCCCCGCCACCTCCTCCTCCTCTTTCAGATTCT
TGCAAAGTAAAATCGATAATGACTCCTCATAATACTATCCCAAAGAAAGA
GATACCTTCTTCTACATGTGTAAAGAAAAATGAGATAAATTTCAAAGAAG
TAGACTCTTCTAAGAAAAGTATAGCTGCTCCTTTACCTCCTACTAAGGAT
AGCAGACTGATAGAACTCCAATATACCAATCATAATAAAAGTATCGAAAA
AGTTCAAAGTTATAAAAAGGATCCTTCCATGGTACAAGAGGTTAAATGTA
GTAGTACTGTTGGTAGCAGCACTCACATCACTGAGAACAGTCAGAATAAT
AGTGGTAGTAACACCACTGCTTCAAATACCAAACAATGGACTCAAGAGTC
TCAAATACATTCCAGTACTCATTATCAACACGCGCTACAGTCCTCTACAG
TAACTCATATTTTCCCTCCTCCTGCTCCTAAAACAAATCCTTGCAACAAC
AATCCATCATTAGCTTTAAAGGAGTCAGGATCTCAGAATATTGGGAAAAA
CAGTCACTACAACAAAGTCGTTTCCACGTCATTGACAGGTGCAGTTCAGT
CACAACAGTCTCATTCACATCATCAACAACAACGACAACAATCCCAAGTG
ATTCACCATCAGCAACAATACATACAGGGCTACACAACCACTACAACTAA
TAATAATAATCAAGCTCCTATACAAAATTCTTTATTACAACAGCCCCAGC
AGCAAATTCACGAGCATCAAGAGTTTCATTACGGGAACAACACAACCATT
CTCAATGAATTCCTCGGGCATCCCCTTCAAACCGCTCTTCCCTCAAGTAC
ACCTTCGGCGAGCAGTGCGGCTCTACAATTTCATCAGGGAACAGGAAACA
GTGGCAGMAGCAGCAATGAAGCCTTACATCGCTACAATTACTCAAGCATA
ACCCCCTCCAATCCATATCAAGCACACCACCACCATCATCATCAATCCAC
CACCGCTATCKCCCCCGCCGCCAATAATCCAGGGACCGACTACCATCATC
ATAATCACCATTCCACAAGTGGTCAAGGAAATAGCAGCACCAATGGTAGT
AGCAGTGCTAACAATCAGGTCCATACAGCGAATCATCAAAGGCAACTCAA
TGAGCAGCTTCAGAGTTCACAAAATGACCAATACTTTCCGTATAATCGAT
CATATTATACCTCGACACAAAATCAGTATGACCTACATGCTTCATCATCC
ACTTCTAAACAACAGCATCCCCAACAACAAAAAGTGTCTCAGCAATTAGT
TCAACAACAACAGCAGCAACTTCTTCAACAGCACCAACAGCAATTGCAAG
CTGTGGCATCTTTACAAATGAACTCTACGGCTATGATGCAGCCAAACACT
TTTTCAGTGAATCAATTAGTAAGCAACGCGAGTAGTAGCAGCAGCAAGAG
MCAGCGAAAAGGCTCGAAGAGAGCCTCCACATCATCTTCTTATGAAGTAT
CGAATAAAAAATCCACTCGGAATCCTGGAGTAGCAAGTACTAACGTTAGT
CAAAGTTCTRCAGCCGATAAAGACTCATCGAGTCGTCCCAAAGAAGATAA
AAAGTTGTTAAAAGTAGGCCCCTCATCTTCACGATCATCTTCTACGTTAT
CTCTTAAAGTCCCTTCTTCTTCCTTACCAAGAAAGGGCAACTACTCAGCT
GAGAGCCTCATCATGGATCCTTCACAGTACACACATAATATTGCTGCCCT
TGAATATCAACAAATGCAGCAGCACCAACACCAGACTAATAAGACAAAAA
TGGATTTTAGCTCAGGTTGGACAACCACKCCCCCCTCAACCACTCCTTCC
ATGATGTTCCCTAGTATCGAGTGCACGACATCTGCTGCAACTCAATTCTG
TTCCATGAGTCCGAGTCCCTTTCCTCAAGACTTGGAGTTTAGCATGTTTA
TCTCTGGAAACGATGCCTCTTCCTATGTTTCTCCCTCGGTGGCGGCTAAA
AACAACTTTAAAGCAAGTGCTAGCGTCGTGGCCTCTGGGCATAACAAGAT
GAATAACAATTCACAACATCACCAAAATTTACTATTTGATAACAGTAATA
TCTTCCCTTTGCCAAATCTTACCCCTCCTACAGCTGTAGAAGATCCTTAT
GCAAGCTTTATGAACTCCTCATCCCACCACCATCACGGGGCATACAACGC
ATCTTCCACCACTTCAAACCAAAAACAAAGCTATAATAAGCATTTTGGAT
CGGTGGGAAATTCAGGGCGCTTCCATTCGGACTATTCGACGGCTTTGAAC
ACTACCAATTCAAGCACCAGTAGTACTAGCAACAACAATAACTCAAATCA
AGTTGCTGCCTCCTCGTCTTCCTTGGTCAACTTCAATCTAAGCACCATTT
TCCCAGAAATTAATGATAAATTCGCCAGCTCCGCACTTGTTCCACCTCTA
ACCATCCCKCCTCCTCCTATTCCTCCTTCAACCTCTACATCCACTTCACA
TTCATCCTCTTCCCAAACCTTATCTTCTTCATCTTCCTCAACCAAAGCAG
CATCGACCATCATTCCTTCAGTTAGCTCTACAAACTTTCGTCAGGCCCCT
GCTTCAACCTCAGAATTATTGCCTCATAGCATTGCTATGCTAGGGCACGG
AAACTCTGGGCAGGTAGGGTGTTCCATCTTTTTGAAAATTGTTTGTAATC
TTTATTATTTTACTATTTTCAAATAGACAGCATCAATGGCTTTTAGTGGC
GGTGGGAATATTTCTGGACTTAATTTTCAGCATCCTAATCAACAAACATC
GTCCCATCAATAAAGAATCTTCATCAAAGTTTGAATCATATAATAATCTA
TTATGTATTTTTATTCAAATAAATATAAGTAAAAAATTTATAAACACCTA
TGTGGCAGTGTGGTATACATTAATCATCTTCGTCCTCCTCTGTAGCACCA
ATAAAGAATCTTACATCAAAGTTTTAATCATATAAAATGCTATTATATAT
TTTTATTCAAATAAATATAAGTAAATAACATATAAACACCCTTATGAAAG
TGTGGTATACATTAATCATCTTCGTCCTCCTCTGGAGCACAATAAAATTC
AAGAAAACTGACTTCCGATTCTACTTTGACAATGAACTGAAAACAAATGA
AGCATCGTTCATCGATGCGTATTGATKCCTTCTCTGACATACCAATGGGT
TTAAATGCATGTTTGAGAAGGGAGTGCCTGTATCTTGCCGTGGTGGGACG
TCGAGCCATGAAGGAAGAAACCATTTCCGAGTCGGAAGGTATATCTATGA
TCACTTTCCCACCAGAGCCCTTTGTTCGAATTTGTAGAAGGGACTCGTCT
GTATAAAAATAAATGAAGTCACTTGTGGAATCAATTTCATTAAAGATATC
TTTGAACTTCTCTGCATTCAAAATAACCTTGAAGATCACTTCATCTCGAC
CGAAACTAAAGTCAAGTGTTTCTTCAGAGTCTTGCGTACGAATAACGGCC
TCAGAGACGGTTCCTTGGTCCTCAATATGGAGACATAGCTCATTGCTGCG
TGTACTATAATGCAATTGAAGTTGTCCCGTCTTTTGAAAAATATTAAGGG
ATTCCAAAATGAGAGGAAGTTGTAGCTGGAATGAAAAATTACTCGTCTCA
TCCTCAGGAAGAAGACTAAARACGTTGAAAAGGTTTCTTTGAACAAAAGC
ATTGCCTTGAAAACACTTTGAATCTTCTACCGTCACTTTGATTCCATTTG
GGCTTATGAAAACATTGCCGTCATCTCGAAAATGGACCGCTTTGATAAAT
GTGAACAGGGTTTTTGCACGAAATAGTTTAGCACGGAATTCCCCACAAGT
CCCATCATCCGCGTTTGTCAGATCCAGTTGGGAAAAAC back to top
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