EMLSAT00000001550, EMLSAT00000001550-697397 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001550
Unique NameEMLSAT00000001550-697397
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s126supercontigLSalAtl2s126:238084..239339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001550 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001550EMLSAG00000001550-684316Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006773EMLSAE00000006773-715701Lepeophtheirus salmonisexon
EMLSAE00000006774EMLSAE00000006774-715702Lepeophtheirus salmonisexon
EMLSAE00000006775EMLSAE00000006775-715703Lepeophtheirus salmonisexon
EMLSAE00000006776EMLSAE00000006776-715704Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775066auto775066Lepeophtheirus salmonispolypeptide
EMLSAP00000001550EMLSAP00000001550Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001550

>EMLSAP00000001550 ID=EMLSAP00000001550|Name=EMLSAP00000001550|organism=Lepeophtheirus salmonis|type=polypeptide|length=314bp
MKDMDVKRLFLISFLIGSLIFEAMGEANLPKECGISKTHGLQGCTPKTSR
IIGGVXAVNGXIPWQASLDVSNGSQYFTTCGAVVXSSQYLLTAAHCLKYK
DEGVMWEAIAKFSTIKVGDTHMFIGNEIYNISSFFIHPNYTILEDENKTI
YKNDIALVQLTSNISFNDNVTAICLPESKFTVCGSENVVISGWGLTEEHN
ETDDHYISFPFNLQRANIQTIAKNDSRCIKSNNGTEIDDTVFCTDSRPKG
SYPGDMGGPVSIEHSGKCVLAGLISNEEYCEKDFQSGLNVNIVHFLEWIY
ETIRTTARDGVSPS
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mRNA from alignment at LSalAtl2s126:238084..239339+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001550-697397 ID=EMLSAT00000001550-697397|Name=EMLSAT00000001550|organism=Lepeophtheirus salmonis|type=mRNA|length=1256bp|location=Sequence derived from alignment at LSalAtl2s126:238084..239339+ (Lepeophtheirus salmonis)
ATGAAAGACATGGACGTAAAAAGACTCTTCCTCATCTCCTTTTTAATAGG
CTCACTTATTTTTGAGGCTATGGGTAATATATAGATTTTTTTTGTAAACT
TTTTATCTTAGATTTCGTAAAATTGAATATAAACTATTATAACAAGTGCA
ATTCCATTATTTATAGGTGAAGCAAATTTGCCAAAAGAGTGTGGCATTTC
AAAGACGCATGGACTACAAGGATGTACTCCGAAGACTAGTCGAATTATTG
GAGGAGTTGRGGCTGTAAATGGARAAATTCCTTGGCAAGCCTCTCTTGAT
GTAAGTAATGGATCGCAGTATTTCACTACATGTGGAGCAGTTGTGKTTAG
TAGTCAATATCTTTTGACAGCAGCTCATTGTTTAAAATACAAGGATGAGG
GAGTTATGTGGGAGGCAATCGCAAAATTTTCAACGGTATTGAACCTTTAT
TTTTTATACGATTTTAATTAATCCAATATATTTAGATCAAAGTAGGCGAC
ACCCACATGTTTATAGGAAATGAGATATATAATATAAGTTCATTTTTTAT
TCATCCAAATTACACTATATTAGAAGATGAAAATAAAACTATCTACAAAA
ATGACATTGCCCTGGTACAACTTACGAGTAATATTTCTTTCAATGATAAT
GTTACGGCGATTTGCCTTCCAGAATCAAAGTTCACAGTCTGTGGGAGTGA
AAATGTCGTGAGTAAGTATACTATACCTAATATATTTAATTATAGTATAC
KGAATGAGTAAATCAAAAAATATTTTCACAGTTAGTGGATGGGGATTAAC
AGAAGAACATAATGAAACTGATGACCATTACATAAGTTTTCCATTTAACT
TACAAAGAGCTAATATCCAAACTATTGCTAAAAATGATTCTCGCTGTATA
AAAAGCAATAATGGAACCGAAATTGATGACACAGTATTTTGTACTGACAG
TCGACCTAAGGGATCCTACCCAGGGGATATGGGAGGACCAGTCTCAATTG
AACATTCGGGTAAATGTGTATTGGCTGGGCTAATTTCGAATGAGGAATAT
TGTGAGAAAGATTTTCAAAGTGGTTTAAATGTGAATATTGTTCATTTCCT
GGAATGGATTTATGAAACAATAAGGACTACAGCTCGTGATGGTGTCTCAC
CTTCTTAATAAAAAACAATCTAAGGAAGTTGTTCAATTATTATTTTTAAA
TAAAATAAACATAATAAATAAGAATCAATTTTAAAAATAAATTTAAAATA
ATGCAT
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