EMLSAT00000001526, EMLSAT00000001526-697373 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001526
Unique NameEMLSAT00000001526-697373
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12626supercontigLSalAtl2s12626:379..918 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001526 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001526EMLSAG00000001526-684292Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006665EMLSAE00000006665-715593Lepeophtheirus salmonisexon
EMLSAE00000006666EMLSAE00000006666-715594Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767897auto767897Lepeophtheirus salmonispolypeptide
EMLSAP00000001526EMLSAP00000001526Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001526

>EMLSAP00000001526 ID=EMLSAP00000001526|Name=EMLSAP00000001526|organism=Lepeophtheirus salmonis|type=polypeptide|length=103bp
MFCFSVRLLLQSSKHLTLTLDSLKSTEKSKNFSLSHIDLHWPYEEHSIDN
IKSGVMEMQLYFFDSRKFCHYEDANKSNNKGSIPSIMAISLIFKVNIYIK
RFH
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mRNA from alignment at LSalAtl2s12626:379..918+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001526-697373 ID=EMLSAT00000001526-697373|Name=EMLSAT00000001526|organism=Lepeophtheirus salmonis|type=mRNA|length=540bp|location=Sequence derived from alignment at LSalAtl2s12626:379..918+ (Lepeophtheirus salmonis)
TTTCATTCTAAAGTTTTACATGAAATTGAATATGATTGGAGTGTTTTTAT
GTTTTGTTTTTCAGTACGATTACTACTTCAAAGTTCGAAACATTTAACAC
TGACTTTGGATTCTTTAAAAAGTACTGAAAAGAGTAAGGTAATAAGAGAT
CATAAATTGAATTAATTAAGTTTTTTATATATAAAACATTATTTTTTATC
CAAGAACTTTTCGTTGTCACATATTGATCTTCATTGGCCATATGAGGAAC
ACTCAATTGATAACATTAAATCCGGTGTAATGGAAATGCAATTGTATTTC
TTTGACTCAAGAAAATTTTGTCATTATGAAGATGCGAACAAAAGCAACAA
CAAAGGATCTATTCCTTCAATCATGGCCATTTCACTCATTTTTAAGGTAA
ATATTTATATAAAACGTTTTCACTGACGACATAAATTGCAACATAATTGA
AGGAAGTATCTCGTCATGTTATTTAGGACTGAAGACTGTAGTCCTGTCGA
GTTCAATCCTGCATGTTAGTCTTAAAAACTTATAAAGTTC
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