EMLSAG00000001465, EMLSAG00000001465-684231 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001465 vs. C. finmarchicus
Match: gi|592781973|gb|GAXK01172595.1| (TSA: Calanus finmarchicus comp1351382_c0_seq1 transcribed RNA sequence) HSP 1 Score: 53.5286 bits (127), Expect = 6.830e-6 Identity = 49/160 (30.63%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 20 EAGKYRLWEKNRRDRFNAGLETLSASLPDYESGVSKWPKADIVERAINYIKALQAQRIPDDL--QRRIKGLKRQNSKLREIIRSKLAKEMDQKEFSKLNLQEI----QSLXNKYEEA------KANKENHPEKPAF---LPTGDDHSYSLCSHDSSEPDL 164 E KY WEK RRDRFN L+ L+ LP+Y + W K +IVE N I ++Q++ I + + I+ L + ++L+ +I ++ K+ +EI + + NK +E + N E+ E AF + +DH YS+ SEP+L Sbjct: 3998 EHSKYSKWEKERRDRFNIKLDELATCLPNYNKE-NPWKKVEIVE---NAILSIQSRNIGVNKAHEETIRKLSSEVNQLKNVILEFTGFNKCPEDVFKITSREISLLLREIINKEKETLNSSTLEENLEDE-ESLAFVAKIAQSNDHCYSM---QVSEPNL 4453 HSP 2 Score: 48.1358 bits (113), Expect = 2.505e-4 Identity = 24/35 (68.57%), Postives = 25/35 (71.43%), Query Frame = 0 Query: 441 IAALCQISVNIGGDPLVASETMVNSPGVVSLNSFG 475 IAALCQISVNIG P M NSPGV+SLNS G Sbjct: 3008 IAALCQISVNIGDRP-----EMANSPGVMSLNSVG 3097
BLAST of EMLSAG00000001465 vs. L. salmonis peptides
Match: EMLSAP00000001465 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1249:141241:147078:1 gene:EMLSAG00000001465 transcript:EMLSAT00000001465 description:"maker-LSalAtl2s1249-augustus-gene-0.15") HSP 1 Score: 2906.32 bits (7533), Expect = 0.000e+0 Identity = 1439/1439 (100.00%), Postives = 1439/1439 (100.00%), Query Frame = 0 Query: 1 MTNNVNKTVKSMKKNPLDVEAGKYRLWEKNRRDRFNAGLETLSASLPDYESGVSKWPKADIVERAINYIKALQAQRIPDDLQRRIKGLKRQNSKLREIIRSKLAKEMDQKEFSKLNLQEIQSLXNKYEEAKANKENHPEKPAFLPTGDDHSYSLCSHDSSEPDLEVASEEVVEESSQEITQTTLSSSSPPTPTTTNXPLVNSLTLKPXTILSTPSGTLLNPTTWTVPHHSFIAIDPNPIISTVPYMMRPLMKLALPRLSSRVPYIKKSQKKVVENNAKKNNKICKGLEKMNTTSVQVETSQENVEEIIDLTPSEKSDDYMDECDKNDSSESLDLPSTHLDEFDLKASSTLPDAILASEDPEEIDKKEKTDGSSKKDEKEYVKTSGEIVDTKDKSEESSSSSPVTKPQEVIQIKKKSQAASGKSFDKSGGNGKSKSKSSYSIAALCQISVNIGGDPLVASETMVNSPGVVSLNSFGTASPSVXPAPSTPPAPTPPIDKKEADKVIQXLKPVPPSVIKQAIDSKITGVCLAPPPPPPPLSDSCKVKSIMTPHNTIPKKEIPSSTCVKKNEINFKEVDSSKKSIAAPLPPTKDSRLIELQYTNHNKSIEKVQSYKKDPSMVQEVKCSSTVGSSTHITENSQNNSGSNTTASNTKQWTQESQIHSSTHYQHALQSSTVTHIFPPPAPKTNPCNNNPSLALKESGSQNIGKNSHYNKVVSTSLTGAVQSQQSHSHHQQQRQQSQVIHHQQQYIQGYTTTTTNNNNQAPIQNSLLQQPQQQIHEHQEFHYGNNTTILNEFLGHPLQTALPSSTPSASSAALQFHQGTGNSGXSSNEALHRYNYSSITPSNPYQAHHHHHHQSTTAIXPAANNPGTDYHHHNHHSTSGQGNSSTNGSSSANNQVHTANHQRQLNEQLQSSQNDQYFPYNRSYYTSTQNQYDLHASSSTSKQQHPQQQKVSQQLVQQQQQQLLQQHQQQLQAVASLQMNSTAMMQPNTFSVNQLVSNASSSSSKXQRKGSKRASTSSSYEVSNKKSTRNPGVASTNVSQSSXADKDSSSRPKEDKKLLKVGPSSSRSSSTLSLKVPSSSLPRKGNYSAESLIMDPSQYTHNIAALEYQQMQQHQHQTNKTKMDFSSGWTTTPPSTTPSMMFPSIECTTSAATQFCSMSPSPFPQDLEFSMFISGNDASSYVSPSVAAKNNFKASASVVASGHNKMNNNSQHHQNLLFDNSNIFPLPNLTPPTAVEDPYASFMNSSSHHHHGAYNASSTTSNQKQSYNKHFGSVGNSGRFHSDYSTALNTTNSSTSSTSNNNNSNQVAASSSSLVNFNLSTIFPEINDKFASSALVPPLTIPPPPIPPSTSTSTSHSSSSQTLSSSSSSTKAASTIIPSVSSTNFRQAPASTSELLPHSIAMLGHGNSGQTASMAFSGGGNISGLNFQHPNQQTSSHQ 1439 MTNNVNKTVKSMKKNPLDVEAGKYRLWEKNRRDRFNAGLETLSASLPDYESGVSKWPKADIVERAINYIKALQAQRIPDDLQRRIKGLKRQNSKLREIIRSKLAKEMDQKEFSKLNLQEIQSLXNKYEEAKANKENHPEKPAFLPTGDDHSYSLCSHDSSEPDLEVASEEVVEESSQEITQTTLSSSSPPTPTTTNXPLVNSLTLKPXTILSTPSGTLLNPTTWTVPHHSFIAIDPNPIISTVPYMMRPLMKLALPRLSSRVPYIKKSQKKVVENNAKKNNKICKGLEKMNTTSVQVETSQENVEEIIDLTPSEKSDDYMDECDKNDSSESLDLPSTHLDEFDLKASSTLPDAILASEDPEEIDKKEKTDGSSKKDEKEYVKTSGEIVDTKDKSEESSSSSPVTKPQEVIQIKKKSQAASGKSFDKSGGNGKSKSKSSYSIAALCQISVNIGGDPLVASETMVNSPGVVSLNSFGTASPSVXPAPSTPPAPTPPIDKKEADKVIQXLKPVPPSVIKQAIDSKITGVCLAPPPPPPPLSDSCKVKSIMTPHNTIPKKEIPSSTCVKKNEINFKEVDSSKKSIAAPLPPTKDSRLIELQYTNHNKSIEKVQSYKKDPSMVQEVKCSSTVGSSTHITENSQNNSGSNTTASNTKQWTQESQIHSSTHYQHALQSSTVTHIFPPPAPKTNPCNNNPSLALKESGSQNIGKNSHYNKVVSTSLTGAVQSQQSHSHHQQQRQQSQVIHHQQQYIQGYTTTTTNNNNQAPIQNSLLQQPQQQIHEHQEFHYGNNTTILNEFLGHPLQTALPSSTPSASSAALQFHQGTGNSGXSSNEALHRYNYSSITPSNPYQAHHHHHHQSTTAIXPAANNPGTDYHHHNHHSTSGQGNSSTNGSSSANNQVHTANHQRQLNEQLQSSQNDQYFPYNRSYYTSTQNQYDLHASSSTSKQQHPQQQKVSQQLVQQQQQQLLQQHQQQLQAVASLQMNSTAMMQPNTFSVNQLVSNASSSSSKXQRKGSKRASTSSSYEVSNKKSTRNPGVASTNVSQSSXADKDSSSRPKEDKKLLKVGPSSSRSSSTLSLKVPSSSLPRKGNYSAESLIMDPSQYTHNIAALEYQQMQQHQHQTNKTKMDFSSGWTTTPPSTTPSMMFPSIECTTSAATQFCSMSPSPFPQDLEFSMFISGNDASSYVSPSVAAKNNFKASASVVASGHNKMNNNSQHHQNLLFDNSNIFPLPNLTPPTAVEDPYASFMNSSSHHHHGAYNASSTTSNQKQSYNKHFGSVGNSGRFHSDYSTALNTTNSSTSSTSNNNNSNQVAASSSSLVNFNLSTIFPEINDKFASSALVPPLTIPPPPIPPSTSTSTSHSSSSQTLSSSSSSTKAASTIIPSVSSTNFRQAPASTSELLPHSIAMLGHGNSGQTASMAFSGGGNISGLNFQHPNQQTSSHQ Sbjct: 1 MTNNVNKTVKSMKKNPLDVEAGKYRLWEKNRRDRFNAGLETLSASLPDYESGVSKWPKADIVERAINYIKALQAQRIPDDLQRRIKGLKRQNSKLREIIRSKLAKEMDQKEFSKLNLQEIQSLXNKYEEAKANKENHPEKPAFLPTGDDHSYSLCSHDSSEPDLEVASEEVVEESSQEITQTTLSSSSPPTPTTTNXPLVNSLTLKPXTILSTPSGTLLNPTTWTVPHHSFIAIDPNPIISTVPYMMRPLMKLALPRLSSRVPYIKKSQKKVVENNAKKNNKICKGLEKMNTTSVQVETSQENVEEIIDLTPSEKSDDYMDECDKNDSSESLDLPSTHLDEFDLKASSTLPDAILASEDPEEIDKKEKTDGSSKKDEKEYVKTSGEIVDTKDKSEESSSSSPVTKPQEVIQIKKKSQAASGKSFDKSGGNGKSKSKSSYSIAALCQISVNIGGDPLVASETMVNSPGVVSLNSFGTASPSVXPAPSTPPAPTPPIDKKEADKVIQXLKPVPPSVIKQAIDSKITGVCLAPPPPPPPLSDSCKVKSIMTPHNTIPKKEIPSSTCVKKNEINFKEVDSSKKSIAAPLPPTKDSRLIELQYTNHNKSIEKVQSYKKDPSMVQEVKCSSTVGSSTHITENSQNNSGSNTTASNTKQWTQESQIHSSTHYQHALQSSTVTHIFPPPAPKTNPCNNNPSLALKESGSQNIGKNSHYNKVVSTSLTGAVQSQQSHSHHQQQRQQSQVIHHQQQYIQGYTTTTTNNNNQAPIQNSLLQQPQQQIHEHQEFHYGNNTTILNEFLGHPLQTALPSSTPSASSAALQFHQGTGNSGXSSNEALHRYNYSSITPSNPYQAHHHHHHQSTTAIXPAANNPGTDYHHHNHHSTSGQGNSSTNGSSSANNQVHTANHQRQLNEQLQSSQNDQYFPYNRSYYTSTQNQYDLHASSSTSKQQHPQQQKVSQQLVQQQQQQLLQQHQQQLQAVASLQMNSTAMMQPNTFSVNQLVSNASSSSSKXQRKGSKRASTSSSYEVSNKKSTRNPGVASTNVSQSSXADKDSSSRPKEDKKLLKVGPSSSRSSSTLSLKVPSSSLPRKGNYSAESLIMDPSQYTHNIAALEYQQMQQHQHQTNKTKMDFSSGWTTTPPSTTPSMMFPSIECTTSAATQFCSMSPSPFPQDLEFSMFISGNDASSYVSPSVAAKNNFKASASVVASGHNKMNNNSQHHQNLLFDNSNIFPLPNLTPPTAVEDPYASFMNSSSHHHHGAYNASSTTSNQKQSYNKHFGSVGNSGRFHSDYSTALNTTNSSTSSTSNNNNSNQVAASSSSLVNFNLSTIFPEINDKFASSALVPPLTIPPPPIPPSTSTSTSHSSSSQTLSSSSSSTKAASTIIPSVSSTNFRQAPASTSELLPHSIAMLGHGNSGQTASMAFSGGGNISGLNFQHPNQQTSSHQ 1439 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001465 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001465 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000001465 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001465 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001465 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001465 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001465 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1249:141241..147078+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001465-684231 ID=EMLSAG00000001465-684231|Name=EMLSAG00000001465|organism=Lepeophtheirus salmonis|type=gene|length=5838bp|location=Sequence derived from alignment at LSalAtl2s1249:141241..147078+ (Lepeophtheirus salmonis)back to top Add to Basket
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